KEGG   Anas platyrhynchos (mallard): 101795657
Entry
101795657         CDS       T02816                                 
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X1
  KO
K14321  nucleoporin-like protein 2
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101795657 (NUP42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101795657 (NUP42)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101795657 (NUP42)
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH_4 zf-CCCH zf-CCCH_DUS3L zf-CCCH_2 Cytochrome_P460
Other DBs
NCBI-GeneID: 101795657
NCBI-ProteinID: XP_027306732
Ensembl: ENSAPLG00000012786
UniProt: A0A8B9QT02
LinkDB
Position
2:complement(130735338..130742005)
AA seq 411 aa
MAICQFFLQGRCRFGDKCWNEHPRGGGGRQQGAARGGGGGGGGGGGWGASTQRYSSVIQP
SAFRSSAWGGSREHGGGRSADFSQNRFSALSSQSLGDGYRDEDEKLLECIVKDMEIWESS
GQWMFSSYSPMKDKPNITGFQDFSPEELRLECYNCRANSSAQTYLNSVQQLVKGWKDRLL
QLKTLNATTKVALLTELKNTVMQPSPSFGFGGQQTSSFGASSFPVNSSSTSASNFSFKTS
SSLFGASSGNAPAFGSSSAGCNPPAFGAMSSTSVSHPPAFGNPSAPSAASFSFKLSSEPT
SSFGSSGFSGFGSSSTVNSSSSAPLPAFGAFNAAAQASPSHSSSTLFGQAATASGHNVTP
VPSVLTNGGTADKLFTSKSELTAEELKQFEAKRFIMGKIPLRPPPLELLNI
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggccatctgccagttcttcctgcagggccgctgccgcttcggcgacaagtgctggaac
gagcacccccgcggcggagggggccgccagcaaggcgctgccagagggggaggaggagga
ggaggaggaggaggaggatggggcgcctcgacgcagaggtacagcagcgttatccagccg
tcagccttcaggagcagcgcgtggggcggcagccgggagcacggcggcggcaggagcgcc
gacttctctcagaacaggttctccgccttaagcagccaaagcctcggcgatggctacagg
gatgaagacgagaaacttcttgaatgtatagtgaaagacatggaaatttgggaatcctca
ggacaatggatgttttcatcttactcacctatgaaagacaagcctaatattacaggcttt
caagatttctcgccagaagaattgcgtctggagtgttacaactgcagagcaaacagtagc
gctcagacctatttaaattccgtccaacaattagtaaaaggctggaaagacaggctgctg
cagttgaagactttaaatgcaacaacaaaagtagcattgctcactgagttaaagaacacg
gtcatgcagccatcaccttcatttggatttggaggacagcaaacatccagcttcggggcg
tcaagttttcctgtgaacagcagcagtaccagtgccagcaatttctcctttaaaacaagt
tccagtctctttggtgcctcatcaggaaatgcccctgcttttgggagctcttctgcaggc
tgcaatcctcctgcatttggtgcgatgtcttccacgagcgtttcccatcctcctgctttt
ggcaacccatcagctccctctgcagcctccttctcgtttaagctttcttctgaaccaacc
agcagttttggatcttctgggttttcaggctttggcagttcttctactgtgaactcttca
agcagcgctccacttccagcttttggagcttttaatgcagcagcacaagcgtccccctca
cattcgagcagcactttgtttggtcaggctgccactgcctctggacataacgtaacacca
gtgccttctgtgctcacaaatggtggtacagcggataagttatttacatccaagagtgaa
ttaacagcagaggagttgaaacagtttgaagcaaaaaggtttatcatgggaaagatacct
cttaggccaccaccgctagaacttttaaatatttaa

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