Anas platyrhynchos (mallard): 101799793
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Entry
101799793 CDS
T02816
Symbol
CNGB1
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101799793 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apla04040
]
101799793 (CNGB1)
Ion channels [BR:
apla04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101799793 (CNGB1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101799793
NCBI-ProteinID:
XP_038041557
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All DBs
Position
12:complement(11336612..11364591)
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AA seq
1247 aa
AA seq
DB search
MLGWIERVVPQPPAPCLMEESPPAPAPEPAKVPARKGSSPRDAVDSTRVQETEKKVEFAV
PEDVVPASASVFESVGSSVLSWLSQGLEKVIPQPVQAPGTLQALGKSFETSIDVPDQTEV
QVIKDEEEDALEITPFDPEEDELDGCETDTGLDTGAEEWWEQRVLSWLVQGFERMVPQPE
MPKKPEPEPKEERHKAAAGGTKGTKTQAKVKGNVSAAPSIPGTVEPVAAEGQPEPVATVL
PRPLAGDSSSMFGWFVQGLEKVMPQPVSREKQDTQGAAAAAFSPVEEIHIVPVEVVETDL
VVEDIDDDWSDEVAHEPTAWDGVAELVAQGRPLPPIEEELQEEETRLCSCPLSAAEEEQE
EQEEQQEQEEEEEEEEEAEEKKEEEEVEESVGALLQSPCLPTDEGLEDAFFAEEALSFAQ
LEEAEISDLEGAFVQVEDKTVEVTETDAEASDALSFSSSPMSPATELLLPPASPSLLPES
ERLELSTPFFAMRSNPLFSPLGLGHCLTVGVEDVDGGGDAAEEDGTCLPLPTPGDPHMLV
VPGAVPAKKLPAPTDNLDEAPASWDELQKDSLPERIGSATSQSSAIINDRLQELVKLFKE
RTEKVKEKLTDPDVTSDDESPSASPSKPAPPAPPPPPPAEAPPGDKAADDEHYCEMLCCT
FKCQPWMARLKSYQFPSSIDPLTNLMYVLWLFFVVLAWNWNCWLIPVRWAFPYQTPSNIH
FWLLVDYLCDLIYLLDIIVFQTRLQFVRGGDIISDKKAMKENYLHSQRFKMDVVCLLPLD
FFYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILSKAYIYRVIRTTAYLLYSLHVNSCLY
YWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFTGV
FAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKTVQNRVKTWYEYTWQSQG
MLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYV
CKKGEIGREMYIIQAGQVQVLGGPDGKTVLVTLKAGSVFGEISLLAAGGGNRRTANVVAH
GFANLFILDKKDLNEILVHYPESQKLLRKKAKKMLKNNNKPRDEKGQPVSPLIIPPKPDT
PKLFQAALAAMGKTGGKGRLAHLRWKLQELKAMQAEQDPSFSPIPPKSPVHRRSPTASPK
ACTPPGEEICSKSSDNLVAIRVISAAQEDEEVLAAEISQKEEEEEGK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctggattgagcgggtggttccccagccccccgcgccatgcctgatggaggag
agccccccagccccagccccggagccagccaaggtgccagcacggaagggcagcagcccc
agggatgctgtggacagcacacgtgtgcaggaaactgagaagaaggtggaatttgcagtg
cctgaggacgtggtccccgcatcagcatcggtgtttgagagtgtggggagcagtgtgctc
tcctggctctcccaggggctggagaaggtgatcccacagccagtccaggccccggggaca
ctgcaggcactcgggaagagctttgagacgagcatcgatgttcctgaccagacggaggtc
caggtcatcaaggatgaagaggaggatgctctggagatcacccccttcgaccctgaggag
gacgagctggatggctgcgagacggacacgggtttggacacgggtgcagaggaatggtgg
gagcagcgtgtgctgagctggctggtgcagggcttcgagagaatggtgccgcagccggag
atgccgaaaaagcctgagccagagccgaaggaggagaggcacaaagctgcggcaggaggc
acaaaagggactaaaacccaggcgaaggtgaaagggaacgtttcagctgccccgagcatc
ccgggaacagtggagccagtagctgctgaggggcagccagagcctgtggccaccgtcctc
cctcgtcccctggctggggacagcagcagcatgtttggatggtttgtccaggggctggag
aaggtgatgccacagcctgtgagcagggagaagcaggacacgcagggagcagcagcggca
gccttcagccccgtggaagaaattcatatcgtccctgtggaggttgtggagacagaccta
gtcgtggaggacattgatgatgactggagtgatgaagtagctcacgagccaacggcctgg
gatggcgtggctgagctggtggcccagggtcgtcctctgccccccatagaggaggaactt
caggaagaagagaccaggctgtgctcctgccccctgagtgctgctgaggaggagcaggag
gagcaggaggagcagcaggagcaggaggaggaggaggaggaggaggaggaagcggaggag
aagaaggaagaggaggaggtggaggagagcgtgggagccctgctccagtctccttgcctc
cccaccgatgaggggctggaggacgccttctttgcagaagaggccctcagcttcgcgcag
ctagaagaagctgagataagtgatctggaaggtgctttcgtacaggtggaagacaagacg
gttgaagttaccgaaactgatgctgaagcttcagatgccttgtcctttagcagctcccca
atgtccccagctaccgagctgctgctgcctcccgcatccccgtccttgctgccagaaagc
gaaaggctggagttgtcaaccccgttttttgcaatgaggagcaatcccctgttcagcccc
ctagggctcggtcactgcctcaccgtgggtgttgaggacgtggacggcggaggtgatgct
gcagaggaggatggcacctgcttgccgctgcccacccctggtgacccccacatgctggtg
gtgcccggtgctgtgccagcgaagaagctgccggcccccacggacaacctggatgaggca
ccggcgagctgggatgagctgcagaaggacagcttgcccgagcgcatcggttcggccacc
agccagagcagtgccatcatcaatgaccggctccaggagctggtgaagctcttcaaggag
cgcacagagaaggtgaaagagaagctgaccgaccctgatgtcacctccgatgatgagagc
ccttcggcatccccttccaagccagcgcccccagcaccaccaccgccccccccggcagaa
gcgccaccaggggacaaggcagcagatgatgaacactactgcgagatgctgtgctgcacc
ttcaagtgccagccctggatggcccgcctgaagagctaccagttccccagcagcatcgac
ccgctcaccaacctgatgtatgtgctgtggctcttcttcgttgtcctggcctggaactgg
aactgctggctgatccccgtccgctgggctttcccctaccagacgccatccaacatccac
ttctggctgctcgtggactacctctgcgacctcatctacctgctggacatcatcgttttt
cagacccgcctgcagtttgtgcgggggggagacataataagtgacaaaaaggccatgaag
gagaactacctgcattcacagcgctttaagatggatgtggtatgcctccttcccctggat
ttcttctacttcaaagtcggtgtcaacccgctgctgcgttttccccgctgcctgaagtac
atggccttcttcgagttcaacaaccgccttgaggccatcctgagcaaggcatacatctac
agggtgattcggactactgcctatttactgtacagcttgcatgtgaactcctgcctctat
tactgggcatcagcctatgaaggactgggctctaccacctgggtctatgatggggaagga
aacagttacatccgctgctactactgggcagtcaaaaccctcatcaccatcgggggcctg
ccagaccccaagacactcttcgagattgtcttccagctgctgaactacttcacgggtgtc
tttgctttctccgtcatgatcgggcagatgagagatgtggttggtgctgctactgctggg
caaacttactatcggagctgcatggacagtactattaaatacatgaacttctacaaaatc
cccaaaaccgtgcagaaccgtgtcaaaacatggtatgagtacacatggcaatcacaaggc
atgctagatgagtctgagctgctggtgcagctgccggacaagatgcggctggacatcgcc
attgatgtgaactacaacatcgtcagcaaagtggccctcttccagggctgtgacaggcag
atgatcttcgacatgctgaagcggctgaggtcggttgtctacctgccaaatgactacgtc
tgtaagaagggggagatcggccgcgagatgtatattatccaggctggacaagtgcaggtg
ctggggggacccgacggcaaaaccgtgctggtgacgctgaaagctggatctgtgtttgga
gaaataagcttgctggcagcgggaggaggaaatcggcgaacagcaaacgttgtcgctcat
ggatttgctaatcttttcattttggataagaaggacttgaatgagattttggtgcactac
ccagagtctcagaagttgctgcgtaagaaggccaagaaaatgctgaaaaacaacaataaa
cccagagatgagaaagggcagcccgtatctccgctgatcattcccccaaagcctgacacg
ccgaagctcttccaggcggccctggctgccatggggaagacgggaggcaaagggcgtctc
gcacacctccggtggaagctgcaggagctgaaggcaatgcaggcagagcaggatcccagt
ttcagtccaatcccaccaaagtcaccagtgcaccgcagatctcctactgcttcccccaaa
gcctgcacccctccgggagaggaaatatgctcaaaatcttctgataatttagtcgctatc
cgtgtgatttcagcagcgcaggaggatgaagaagtacttgctgctgagatttcacagaag
gaagaagaggaagaagggaaatga
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