Anas platyrhynchos (mallard): 101796145
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Entry
101796145 CDS
T02816
Symbol
TSEN2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apla03016
]
101796145 (TSEN2)
Enzymes [BR:
apla01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
101796145 (TSEN2)
Transfer RNA biogenesis [BR:
apla03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
101796145 (TSEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
101796145
NCBI-ProteinID:
XP_038042054
Ensembl:
ENSAPLG00000014992
LinkDB
All DBs
Position
13:18543603..18555671
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AA seq
466 aa
AA seq
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MAEAVFRPPRRKRRVFESYEAPFPVDVGGEDFRMCQAEIMNNNVIVRNPEDIERLYNKGY
FGKGILSKSRPVYSISNPYLVSKWQGANVNMPIITSKKYQCRVQWAKSILQEQGLDDCSI
TEILKNYTKPLELPLLEKEGAEQTGDSCNSTGPNAENTELSRHSSADTGSVVDPESCSPE
CHNEGHQKVCSEGGPASDSVAAFGPKEQKPTDLKEAAEVSCQKHSFCVRCSCKAKESTEH
KSCEMAESNECAPEYVLVEEEDESGLCPESDSAHEQENLVKKEKLVCRKNPFRIFEYLQL
SLEEAFFLVYALGCLTIYYGEEPLTILKLWEFFSEVKPSFKTIYMAYHYFRSKGWVPKVG
LKYGTDLLLYRKGPPFYHASYSVIAELVDDTFEGSLRRPFTWNSLSGLNRTTVNASKELM
LCYFIRPSDMTEKEMSTPECLKRIKVQELIVTRWVSSRERSEQDDL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagttttccgtcccccgaggaggaaaagaagagtgtttgagtcgtacgaa
gccccctttcccgtggatgtaggtggggaggatttcagaatgtgccaggctgaaattatg
aacaacaatgttattgtgaggaaccccgaggacattgagcggctctataacaagggttat
tttggaaaaggtattctttcgaaaagtcgaccagtgtacagcatttccaatccttacctg
gtttctaaatggcaaggtgctaacgtaaacatgcctataattacatcaaaaaagtaccag
tgtcgtgttcagtgggctaaaagtattctgcaagagcaaggacttgatgactgctccatt
actgaaattcttaaaaattacaccaagcctcttgagttgccacttctggaaaaggaggga
gctgagcaaactggtgatagttgtaacagcacgggcccaaatgcagaaaatacagagctt
tccagacattcttctgcagacactggaagtgtagtagatcctgagtcctgtagtcctgag
tgccataatgaaggccaccagaaggtctgttcggaaggaggtccagcttcggattccgtg
gctgcatttggccctaaagaacagaagcccactgacttgaaagaggcagctgaagtgtct
tgccagaagcatagtttttgtgtgcgttgcagctgcaaggctaaggagagcactgaacac
aaatcttgtgagatggctgagtcaaacgaatgtgctccagaatatgtcttggtggaggag
gaagacgaaagtggtttatgtcctgaaagtgactctgctcatgagcaagaaaatcttgtc
aagaaggaaaaactggtgtgtagaaaaaatccatttaggattttcgaatatttgcaactc
agcttggaagaggcttttttcttggtgtatgctctgggatgtttaactatttattacggt
gaggagcccttaacaattctgaagctatgggaatttttcagtgaagtgaagcccagtttt
aaaactatttacatggcatatcattacttccgcagtaagggctgggtccccaaagttgga
ctgaagtatggaaccgatctcttgctatatcgaaaaggaccacccttctatcatgcaagt
tactctgtcattgctgaattagtggatgacacttttgaaggttctcttcgcagaccattc
acctggaattccttgtctggcttgaacagaacaactgttaatgcttctaaggaacttatg
ttatgctatttcattagaccatctgatatgactgaaaaagagatgtccacaccagaatgt
ttgaaaagaattaaggttcaggaacttattgtaactcgttgggtgtcttcccgtgagcgt
agtgagcaagatgacctttaa
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