Pseudarthrobacter phenanthrenivorans: Asphe3_38540
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Entry
Asphe3_38540 CDS
T01435
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn00040
Pentose and glucuronate interconversions
apn01100
Metabolic pathways
apn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Asphe3_38540
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Asphe3_38540
Enzymes [BR:
apn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Asphe3_38540
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ADX74942
UniProt:
F0M988
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Position
complement(4110447..4111820)
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AA seq
457 aa
AA seq
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MRNPKPLTSLSVLVAVAASLLASSPTSFASPAPQADPAAQTARVPLERQVLPANDGWAAA
GTGTTGGAAASADRVYDVSTKAELLSAFAFAGSEPKIIRIHGDIAANVDANGSPLSCDDY
ASGTGYSLARYLADFDPVRYGTDTEPEGPQESARRLAAAKQASTIRWDIPSNTTLVGAGP
GSSISGAALRINRAENVIVRNLTVRDAADCFPSWDPTDGDTGNWNSEYDLLQIINGSRNV
WVDHAHFTDAPNLDSAQPSYFGRPYQVHDGAVDVTNGSDLVTMSYNRFSEHDKLLLIGST
DSTSRGDVGKLRVTIHHNVFDNVGQRAPRVRYGQVDVYNNHFRTSDSSGIPYGYTFRAGV
ESHLYAEANAVTLPADIPTAAVISYFKGKAIATIGNAVNGKIVDLREAYNAAAPADRQLA
ADDSWKPELRTHVHAAQAVPALLAGAVGPVFTAGEAR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatccgaagcccttaacgtcgctgtcagtgctggtggccgtggccgcctcgctg
ctggcaagctcacccacctcgtttgcttcccctgccccgcaggccgaccccgcagcgcag
actgcccgcgtgccgctggagcgccaagtgctccccgcgaatgatggctgggccgcagcc
ggaacgggtaccaccggtggagcagcagcaagtgcagaccgggtttacgacgtctcgaca
aaggctgaactgctgtcagcctttgcctttgcagggtcggagccgaagatcatccgcatc
cacggggatatcgcggccaacgtggacgcgaacggttctcccctgagctgcgacgactac
gcaagcggaacggggtattccctggcccggtacctggccgatttcgatcccgtccgatac
ggaacggacacggaaccggaggggccgcaggagagcgcccggcggcttgcagcggcgaag
caggcctccacgatccgctgggacatccccagcaacaccaccctcgtaggagcggggccg
ggcagcagcatctcgggggcggcgctccgaatcaaccgggcagagaacgtcatcgtccgg
aatctgacagtgcgtgatgccgccgactgttttccgtcctgggaccccaccgacggtgac
accggtaactggaacagcgagtatgacctcctgcagatcatcaacgggtccaggaacgtc
tgggtggaccatgcccactttactgacgccccaaacctggacagcgcccagcccagctac
ttcggccggccgtaccaggtccacgatggggccgttgacgtgaccaacggctcggacctg
gtcaccatgtcctacaaccggttctcggaacacgacaagctcctgctcatcgggtccacg
gattccaccagccggggggatgttggcaagctgcgcgtaaccatccaccacaacgtcttt
gacaatgtgggccagcgtgcaccccgggtgcgctacggacaggtggacgtgtacaacaac
cacttcaggacctcggattcatcggggatcccgtacgggtacaccttcagggcaggtgtg
gaatcccacctctatgctgaggcaaatgccgtcaccctcccggcagacattcccaccgca
gcggtgatctcctacttcaaggggaaggccattgccaccatcggtaacgcagtaaatggc
aagatcgtggacctccgtgaggcctacaacgcagccgcgcccgcggaccggcaactggcg
gccgacgacagctggaagccggaactccgaacccacgtccatgcggcccaggctgtgccc
gcactcctggcgggcgccgtcggacccgtcttcacagcaggggaggcccgctga
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