Anas platyrhynchos (mallard): 101802238
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Entry
101802238 CDS
T02816
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03020
RNA polymerase
apla04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101802238 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101802238 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101802238 (POLR3A)
Enzymes [BR:
apla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101802238 (POLR3A)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101802238 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2120
Motif
Other DBs
NCBI-GeneID:
101802238
NCBI-ProteinID:
XP_027316503
Ensembl:
ENSAPLG00000015878
EnsemblRapid:
ENSAPLG00030001765
LinkDB
All DBs
Position
6:13109811..13147377
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRESDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHAPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPVVSTFLQSFETAIEHNKEVESLLGRAQENLNPLVVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLC
CRDSFLQTLTETGYEKYNEEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
ESTPPRRPLIFDNNEFHIPIVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgagagagcgacgtcgccaagaagataagccacatctgcttt
gggatgaagtcccccgaggagatgcggcagcaagcgcacatccaggtggtcagcaagaac
ctgtacagccaggacaaccaccacgccccgctgcagtacggcgtgctcgaccaccgcatg
ggaaccagtgaaaaagaccgcccctgtgaaacctgtggaaaaaacctagctgactgtttg
ggacattatgggtacattgacttagaactgccctgttttcatgttggatacttcaaagct
gtgataggcatcttacagatgatctgcaaaacctgttgccgtatcatgttgtcagtggaa
gaaaaaaaacagtttttggattacctgaagcgaccaggccttacgtatcttcagaagaga
gggctaaagaagaaagtgtctgaaaagtgccgaaagaaaaacacttgtccttactgtggt
gcctttaatggaactgtgaagaagtgtggtttgttgaaaataatacatgaaaagtataag
accaataagaaagtggtagatcctgtggtatccacttttctccagtcctttgaaactgcc
atagaacataacaaagaagtagaatccttattgggaagagctcaggaaaatttgaatccg
ttagtagtattgaacctctttaaaagaatcccagcagaagatatccctctgcttctaatg
aacccagaagcaggtaagccttcagatttaatcctcacacgactcttagtgccaccactg
tgtatcagaccctctgttgtgagcgacttgaagtctggcaccaacgaggacgacttgaca
atgaaactgacagagatcattttcctcaatgatgtaataaaaaagcacaggatatcagga
gccaaaacacagatgataatggaagactgggacttccttcagttgcagtgtgccctgtac
attaacagtgagctctcgggaattcctctgaacatggcacctaaaaaatggaccagaggt
tttgttcaaagacttaagggaaagcaaggtcgttttagaggtaatctgtctggaaagcga
gtggatttctctggcagaacagtcatttccccagatcctaatttaagaatagatgaagta
gcagtgcctattcatgttgctaaaatattaacttttcctgaaaaggttaacaaagcaaat
attaattttatgaggaaacttgtccggaatggtcctgatgttcatcctggagccaacttc
attcagcaaaggcacacacagatgaaaagatttttgaaatatggaaaccgagagaagatg
gcccaggagctgaagtttggtgatatcgtggagcgacatcttatagatggtgatatagtc
ctgttcaaccgacaaccttctcttcataagctgagcatcatggctcacattgctagagta
aaacctcataggacattcagatttaatgaatgtgtctgtacgccatacaatgcagacttc
gatggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcactt
gttttaatggggactaaagcaaacttggtaacaccaagaaatggagaacctctcattgct
gctattcaagatttccttacaggtgcctatcttcttacactaaaagataccttttttgat
cgagccaaagcctgtcaaatcattgcttctatcctggttggcaaggatgaaaaaattaaa
gttcgtcttccacctccagcaattttgaagcctgtaacactctggacaggaaagcaggtt
ttcagcctcattctcaaacccagtgatgactgtcctgtgaaagcgaatctgcgaaccaag
ggcaaacagtattgtggcaaaggggaagacctgtgttacaatgattcttatgtcacaatt
caaaacagtgagttaatgagtggcagcatggacaaaggaaccttaggttctggatccaag
aacaatatcttttacattttgctgagagactggggacaggtagaagctgcagatgccatg
tcacgactagccaggcttgctcctgtctatctgtctaatcgtggcttttcaattggaatt
ggtgatgtcacaccaggtcagggcctgctaaaagctaagtatgaactcctgaatgctggc
tataagaaatgtgatgagtatattgaagctctgaatactggaaaactacagcagcagcct
ggttgtacggcagaagagacactagaggctttgatccttaaagaactctcagttatcaga
gatcatgctggcagtgcctgtctcagagaactcgacaagagcaatagtccccttattatg
gctctctgtggttctaaaggctccttcattaacatatcccagatgattgcatgtgtaggt
caacaggctatcagtgggtcccgtgttcctgatggatttgagaacaggtccttgcctcat
tttgagaagcattctaagcttccagcagcaaaaggctttgttgctaacagcttctattct
gggttgactcccactgaatttttttttcacacaatggctggtcgagaaggtctggttgat
acagctgtaaaaacagctgaaactggatacatgcagaggcggctggtaaaatctcttgaa
gatctttgttcgcagtatgatttgacagtcagaagttctactggtgacattattcagttt
atttatggaggagatggcttggatcctgcagctatggaagggaaagatgaaccacttgaa
ttcaagcgggttctagacaatatcagagctgtatatccatgccgaagtgaaccagccctt
agtaaaaatgaattggtgttaacatctgaatctatcatgaagaagaatgaatttctttgc
tgccgagacagttttctgcagacattaactgaaacaggttatgaaaaatataatgaggaa
atcaaaaaattcatcaaaggtgtttctgagaaaataaaaaaaacaagggacaagtatggg
atcaatgacaacggcacaacagagccacgagttttgtatcagttggataggattacacca
acacaactggagaagtttctagagacatgtagggacaaatacatgagggcacagatggag
cctggttctgcagtaggagccctttgtgcacagagtattggtgaacctggcacacagatg
acactgaagactttccattttgcaggggttgcttcaatgaacattactttgggtgtgcca
agaatcaaagaaattattaatgcttcaaaggcaattagcacacctattataacagcacag
ttggacaaagatgatgatcctgattttgctcgtctggttaaaggaagaattgagaaaaca
ttattaggagagatttcagaatatattgaagaagtgtttcttccagatgattgtttcatc
ctagtgaagctgtctctagagcgtattagactactgagattagaggtgaatgcagagact
gtgcgctactcaatttgcatatctaaactcagagtgaagcctggggatgttgctgtccat
ggagaagcagttgtatgtgtgacccctcgtgaaaatagcaagagttcaatgtattatgta
ttgcagtccctgaaagaggaattaccaaaggttgtagtgcaaggtataccagaggtttcc
cgagctgtcatccatattgatgaacaaagtggtaaggaaaaatacaaactcctagttgaa
ggtgataatctgcgagctgttatggctactcatggagtgaaaggcacaaaaacatcttct
aacaacacttatgaggtagaaaaaacactaggaattgaagctgctcggaccaccattatc
aatgagattcagtatacaatggtgaaccatggtatgagcattgacaggagacatgttatg
ttactgtctgatctaatgacttacaagggtgaagtgctgggcattaccaggtttggactg
gcaaaaatgaaggaaagtgtgttgatgctggcttcttttgaaaagactgcagaccatctc
tttgatgctgcctactttggacagaaggattctgtttgtggtgtttctgaatgcatcatc
atgggaattccaatgaatattggaacaggactttttaaacttttgcacaaagcagacaaa
gaatcaacacctcctaggaggcctctgatatttgataataatgagtttcatattccaatt
gttacatag
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