Alpha proteobacterium HIMB5: HIMB5_00007060
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Entry
HIMB5_00007060 CDS
T02250
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm00260
Glycine, serine and threonine metabolism
apm00630
Glyoxylate and dicarboxylate metabolism
apm00670
One carbon pool by folate
apm00680
Methane metabolism
apm01100
Metabolic pathways
apm01110
Biosynthesis of secondary metabolites
apm01120
Microbial metabolism in diverse environments
apm01200
Carbon metabolism
apm01230
Biosynthesis of amino acids
apm01240
Biosynthesis of cofactors
apm04981
Folate transport and metabolism
Module
apm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HIMB5_00007060
09102 Energy metabolism
00680 Methane metabolism
HIMB5_00007060
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HIMB5_00007060
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HIMB5_00007060
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HIMB5_00007060
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HIMB5_00007060
Enzymes [BR:
apm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HIMB5_00007060
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Ubiquitin_5
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
AFS47464
LinkDB
All DBs
Position
complement(637282..638595)
Genome browser
AA seq
437 aa
AA seq
DB search
MSSEAKYLNNDYQNFFEKRLSESDPELFKAINDELIRQQNHIELIASENIVSQAVLEAQG
SVLTNKYAEGYSGKRYYNGCEHVDVAEELAIERLKKLFNCKFANVQPHSGAQANGAVFLA
LLKPGDTFMGMSLNSGGHITHGLKISMSGKWFNPIGYDVDKETGLIDYDEVERLALENKP
KVIIAGGSAYSRVIDFKRFRNIADKVGAYLMVDMAHFSGLVAGKGYPNPCDHAHVVTSTT
HKVFRSARGGIILTNHEDLAKKFNTAVFPGYQGGPLMHVIAGKAAGFLEALKPEFQTYIS
NVLANAKMLAETLKNNGFKIYSGGTDTHLMLVDLRPFNVKGNMAADSLSRANITCNKNGI
PFDSESPMVTSGIRLGSQAATTRGFGLNEFQKVGELITKVIEGLSKNPDDNSKIETEVRD
EVVNLCSSFPIYKHLRK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgaagccaaatatctaaataatgattatcagaattttttcgagaaaagatta
tctgaaagcgatcctgaattatttaaagctattaatgatgaacttattagacaacaaaat
catatagagctaatagcttctgaaaatatagtatctcaggcagtgttagaagcacaagga
tctgttttaacaaataagtatgcagaaggttattcaggaaaaagatattataatggttgt
gaacacgtagatgttgctgaagaattagcaatagaaagattaaagaaattgtttaattgt
aagtttgcaaatgttcaaccacactctggcgcgcaagctaatggcgcagtttttttagct
cttttaaaaccaggcgacacatttatgggaatgagtttaaattctggtggccatattact
catggtttaaaaatatcaatgtctggaaaatggtttaatccaataggatatgatgttgat
aaggaaactggtttgattgattatgacgaagttgaaagattagctttagaaaacaaacca
aaagtaattattgctgggggcagtgcatattctagagtaatagattttaaaagatttaga
aacattgctgataaagttggagcttatctgatggttgacatggctcacttctcaggtttg
gttgcaggtaaaggttatccaaatccctgcgatcatgctcatgtggtaacttcaactact
cataaagtttttagaagtgctagaggtggaataatacttacaaaccatgaagacttagca
aaaaaatttaacacggctgtgttcccaggataccaaggtggaccactaatgcatgttata
gctggtaaggcagctggttttttagaagctctaaaacctgaatttcaaacttatatttca
aatgtattagcgaatgccaaaatgttagcagagactttgaaaaataatggtttcaaaatt
tattctggaggtacagatacacatctgatgttagttgatttaagaccattcaatgttaaa
ggcaatatggctgctgacagtttatctagggcaaacattacttgtaataagaatggaatt
cctttcgactctgaaagtccaatggttacttcaggtattcgtttgggatctcaggctgcg
actactagaggttttggattaaatgagtttcaaaaagttggtgaattaataacaaaggtc
attgaggggttgtcaaaaaatcctgatgataattctaaaatagagactgaagtaagagat
gaagtagttaatctatgttcatcatttcctatatataaacatttgagaaaatga
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