Acanthaster planci (crown-of-thorns starfish): 110984110
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Entry
110984110 CDS
T05078
Name
(RefSeq) exosome complex component RRP45-like
KO
K03678
exosome complex component RRP45
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110984110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110984110
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110984110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110984110
NCBI-ProteinID:
XP_022099628
UniProt:
A0A8B7Z1Z2
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MKETPLSNVERDFLTAAIKSGKRIDGRETYDYRNIKITFGTERGCCEVQLGQTRVLAQVS
CETVEPRSTRPTEGELYVNLELSPMASPGFEPGRLSEYGVELNRLLERCLKDSRAVDMES
LCVVAGEKVWQIRVDVHVLNHDGSILDCGSIAAIAALSHFRRPDVTVIGESVTIHTTEDR
DPVPLSVHHMPVCISFAFFEQGKYLLVDPTFKEESVMEGNMVVAMNAHRELCTVQMTGGM
LLLKDQIMRCSQIAVVKVAELTELIKKALSNDAKARSEGKKCGHAESLSRQRITTSVAQP
QPVDTTESVETAQDVLDRAQEPVHDSGLTPAVFDTGFGGIGEGAANTWLIPEAENEVDED
EMQDAEEEGEEVDTMDDGITEDAVRRKEASKSQPRVAEGYHSDSSEEAETVTLNEADMVG
FNKRIPVEPSADLDLSVALKTSQTIAATTAPPAKKKTKRKGKKNK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagacacctttgtcaaacgtcgagagggacttcttaacagcagcaatcaagtca
ggaaagagaattgatggacgggagacatatgactacagaaatattaagataacatttggc
acagaacgaggatgctgtgaggttcaacttggccagacaagggttcttgcacaggtctcc
tgtgagacagtagagcccaggagtactcggccaacagagggggagctttacgtgaacttg
gagctgtccccgatggcatcgcctggcttcgagccaggaagattgtcggagtatggcgtt
gaactgaacaggctattggagagatgtctgaaagactccagggctgtggatatggaatca
ctgtgtgttgtagctggagaaaaggtgtggcagattcgtgttgatgtccatgttttgaac
cacgatggcagcatcttggactgtgggagtatcgcagcgattgctgcactgtcccacttc
aggaggcccgacgtcactgtcatcggggaaagtgtcacaattcacaccactgaggataga
gaccctgttcccctgagtgtccaccacatgcccgtgtgtatttcatttgccttctttgaa
caaggcaagtacttactggttgatcccaccttcaaggaggagtcggtgatggaaggcaac
atggtggtggccatgaatgctcacagggaactgtgcactgtccagatgacaggagggatg
ctcctattgaaggaccagatcatgaggtgttcacagattgctgttgttaaggtggctgag
ttaacagagctcatcaagaaagcactgagtaatgatgccaaagcaaggtcagaaggcaag
aaatgtggccatgctgaatctctttcaaggcagagaataacgacgtctgtagcacagccg
cagccagttgacacgaccgagtcagtggagactgctcaagatgtcctcgacagagcccag
gagcctgtccacgactcaggcttgacaccagcagtgtttgatactggcttcggaggtatt
ggagaaggggccgccaacacgtggctcatcccggaggctgagaatgaggttgatgaggac
gagatgcaggatgctgaggaagagggtgaggaggttgatacaatggatgacggcataaca
gaggatgctgtaaggagaaaagaagccagcaaatcacagccaagagtggcggagggatat
cacagtgatagcagtgaggaggctgagacagtcacattaaatgaggcagacatggttggg
ttcaataagagaatacctgtggaaccttcagctgatctggatctctcagttgccctcaag
acatcccagacaattgctgccacgacagccccccctgccaagaagaaaaccaaacggaaa
ggaaagaagaacaagtaa
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