Agrilus planipennis (emerald ash borer): 108740914
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Entry
108740914 CDS
T07419
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apln04040
]
108740914
Ion channels [BR:
apln04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108740914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
108740914
NCBI-ProteinID:
XP_018330934
UniProt:
A0A1W4XF15
LinkDB
All DBs
Position
Unknown
AA seq
2062 aa
AA seq
DB search
MSEASDALSEEERCLFRPFTRESLAAIETRIAEEHAKQKELEKKRAEGETGFGRRKKKKE
IRYEDEDEDEGPQPDPTLEQGVPIPVRLQSSFPPELASTPLEDIDPYYSNQRTFIVVSKG
KDIFRFSATNAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKRFPRDGSWGNLTDENWKRFVSNETNWFKKDDDYPLCGNSSGAGQCQEGYVCLQGFGGN
PDYGYTSFDTFGWAFLSAFRLMTQDYWENLYQQVLRSAGPWHMLFFIVIIFLGSFYLVNL
ILAIVAMSYDELQKKAEEEEAAEEAIRTAEEQSRLKQLENPHQNKRRPDPGGGNEGNIHE
ELPPRHSPSASSCQSYELFVEQEKIQEDNNKEKMSIHSEGLDSVSEQRRIRTNPTKMRKV
SATSLSLPGSPFNFRRGSRGSHQFTARNNRRIMPPGDRKPLVLSTYLDAQEHLPYADDSN
AVTPMSEENGAMVVPMYYASLGSRHSSYTSHASRMSYTSHNDLLGGLGGNGRIITKEEQL
KGRLKKQTMAPNYEEFNHKPHCGNYNGPTGTVIEGKIKNLDNPFVDGNQKQPIVDMMDVM
VLNDIIEQAAGRQSRASENGVSVYYFSANDDDEDEPTLKERLLESTMKIIDTLCVWDCCW
LWVQLQKYVALIVFDPFVELFITLCIVVNTLFMALDHHDMNKDMEKALKSGNYFFTATFG
IEATLKLIAMSPKYYFQEGWNIFDFIIVVLSLLELGLEGVQGLSVLRSFRLLRVFKLAKS
WPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFRDHTLPRWN
FTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSN
FGSSNLSAGTADNDTNKIAEAFDRIGRFIDWIKLNVTHFAKKIRFKLTNQISDQPPGEGP
SNSWNQDTRDGGLELTGEEILADGMIFPHKKSPKDKLEVTIGDGMEFTIHGDSKANLKKV
KNNINKSKTIGNSILEHSDFNAYFDDDLISNKSYGSHKNRFKDGSHKGSITVTEPEDQEE
KKDASKEDFEAANASESEQEESHLKRALVHEIEAEEGPPESAEDCFPESCYKKFPFLAGD
DDSPFWQGWANLRFKTFELIENKYFETAVITMILLSSLALALEDVHLQNRHILQDILYYM
DRIFTVIFAFEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFIASLCGAGGIQAFKTM
RTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFK
CIDGNKSYVSYEIIPDKNACQAENYTWENSPMNFDHVGKAYLCLFQVATFKGWIPIMNDA
IDSREQIDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMF
MTEDQKKYYNAMKKMGSKKPMKAIPRPQWKPQAIVFEIVTNKKFDMIIMLFIGLNMLTMT
MDHYQQKETFTKILDYLNMIFIVIFTTECLMKIFALRYHYFTEPWNLFDLVVVILSILGL
VLSDIIAKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFL
VMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEEC
DQPNPEIGDPGNCGSATIGIAFLLSYLVISFLIVINMYIAVILENYSQATEEVQEGLTDD
DYDMYYEIWQNFDPEGTQYIRYDQLSDFLDVLEPPLQIHKPNKYKIVSMDIPICKGDMMY
CVDILDALTKDFFARKGNPIDEAGEITEVQQKPVTPGYEPVSSTLWRQREEYSARLIQNA
WRKYKQRRSGETEQIDAAQPQDDDGGDEDGEGTGEGEGDGEGEPAARQTAVLVESDGFVT
KNGHKVVLHSRTPSLSSRSADV
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagcctctgacgcattgtccgaagaggaacgctgcctattccgtccattcaca
cgtgaatcgttggctgctatcgaaacccgtatcgctgaagaacatgcaaagcagaaagag
ctcgaaaagaaaagagctgaaggagagaccggttttggacgaaggaaaaagaaaaaagaa
attcggtatgaggacgaggacgaagatgaaggcccccaacctgatcctaccctcgagcag
ggagttcccataccagtacggttacagagcagttttcctccggaactggcaagtactcca
cttgaggacatcgatccatactatagcaatcagagaacgtttatagtagtcagtaaaggc
aaagatattttccgatttagtgctacaaatgctatgtggatacttgacccgtttaatcca
atccgtcgagtggcaatttacattctcgtacatcctctgttttccctcttcattattact
acaattctcgtcaattgcatcctcatgattatgccaaccacacccaccgtagagtcaaca
gaagtaattttcactggcatctacacattcgagtcagctgtgaaagtgatggcaagaggt
tttatacttcaaccgtttacctaccttagagatgcatggaactggctcgacttcgtagtg
atagctttagcctatgttactatgggaatagacctgggaaaccttgctgccttgagaaca
ttcagagtacttcgagctctgaaaaccgttgccattgtgccaggtttgaagactatcgta
ggagctgtaatagaatcagtaaaaaatctgcgagatgtgataatattaacaatgttttct
ttatctgtgttcgctcttatgggtttacaaatttacatgggcgttttaacgcaaaaatgt
attaaaagatttccgagagacggctcgtggggtaacctaaccgacgagaattggaagaga
ttcgtcagtaacgaaacaaactggttcaaaaaggacgatgactatccactgtgcggaaac
tcatcaggagcaggacaatgtcaggaaggttacgtttgcctgcaaggattcggcggtaat
cctgattacggatacacgagtttcgacacattcggttgggcctttttatctgcatttcgt
ctcatgacgcaagattattgggaaaatttgtatcagcaagttttgagatcggcgggaccg
tggcatatgttattttttatagtgattattttcctgggttctttctatctagtgaacttg
atcttggctatcgttgcgatgtcatacgacgaactccagaagaaagcggaagaagaggaa
gcagcagaggaagctattaggacggctgaagagcaatcgagattaaagcaacttgaaaac
cctcatcaaaacaaaaggcgtccagatccaggtggaggtaacgaagggaacattcacgaa
gaattaccgccccgacattccccttcagcctcgtcctgccaaagttacgagctcttcgtc
gaacaagagaagatacaggaagataacaacaaagaaaagatgagcattcattctgaagga
cttgattccgtgagtgagcagagacggattcgtactaatcccaccaagatgcggaaagtc
agcgctactagtttaagcctcccgggatcgccttttaattttcgaagaggttcaaggggt
agccatcaatttacagctcgcaataatagacgaattatgccaccgggtgatcgtaaaccg
ctggtgttatcgacatatctggatgctcaagaacacctcccgtatgccgacgattctaac
gccgttactccaatgagcgaagaaaatggagcaatggtcgttccaatgtattatgctagt
ttagggtcaagacattcttcttatacttcccatgcttctcgaatgtcctatacttcacac
aacgatctcctaggaggtcttggtggaaatggccgaatcataaccaaggaggaacagttg
aaggggcgcctgaagaaacagacaatggctcctaactatgaggaattcaatcacaaaccg
cactgcggaaactacaatggaccaacaggtacagtgattgaaggtaaaattaagaatctt
gataacccattcgtggacggtaaccaaaagcaacctatcgtcgacatgatggacgtaatg
gttttgaatgacatcattgaacaagcagcaggaagacaaagtcgagctagtgaaaacgga
gtttctgtttattatttctcagccaatgatgatgatgaagatgagccaacattaaaagaa
cgtttattagaaagcactatgaaaattatagacacactgtgtgtctgggattgctgttgg
ctgtgggttcaattgcaaaagtatgtagcgctgatagtttttgatccgttcgtcgaacta
ttcatcacactttgcatcgtcgttaataccctatttatggcactcgatcaccacgacatg
aacaaggacatggagaaggcattaaaaagtggaaattacttcttcacggcaacgttcggc
attgaagcaacattgaagttgattgcgatgagtccgaaatattacttccaagagggttgg
aatattttcgacttcatcattgttgttttatcccttttggagctgggattggaaggcgtc
cagggattgtcagtgttgcgatctttcagactgctaagagtgttcaaactggctaaatcc
tggccaacgctgaatcttctgatttcgattatgggacgaacgatgggagctttgggcaac
ctgacgtttgtcctatgtattatcatattcatatttgcagtaatgggcatgcaacttttc
ggcaagaactacaccgataatgtggacagatttcgtgatcacaccttaccacgatggaac
tttacagattttatgcattcttttatgatagtatttagagtgttgtgtggagaatggatc
gaatcgatgtgggattgtatgttagtaggagacgtatcatgtattccatttttcttagca
acggtagtcataggaaatcttgtggttcttaatctcttcttggccttgctcttgagcaac
tttggttcgtcaaatctttcagcaggtactgctgataacgacaccaacaagattgcagaa
gcattcgatcgtattggccgttttatcgattggattaaactgaatgtaacgcactttgct
aaaaagatacgcttcaaactcaccaatcaaatttctgaccagccgccaggtgagggaccg
tccaacagttggaatcaagatacgagagacgggggcttggaactaactggagaggaaata
ctagctgatggaatgatctttccccacaagaagagtcccaaagataaattagaggtgaca
ataggcgacggcatggaatttacgattcacggtgattccaaagcaaatctaaagaaagtt
aaaaataatataaacaaaagtaaaactataggaaattctattcttgaacatagcgatttc
aatgcttatttcgacgacgatttgattagtaataaatcttatggtagtcataagaaccgt
ttcaaagacggaagtcataaaggaagtatcactgtcacagaaccagaagaccaggaagaa
aagaaagacgcgagtaaagaagactttgaggctgccaatgctagtgaaagtgaacaggaa
gagagtcatttaaaacgagcccttgtccatgaaatagaagcggaagaaggacctccagag
tccgcggaagattgcttcccggaatcctgttacaaaaagttcccttttttagcaggagac
gacgattcgcccttttggcagggttgggctaatctaaggttcaaaacattcgaactcatc
gagaacaaatactttgaaacagcagtcattacaatgattctactaagtagtttagctcta
gcgttagaagacgttcacttacaaaacaggcatattctacaagacattttgtactacatg
gatagaatattcactgtcatatttgcatttgaaatgttaatcaaatggctcgccctaggg
ttcaaagtctacttcacaaacgcgtggtgttggctagatttcgtcatagtcatggtatca
cttataaatttcatagcatctctctgcggtgcaggtggaattcaagcgttcaaaactatg
agaacgcttcgagctctcagacctctaagggctatgtcaagaatgcagggaatgagggtt
gttgtaaacgcacttgtgcaagccataccatccattttcaatgtactcctcgtgtgtttg
atattttggctgattttcgccattatgggtgtacaactatttgccggaaaatacttcaag
tgtattgatggtaacaaatcatacgttagttacgaaataattcccgataaaaacgcatgc
caagctgaaaattacacttgggaaaattctcccatgaatttcgaccacgtcggcaaagct
tatttatgtctattccaagtagcaacattcaaaggatggattccaataatgaacgacgct
attgattcaagagaacaaatcgataaacaacctataagagagacaaatatctacatgtac
ctttactttgttttctttatcatttttggatcattcttcaccctcaatctatttatagga
gtaatcattgacaattttaacgaacaaaagaaaaaggcaggtggatcgttggaaatgttc
atgaccgaagaccaaaagaagtattacaacgccatgaagaaaatgggttccaaaaagcca
atgaaagctataccccgaccacagtggaaacctcaagcgatagtgtttgaaatagtgact
aataagaagtttgacatgattatcatgttgtttattggtttgaatatgttgacgatgaca
atggaccattaccaacaaaaggaaaccttcacgaaaattttagactacctcaacatgata
tttattgttatttttaccaccgagtgcctcatgaagatttttgcattgagatatcactat
tttacggaaccttggaatttgtttgatttggtggttgtcatactatctatattaggtttg
gtgctaagcgacattatcgctaagtatttcgtatctccgacgctgctcagagtggtacgt
gttgcgaaagtaggtcgagttttacgtttggtaaagggagccaaaggcataaggacactc
ttgtttgccttggccatgtctctgccggctttgttcaacatttgcttattacttttcctg
gttatgttcatctttgcaatattcggaatgtcattcttcatgcacgtcaaagacaagagc
ggacttgatgacgtatacaatttcaaaacttttggacaatcaatgatactactatttcag
atgtcaacatccgctggatgggatggtgttttggatggtataataaacgaagaagaatgt
gaccaaccgaacccggaaataggagatccaggaaactgcggcagtgctaccattggaata
gcgttcttgctcagttatctcgttatatcattccttattgtcatcaacatgtacattgcc
gttatcttagaaaactattctcaagcaaccgaagaagtccaagaaggtcttacagacgac
gattacgacatgtattacgaaatctggcagaacttcgaccccgaaggaactcaatatatc
cgatacgatcaactatcagatttcttagacgttttagagccaccattacaaatccacaaa
ccgaacaaatacaaaattgtatcaatggacattcccatttgcaaaggagacatgatgtat
tgcgtagatattttagatgctttaaccaaagatttctttgccagaaaaggcaatcctatc
gatgaggctggtgaaataaccgaagtgcaacagaagccagtaactcccggttacgaacca
gtaagttcgacgttgtggcgccaacgcgaggaatattcggccagattaattcaaaatgca
tggcgaaaatataagcagagacgcagtggtgaaactgaacaaattgatgcagctcaacca
caagatgatgatggcggagacgaggatggtgaaggtacaggtgagggtgaaggtgacggt
gagggtgaacctgcagcaagacagacagcagttcttgtagaaagtgatggtttcgttacg
aaaaatgggcacaaagttgttttacacagccgtacaccaagtcttagttcgcggtcggca
gatgtatga
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integrated database retrieval system
