Agrilus planipennis (emerald ash borer): 108741055
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Entry
108741055 CDS
T07419
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108741055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108741055
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108741055
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
108741055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108741055
NCBI-ProteinID:
XP_018331169
UniProt:
A0A1W4X518
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MSLCEAEKTFILHGVEENFRIDGREREDYRPMEVEIGIISHAFGSARLRLANTDVLVAVK
IEVDTPYPEKPSQGKLDFFVDCSANATPDFEGRGGEDLATGISNSLSDAYRSSKAFDLKK
LCIMKGQKCWKLLVDILLLECGGNLYDAVSLAVKAALWNTRVPGVKSVGIDGKNVELNVS
ERLNDCVPLDVSGAPVMVTVCKIGEYCVVDPSAAEEKCSSAALVVAVSQGNITTVLQGSA
GSLHPTTLMDSLGLGVEVANQLNIALMETLQSAPPHFDVGFLK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttgtgaggcagaaaaaacgtttatattacacggtgttgaggagaattttaga
atagatggacgagaaagagaagattatagaccaatggaggttgaaattggtattatttcg
catgcttttggttcggccaggctaagattagctaatacagacgtattagtagctgtaaaa
attgaggttgacaccccttaccctgaaaaaccttctcagggaaaactggacttttttgtc
gactgttctgccaatgcaactcctgattttgaaggaagaggaggtgaagatttggctact
ggtatatcaaatagtttgtcagatgcttataggtcatcaaaagcgtttgacttgaaaaag
ttgtgcattatgaagggtcagaaatgttggaaattgctagttgatattcttttattagag
tgtggtggaaatttgtatgatgctgtgtcattggctgttaaagctgctctatggaataca
cgtgttcctggtgttaagtctgttggtattgatggaaaaaatgtcgaactaaatgtttct
gaaagattaaacgattgtgttcctctcgatgtgtcaggtgcccctgtaatggtaactgtg
tgcaaaataggcgaatattgtgttgtggatcctagtgctgctgaggaaaaatgctcttca
gctgctctagttgttgctgtatctcaggggaatattacaactgttctacaaggcagtgca
ggatcgttacatcctacaacattaatggatagtttaggtttaggagttgaggttgctaat
cagcttaatattgctcttatggaaacacttcaatctgctcctccacattttgatgtggga
tttttaaaataa
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