Acanthaster planci (crown-of-thorns starfish): 110981309
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Entry
110981309 CDS
T05078
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110981309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110981309
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110981309
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110981309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Nup49_C
Motif
Other DBs
NCBI-GeneID:
110981309
NCBI-ProteinID:
XP_022094484
UniProt:
A0A8B7YMJ9
LinkDB
All DBs
Position
Unknown
AA seq
2575 aa
AA seq
DB search
MNLDSHSLALSQVTNLVSNLTKKNYKQSVSELSRLVSQQGPEGDRHLLRCLFSYVDFSGD
GKNATKEFHQLHVQLLTQECTALFAKPNFVCTLCHALDNPLHQQKSLKPSAQLFSQISKV
LKLSRVQEVVLGLALTHSSKADTRTHALQFVKQKLPDLLRSYIDSDIRSPQEGGLADVSA
EVLHLLLTHLLHSSKDQLGIAPPQREAFLKTITKDFPPDQVPVVLVPLLYSDTQDIRMDR
IVNDNTNLPKGVMDISLADMMQEIGYSCCATMDECRKTLVQYGVGSLTASAVARVIGMMA
KSHTGLTENMPLQAITGNSVWSEGKDKAEPGVQPLVPTTWNVDVFVEVVKDLAPHLNFRE
VLFELDHPGFVLKDAQGLRLVKNALLRGLQGLKEASPIDALYRVWKNTDGQLSWIQLALA
NPDVFCFADYPCHQVVIDILKAQPEEDNREVATWKSLDLVETLLKLAEAGKYDQVKNLFN
FPIKHCPDMLLLGLLQVQPMWTTLRHELISTLMPIFLGNHPNSGIVLHYAWHGQGQSVTI
RQIVMHSMAEWYMRGENDQTRLSRILDVAQDLKALSLLLNATPFAFVIDLACLASRREYL
KLDKWMTDKIREHGEPFVQTCVTFLKRRAPQVIGGLAPEPKELPGGGKTGVLPPETIGTM
LACLQACASSVAPELADTIMTMVANCSNLLKSRPPPGVIKSQVGISSLSPGIGPQMEAMG
GMSGLGNTTPTTPGIHNFPNNPLSSAFGNIQSAAAAAGSQKPFPPLTGGTMGGSSLGGSA
LGSGSLGSSSLGGGLGSGGLGSSGFGGGLSANGLGAGSGSSLGGSLGSGFGSNSTGGFGS
GSSLGGSFGGSSAGGFGSSSGSGLGGGFGSSLGSGLGGGLGGGLGSGGLGGGLGGSLGSG
FGSGLSGGLSSGLGGTLGGGLGSGLSGGLGGGLGGLSGGTNIQSNPHELRGNSTLPSVAG
DPFGRQAGSSTPGSGFGNQTQPAINQPAKSNTGAIKPGDISNIWPELSQTFAQEIDDEAN
GYFQQIYNQPPNPVMSVDEVLQMLKRFKDSQVKKEREVFMCMLRNLFEEYKFFPQYPERE
LLITACLFGGIIEQGLVTYMALGIALRYVLEALRKPHGSKMYYFGIAALDKFKTRLKDYP
QYCQHLSAIPHFGEFPQHLTEYVQFGVMSRDPPQRVPTPSSTAATTASTAATVVATTLST
SNATSTAPTTTTAAVTKPATKAGTTAPSIANTTNIDTLLVATPKDEVINEPPESVQDKVA
FIFNNLSQSNQPQKCEELKELITEDYLEWLSQYMVMKRASIEMNFHPLYSNFVDQLKKGN
LNDLLIKETLRNIEVLLSSDKSDANFSDRTLLKNLGHWLGMLTLAKNKPILQIDLDLKSL
ILEAYHLGQQELLYVVPFVAKVMESCHKSRVFKPPNPWTMAIMGVLVELHQEPNLKLNLK
FEVEVLCKNMGLDIADVKPSNYLRDYANLAHLKEKLSGSKKGIEEPKAVPVAQQASVPPN
TSTPVPTSTGSMASLVTDTMPTPAMSTVTTPTVVPTSGAPATPQTATPVPQFSFHDLNTT
SLSGVAPHIAINAQIPLFQQHPQLRSCVRPILERAVQELVHPVVDRSIKIALTTCEQIVR
KDFALDPEENRMRIAAHHMVRNLTAGMAMITCREPLLTSISNNFKTACITALKGGTAQTK
ELIEQAATVVAQENVELTCCFIQKCAVEKAIPEMDRRLATEIELRKHARNENRRYCDPVV
LTYQAERMPEQIRLKVGGVPAGQIAVYEEFARSIPGFQPTPEANQPPGFLVKPVQQSYAT
DEITQIYDKCVSEIEQHLHALIQSSSAQSQHVQVLHTLLEAVVLARNSREIVTALALLQK
AVEGLLEGYTPQTMEPELALRYRDCHILVLKSLQDQRAYGPQWTNKQVTRVVCETRSDHK
YNLDAVEQLFRAHLMNMQTFDMQLAQSMENGLNYTAVAFAMNVVRRYLIEEKQSNILNEA
DLFNTLHILARIANQTPNPPEGLQHLIEVVRQNHDPAFLDKAPGGPTSMMHSGISQAREF
DDPPGLREKTEYLLREWVNMYHSPASGKDSTKAFSAFVNQMHQQGILKTDDLITRFFRIC
TELCVDLCYRALAEQALTPTLTRAKCFHTLDAFVRLIALLVKHSGDASNAVTKINLLNKV
LGIVAGVLLQDHEVRNTEFQQLPYHRIFNMLLLELNAPEQILEAINYQIMTAFCNALHVL
RPSKAPGFVYSWLELISHRIFIARMLAMLPQQKQGWPMYAQLLIDLFKFMAPFLRSAELP
KYTALLYKGCLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSAFPRNMRLPDP
FTPNLKVEMLTDITQPPRIMTNFAAMIQPASFKKDLDSYLKTRSPVTFLSELRSHLQVSQ
EPGQRYNTALMNALVLYVGSQAIAYIHSKNSTPSMSTIPHSSHMDIFQNLVVDLDTEGRY
LFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAMQEQITRVLLERLIVNRPHPWGLLI
TFIDLIRNPSFKFWNHEFVHCAPEIEKLFESVARSCMQQKSQAPVMNREQVEAHE
NT seq
7728 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggactcccattcgttggccttgtctcaagtcacgaaccttgtgagcaatttg
acgaagaaaaactacaagcagagtgtctcggaactttcccgtcttgtcagccagcagggg
cccgaaggggacaggcatctgctgcgctgcctcttctcatacgtcgacttcagcggtgat
ggtaaaaacgccaccaaggaattccaccagctgcacgttcagttactcactcaggagtgc
accgcactctttgccaagcccaactttgtttgtaccctgtgccacgccctcgacaacccc
ctccatcagcagaagagcctcaagccttcagcacagctattttcccagatcagcaaggtc
ttgaagctaagccgtgtccaggaagttgtcctaggcctggcccttacccactcctccaag
gcggacacacgaactcatgctttgcagtttgtcaagcagaaactgccagacttactgcgg
tcgtacatagatagtgacatacgcagcccacaggagggcggtctcgcggacgtctctgcc
gaggtcttgcacctgctgctgacccacctgctccacagctctaaggaccagttgggcatt
gccccaccccaacgagaagcattcctcaagacaatcacaaaggactttcctccggaccag
gttcctgtggtccttgtgccccttctgtacagtgacacgcaggatatcaggatggatagg
atcgttaacgacaataccaacctgcctaaaggagtgatggacatctccctggccgacatg
atgcaggagatcggctacagctgctgcgccaccatggacgagtgccgcaagaccctggtc
cagtatggtgttggcagcctgactgcctcagcagtggcccgcgtcatcggcatgatggcc
aagtcgcacacgggcctgacagaaaacatgcccctacaggccatcacaggcaacagcgtc
tggagcgaaggcaaggacaaggcagagcctggcgtccagcccctagtccccaccacctgg
aacgtggatgtctttgtagaggtggtcaaggacctggccccacacctgaacttccgggag
gtgctcttcgagctggaccacccgggcttcgttctgaaggacgcccagggcctgcgcctg
gtcaagaatgcgctcctccgaggactgcagggactgaaggaggcgtcccccatcgacgcg
ctgtacagggtgtggaagaacacggatggacagctgtcttggattcaactggccttggcc
aatccggacgtcttctgctttgccgactatccttgccaccaagtggtcatcgacatcctg
aaagcgcagccggaagaagacaacagagaggtggcaacatggaagtcgctggatctcgtc
gagaccctactgaagctggccgaggctggcaagtacgatcaggtcaagaatctcttcaac
tttcccatcaaacattgtcccgacatgctgctccttggactcctacaagttcagccaatg
tggacaacactgcgacatgagctcatctccaccttaatgcccatcttccttggtaatcat
cccaactctggcatcgtgctgcactacgcatggcatggacagggtcagtcggtgaccatc
cgtcagattgtgatgcactccatggcggagtggtacatgcgaggggagaacgaccagact
cgtctctcccgcatcctggacgtggcccaggacctcaaggctctgtctctgctcctcaac
gccacaccctttgcctttgtcattgacctggcctgcctggcgtccaggcgggagtacctg
aagcttgacaagtggatgacggacaagatcagggagcacggggagcccttcgtccagacc
tgcgtgacattcctgaagcgccgcgccccccaggtgataggcggcctggccccagagccc
aaggaactaccagggggaggcaagacgggcgtcctgcctccagagaccataggcaccatg
ctggcctgtctgcaagcctgcgcaagttcggttgcccctgagctagccgataccatcatg
accatggtagccaactgctccaatctcctcaagtccaggccaccgccgggcgtcatcaag
tcccaggttggcatctcgtcactctcccctggcataggacctcagatggaggcaatgggt
ggcatgtctggacttggcaacacgacaccgaccactcctggaatccacaacttcccaaac
aatcctctcagctccgccttcggtaacatccagtcagcggctgctgcagctggctctcag
aagccgttccctcccttgactggggggacaatgggcggcagctcactgggtggaagtgcc
cttggtagcgggagtctagggtccagcagtctgggtggagggttggggtcagggggtctg
ggctcctcgggattcggagggggcttaagtgccaatgggctgggcgcgggctccgggagc
agccttgggggcagtcttgggagcgggttcggcagcaactccaccggagggtttggcagt
ggttccagcctgggcggcagctttgggggaagctcggccggtggcttcggatccagctcg
ggctcgggtcttggtggagggtttgggagctccttggggagcgggcttggcgggggactc
ggtggggggttgggctctggtgggcttggaggaggcctgggtgggagcctagggagcggg
tttgggagcggcctgagtggcggcttaagcagtggactagggggaacgttaggaggtggg
ctgggtagtggtctcagtggtggactaggaggtggtcttggaggtttgagtggaggcacc
aacatccaatcaaacccacatgaacttcgaggaaacagtacccttccatctgtagcaggg
gaccccttcggcaggcaagcaggtagcagtacgcccggatcagggtttgggaaccagacc
caacctgccatcaaccagccagccaagtccaacactggtgccatcaaaccaggtgacatc
tccaacatctggcctgagctgagccagacctttgcacaggaaatcgacgacgaggccaac
ggctacttccagcagatctacaaccagccgcccaatcccgtcatgtcggtggacgaggtc
ctgcagatgctgaaacgattcaaggactcacaagtcaagaaggagagggaggtcttcatg
tgcatgctgcgtaacctttttgaggagtacaagttcttcccccagtatccagagagagag
cttctcatcacggcttgtctctttggcggcatcattgagcagggactagtgacgtacatg
gccctaggtatcgcccttcgctacgtcctagaggctctacgtaagccccacggcagcaag
atgtactacttcggcattgcagcgctggataaattcaagacgcgcctgaaggactatccc
cagtactgccagcatctctccgcaattcctcactttggggaattcccgcaacacctgacg
gagtatgtccagtttggtgtgatgtctagagatccacctcagcgcgtccctacaccctcc
agcacggcggccacgacagcatcaacggccgccacggttgtcgccaccacgctgtccacc
tcaaacgccaccagcacggcccccaccacaaccaccgccgcggtcaccaagcctgctacc
aaggccggcacaacagcgccatccattgccaacacaaccaacatcgacaccctcttggtg
gctacacccaaggacgaggttattaatgagcctccagagagtgtgcaggacaaagtcgct
tttatcttcaacaatctctcccagtccaaccaaccacagaagtgtgaggagttgaaggaa
ctgatcacggaggactacctcgagtggctgtcccagtacatggtcatgaagcgggccagc
atcgaaatgaacttccaccccctctactccaactttgtggaccagctcaagaagggaaac
ttgaatgacctcttgatcaaggagacactgaggaacatcgaggtcttgctcagctcggac
aagagtgatgccaacttctccgaccgtaccctcctgaagaatttgggccactggctgggg
atgctgacgctggccaagaacaagcccatcttacaaatcgacctagacctgaagtccctg
atcctggaggcctaccacctgggccagcaagagctgctctacgtggtgccgttcgtggca
aaggtcatggaatcctgccacaagagccgggtcttcaagccacccaacccctggaccatg
gccatcatgggcgtgctggtggagctccaccaggagcccaacctcaagctcaatctcaag
tttgaggtggaggtgctgtgcaagaacatgggcctggatattgctgatgtcaagccgagc
aactatctcagggattatgccaacctggcgcatctcaaggagaagctctcaggttccaag
aaggggattgaggagccaaaggctgtccctgtagcccagcaggccagtgtgccccccaac
accagcacgccggtgcccaccagcaccggttccatggcctccctggtgacggacaccatg
cccactccggccatgtccaccgtgaccacgccaacagtggtcccgacctcgggtgcgccc
gctacaccccagacggccactcccgtgccccagttcagcttccacgatctgaacacaaca
tcactgtctggggtggctcctcacattgccatcaatgcgcagatacccctgtttcagcag
catccgcagctccgcagctgtgtgcggcccatcctggagagagcagtccaggaactagtc
caccccgtggtggaccgctccatcaagattgccctgacgacttgcgaacagattgtcaga
aaggactttgccttggatcccgaagagaaccgcatgcgcatcgccgcccaccacatggtg
cgtaacctgacggctggcatggcgatgatcacgtgtcgtgagcctctcctgaccagcatc
agcaacaacttcaagacggcctgtatcactgctctgaagggaggcaccgctcagaccaag
gagttgattgagcaggctgccaccgtggtggcccaggagaacgtagagctgacctgctgc
ttcattcagaagtgtgccgtggagaaagccatcccagaaatggatagacgtctggcaacg
gagattgagctgcgcaagcatgctcgcaacgagaatcggcgctactgcgatccggtcgtg
ttgacataccaggctgagagaatgccagaacagatccgtctcaaggtcggtggtgtgccg
gctggccaaatcgccgtctacgaagaatttgcccgcagcattcctggattccagccaaca
cccgaggctaatcagccacctggattcctggttaaaccagtacagcaatcctacgccacg
gacgagatcacccagatctacgacaagtgcgtctcggagatcgagcagcacctgcacgcc
ctgatccagtcctcctcggcccagagccagcatgtgcaggtgcttcataccctgctggag
gcggtggtcctggccaggaactcgcgggagatcgtcacagccctggctctcctgcagaag
gctgtggaaggccttctggagggctacaccccacagacaatggagccggagctggccctg
cgataccgtgactgtcacatactggtgctgaaatcacttcaagaccaacgggcctatggc
cctcagtggaccaataagcaggttactagagtcgtgtgcgaaacgcgtagtgaccataag
tacaacctagacgccgtggagcagctcttccgagcccacctcatgaatatgcagaccttt
gacatgcaactggcccagtcaatggagaatggcctcaactacacggcagtggcctttgcc
atgaatgtcgtccgccgctacctgattgaagagaaacagagcaacatcttgaatgaggct
gacctgttcaacaccttgcacatcctggcacgcatcgctaaccagacgcctaacccacct
gaaggtctgcaacacctgattgaggtggtccgccagaaccacgaccccgccttcttggac
aaagcccccgggggacccacctctatgatgcactcgggcatctcccaggccagggagttt
gacgacccgccaggcctgagggagaagacagaatacctcctgagggagtgggtcaacatg
taccactcgccggccagcggcaaggacagcaccaaggccttctcggcttttgtcaaccag
atgcaccaacagggcatcctcaagacagacgacctgatcacccgcttcttccgcatctgc
acggagctgtgcgtggacctgtgctaccgggctttggctgagcaggcattgaccccaacc
ctgaccagagccaagtgcttccacaccctggatgccttcgtccgcctgatagccctcctt
gtcaagcactctggggatgccagcaatgccgtgaccaagatcaaccttcttaacaaggtt
ctgggcatcgtagccggcgtcctccttcaagaccatgaggtgcgtaatacggagttccag
cagctgccctaccatcgcatcttcaacatgctcctcctggaactcaacgctcccgaacag
atcctggaggccatcaactaccagatcatgacagccttctgcaatgccttacacgtcttg
cggccttccaaagcaccaggctttgtctactcctggctggagctgatctctcatcgtatc
ttcattgcaaggatgctggccatgctgccccagcagaagcaagggtggcccatgtacgcc
cagctcctgatcgacttgttcaagttcatggcaccattcctacgcagtgctgagctgccc
aagtacacagcactactttacaagggctgtttgagggttctgctggtcctcctccacgac
ttccccgagttcctctgcgactaccactacggcttctgcgacgtcatcccacccaactgc
atccagatgcgcaacctgatcctgagtgcgttccctcgcaacatgcggctgcccgacccc
ttcacccccaacctgaaggtggagatgctgacggacatcacccagccgccccgcatcatg
accaactttgccgccatgatacagccggcttccttcaagaaggacctggactcgtacctc
aagacccgcagccctgtaacgttcctctcggagctgcgcagccacctgcaggtgtcgcag
gagcctggccagcgctacaacacggcgctgatgaatgccctggtgctgtacgtgggctcg
caggccatcgcctacatccatagcaagaacagtaccccctccatgagcaccatcccccac
tcctcccacatggacatcttccagaacctggtggtggacttagacacggaagggcggtac
cttttcctgaatgcaatagccaaccagctgagatatcccaacagccacacccactacttc
agttgtaccctcctgtatctctttgccgaggccaacacagaggctatgcaagagcagatc
accagggtgctactggagcgattgatagtgaatcgaccacacccttggggccttctcatc
accttcatcgatctcatcaggaatcccagcttcaagttctggaatcatgagtttgtccac
tgcgcaccggagatcgagaaattgtttgagtcagtcgccaggagttgcatgcagcagaaa
agccaggcccccgtcatgaatcgagagcaggtggaggcccacgagtag
DBGET
integrated database retrieval system
