Anas platyrhynchos (mallard): 101799887
Help
Entry
101799887 CDS
T02816
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04510
Focal adhesion
apla04512
ECM-receptor interaction
apla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101799887 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101799887 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101799887 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
apla00535
]
101799887 (COL9A3)
Proteoglycans [BR:
apla00535
]
Extracellular matrix (ECM) proteoglycans
Others
101799887 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101799887
NCBI-ProteinID:
XP_005029067
Ensembl:
ENSAPLG00000003290
LinkDB
All DBs
Position
21:13874723..13910529
Genome browser
AA seq
675 aa
AA seq
DB search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NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattccccactcttgggctccttgtcctttgtcagctattagccaccacctca
gctcagagagtaggaccacaaggccctcctggaccccgaggaccccctggaccatctggc
aaggacggcatagatggcgagccgggccctcctggtttgccaggcccaccagggccaaag
ggtgcaccaggaaagcctggagcagctggtgaagctggattgcctggccttcctggagta
gatggtttaacgggaactgatggcccacctggccccaatgggcctccgggagaccgtggt
gcattaggaccttccgggccgcctggacaagctggtaaaggactaccaggacctccaggg
cctccaggacccagtgggcttccaggtggaaatggatttcggggtcctcctggtccttat
ggtcttccaggattcccagggcctcccggaccacccggacctcctggccttccaggcatc
tttcctgatggcggtggggacatccagtgcccagctctgtgcccaccgggtcctccaggt
cctccaggaatgccagggttcaagggacacactggtcacaaaggagaacctggtgaaata
ggaaaagaaggagagaagggcaaccctggccctccaggtcctccaggcattcctggcagt
gttggcctacagggcccaagaggactaagaggcctccctggcccaatgggtccagctggt
gacaggggtgacattggtttcagagggccacctggaatcccaggacctccagggaaagct
ggagaccaaggaaacaaaggacctcaaggattcagaggacccaaaggtgacactggtaga
cctggaccaaaaggaaacccaggggcacgtggactcataggagaacctggcatacctggc
aaggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgcatg
ggtgctcctggagagaaggggccaaacggacttcctggcctgcctggaagagcaggtatt
aaaggctcaaagggtgaaccaggcagtcctggagagatgggagaggcaggtccctctgga
gagccaggcatccctggtgatgtcggtattcctggtgagagaggtctgccgggtcccaga
ggagcaactggcccgcttggtctccaaggcccgataggagcccctggtgtccgaggcttc
cagggtcctaaaggtgccagtggggaacctggccttcctggtccaactggaattcgggga
gagtttggtgacaggggccctaccggtgttactggtcccaaaggtaaccagggcattgct
ggagcagacggccttccaggtgacaaaggagaactgggtccctatggtccccccggccaa
aaaggagagccaggaaaaaggggagaacttggtcccaaaggtgtccagggacccaacggg
acagctggagttccagggattccaggacacccagggcccatgggccatcagggggagcaa
ggcgttcctggcatcacaggaaaacctgggcctcctggcaaagaggccagtgaacaacat
ataagagaactctgtggggagatgataaatgatcaaattgcccagttagctgctaacctg
aggaagcccttgtctccaggaatgacgggtcggcctggcccggctgggccccccggtcct
cctggggctacgggaagtgttgggcatcctggtgctcgtgggcctcctggctacaggggg
ccaacaggagagctcggggatcctggtcccagaggtgacactggtgaaaagggagataaa
ggacctgttggacaaggtatcgatggacccgacggcgatcaaggtcttcaaggacttcct
ggtgtacctggaattagtaaaaatggtcgtgacggtgctcagggtgaacctggtcttcca
ggggatcctggtattcctggtgctattggggctcagggaactccaggaatatgtgacaca
tcggcttgcatgggagctgttggagcatcaacttccaaaaaatcataa
DBGET
integrated database retrieval system
