Acetobacter pomorum: CPF11_02005
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Entry
CPF11_02005 CDS
T05180
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
apom
Acetobacter pomorum
Pathway
apom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPF11_02005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apom03400
]
CPF11_02005
DNA repair and recombination proteins [BR:
apom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPF11_02005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
HHH
GIY-YIG
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ATI11338
UniProt:
A0A346DUZ6
LinkDB
All DBs
Position
complement(407066..408979)
Genome browser
AA seq
637 aa
AA seq
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MMTADSSPSDTLPVAQEQAAPAVKGVEAIRHALKTMPLSPGVYRMLGAKGEVLYVGKALA
LKKRVTSYTHINRLPERLRRMVSETVAMEIVTTHTEAEALLLEANYIKRMKPRFNILLRD
DKSYPWLMLTDAHAFPQIAKHRGKAIKGASLWGPFASAWAVNQTLNLIQRVFLLRSCTDA
VFNARTRPCLLYQIKRCSGPCVDRIDQEAYGKLVEQAREFLSGKDTALRETLGQEMNAAA
EALDFERAAVLRDRIRALAQMQESSVINPASLQDADVLALWQEAGHACIQVFFIRGGRNN
GSRSFFPAHTQDASPADVLSAFIAQFYDDKPCPAQILVNYELPESLLLTEALSLRRGRKV
EILAPQRGEKKQVLDHAVSNARDALSRKLAETAGQAKLLQGVADVLGLDAPPERIEVYDN
SHIQGSHAYGVMIVGGPEGFNRKAYRKFKIKGPVTPGDDFGMMREVLERRFGRALKEAEE
GDTSNWPDVLLIDGGAGQYSAVRSVLDDLGVTGVKLVGIAKGPDRDAGKEWFYTEDKEPF
QLDLRDPVLYYLQRLRDEAHRFAITTHRSGRSKTLVKSELDDVPGIGPARKKLLLNTFGS
ARAIKQAGLAELEAAHGISRETARAIYGHFHPDWTPG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagctgattcttccccttcagataccctgcctgtggcgcaggaacaggcagcc
cctgctgtaaagggggtagaggccattcggcatgcacttaaaaccatgccgctttcaccc
ggcgtgtatcgtatgctcggcgctaagggggaagtgttgtacgttggcaaggcgttggcg
cttaaaaagcgggtaacgtcttacacccacattaaccgcttgcccgaacggctacggcgc
atggtttccgaaacggtagcaatggaaattgttaccacccatacggaagccgaagcactg
ttgctggaggccaactacatcaagcgcatgaagccgcgcttcaacattctgctgcgggat
gacaaaagctatccgtggctgatgctgacagatgcgcatgcgtttccgcaaattgccaaa
caccgtggcaaggccattaaaggggccagcctatgggggccgtttgcttcggcttgggcg
gttaatcagacccttaatctgatccagcgcgtttttctgctacgctcctgcactgatgcg
gtttttaacgcacgcacccggccgtgcctgctttatcaaatcaaacgttgctctggcccg
tgtgtggatcgaatagatcaggaagcttacggcaaattggtggagcaggcgcgagagttc
ctttctggcaaggatacggcgctgcgtgaaaccttggggcaggaaatgaatgcggcagca
gaagcgctggattttgagcgtgctgctgtattgcgcgatcgtattcgtgcgttggcgcaa
atgcaggaatccagcgtcatcaaccccgcatctcttcaggatgcagatgtgctggccctg
tggcaggaggccggacacgcctgtattcaggtctttttcattcgcggtgggcgtaataat
ggcagccgctcattctttcccgcccatacgcaggatgcctcacccgcagatgtgctttct
gcctttatcgcgcagttttacgatgacaaaccctgtccagcacagattttggtcaattat
gaactcccggaatctttgctgctgacagaggcactctctcttcggcgggggcgcaaggtg
gaaattcttgcgccgcaaaggggcgagaaaaagcaggtgcttgaccatgccgtgagcaac
gcgcgggatgcactaagccgcaagctggcggaaaccgcagggcaggccaagttgctacaa
ggcgtggcagatgttctggggctggatgcgccgccagaacgcatagaagtgtacgataac
agccatattcagggctcgcacgcctatggtgttatgattgtgggcgggccggagggcttt
aaccgcaaggcgtatcgcaagttcaaaattaaaggccctgtcacgccgggggatgatttt
ggcatgatgcgcgaagtgctggaacgccgctttggccgcgctttgaaagaggcagaagag
ggcgatacctctaactggccagatgttctgctgattgatggtggggcagggcaatattct
gccgtgcgcagcgtgctggatgatctgggcgtaacgggtgtaaaacttgtaggtattgcc
aaagggccggaccgcgatgccgggaaggagtggttctatacggaggataaggaacccttc
cagctcgatctgagagaccccgtactgtactatttgcaacggttgcgcgatgaggcccac
cgttttgccattaccacccataggtctggtagatccaaaacactggtgaagtccgaactg
gatgatgtgcccggtattgggcctgcacgtaaaaagctgttgttaaacacatttggttca
gcgcgcgccatcaagcaggctggtttggcagaactggaagccgctcatggtatcagccgg
gaaacagcgcgtgccatttacggccattttcacccggattggacaccgggataa
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