KEGG   Actinobacillus porcitonsillarum: DDU33_01095
Entry
DDU33_01095       CDS       T05443                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
apor  Actinobacillus porcitonsillarum
Pathway
apor02024  Quorum sensing
apor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DDU33_01095
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DDU33_01095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apor03019]
    DDU33_01095
   03036 Chromosome and associated proteins [BR:apor03036]
    DDU33_01095
Messenger RNA biogenesis [BR:apor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DDU33_01095
Chromosome and associated proteins [BR:apor03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DDU33_01095
SSDB
Motif
Pfam: Hfq LSM Hfq_1 Gag_p24_C
Other DBs
NCBI-ProteinID: AWI50180
UniProt: A0A2U8FGS1
LinkDB
Position
complement(212921..213205)
AA seq 94 aa
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARAISHSNHNGNGHQQAAQQSDVVAEKVAE
NT seq 285 nt   +upstreamnt  +downstreamnt
atggcaaaaggtcaatctttacaagacccatatttaaatgcactccgccgtgagcgtatt
cctgtttcgatctatttagtaaatgggattaaattacaaggtcaaatcgagtcattcgac
caatttgtgattttattaaaaaacacagtgagtcagatggtttataaacatgcaatttca
acggttgtgcctgcacgtgcgatttctcattctaaccataatggtaatggacatcagcaa
gcagctcaacaatcagatgttgttgcagaaaaagtagcggaataa

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