Ancylobacter pratisalsi: G3A50_00670
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Entry
G3A50_00670 CDS
T06476
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
apra
Ancylobacter pratisalsi
Pathway
apra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3A50_00670 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apra03021
]
G3A50_00670 (rpoB)
03400 DNA repair and recombination proteins [BR:
apra03400
]
G3A50_00670 (rpoB)
Enzymes [BR:
apra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3A50_00670 (rpoB)
Transcription machinery [BR:
apra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3A50_00670 (rpoB)
DNA repair and recombination proteins [BR:
apra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3A50_00670 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QIB32382
UniProt:
A0A6P1YGV6
LinkDB
All DBs
Position
complement(123394..127524)
Genome browser
AA seq
1376 aa
AA seq
DB search
MAQTFTGRKRVRKFFGKIQEVAEMPNLIEVQKASYDQFLQILEPKGGRADDGIQAVFKSV
FPISDFSGAAMLEFVRYDFELPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDPDSGSKSV
KDIKEQDVYMGDIPLMTSNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAA
RIIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLLFALGLAGEEILSTFYDTITYTRTK
GGWRMPFDPKRMKGYKAISDLVDADTGEVVIEAGKKVTVRQARLLAESGLKALKIPEEEM
IGHYVAEDMVNPENGEIHVEAGEEVTEKLLKQLEELGYDELPILDIDHVNIGAYIRNTLA
VDKNVTREDALFDIYRVMRPGEPPTVDSAQAMFHSLFFDSERYDLSAVGRVKMNMRLDLD
AEDTVRVLRREDILAVIKTLVELRDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRME
RAIKERMSSVDIDTVMPQDLINAKPVAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIEAPYR
RVKDSQVQDEVVYLSAMEEGKYHVAQANIPLDAEGRFTEDLIVCRHAGDVLLVTPDRVDF
MDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRADAPFVGTGMEAVVARDS
GAAIGARRTGVVDQVDATRIVIRATEENDPSKSGVDIYRLQKFQRSNQSTCINQRPLVRV
GDRVSKGDIIADGPSTDLGDLALGRNILVAFMPWNGYNFEDSILLSENISKGDIFSSIHI
EEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQAGDILCGKITPKGES
PMTPEEKLLRAIFGEKAADVRDTSLRVPPGVTGTIVEVRVFNRHGVDKDERAQAIEREEI
ERLAKDRDDEQAILDRNVFGRLAEILDGKTGIAGPKGFKKDTVLTRTVLTDYPRSQWWQF
AIADDQIMTELEAIRNQYDESKKRLEQRFLDKVEKLQRGDEMPPGVMKMVKVFIAVKRKI
QPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTPVDMVLNPLGVPSRMNVGQILETHLGWA
CAGLGRVIDNAIEKYREANDIAPLKTAFTEIYGPDETIDSLDEEGLVELGSNLRRGVPIA
TPVFDGAREADIERMLELAGLDKSAQSTLFDGRTGEQFDRKVTVGYIYMLKLHHLVDDKI
HARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTK
VYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELMNSKTQAAVPGAGESMPAAE
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacgttcaccggtcgtaagcgggtccgcaagtttttcggcaagatccaggaa
gtcgcagagatgccgaaccttattgaggttcagaaggcatcctacgaccagttcctgcag
atccttgagccgaagggcggtcgcgcggacgacggcattcaggcggttttcaagtcggtt
ttcccgatctcggacttttcgggcgcagccatgctcgaatttgtccgctacgatttcgag
ttgccgaagtatgacgtggatgagtgccgccagcgcggcatgacattcgcagcgccgctg
aaggtgacgcttcgtctcatcgtgttcgatatcgaccccgattccggctccaagtccgtt
aaggacatcaaggagcaggacgtctatatgggcgacatcccgctgatgacctcgaacggt
acgttcatcgtgaacggcaccgagcgcgtgatcgtctcgcagatgcatcgttccccgggc
gtgttcttcgatcacgacaagggcaagacgcactcctcgggcaagcttctcttcgccgcc
cgcatcattccctatcgcggttcctggctcgatatcgagttcgacgccaaggacatcgtg
ttcgcgcgtatcgaccgtcgccgcaagattccggtgacgagccttctgttcgccctcggc
ctcgccggcgaagagattctgagcaccttctacgacaccatcacctacacccgcaccaag
ggcggatggcgcatgccgttcgatcccaagcggatgaagggctacaaggccatcagcgat
ctggtcgacgccgataccggcgaagtcgtgatcgaggccggcaagaaggtgaccgttcgt
caggcccgcctgctggcggaaagtggcctgaaggcgctgaagatcccggaagaagagatg
atcggccattacgtggccgaggacatggtgaaccccgagaacggcgagatccacgtcgaa
gccggcgaggaagtcaccgagaagctgctgaagcagcttgaggagctcggctatgacgag
ctgccgatcctcgacatcgatcatgtcaatatcggcgcctatatccgcaacacgctggcc
gtcgacaagaacgtcacccgcgaggatgcgctgttcgacatctatcgcgtgatgcgtccg
ggcgagccgcccacagtcgattccgcgcaggccatgttccactcgctgtttttcgacagc
gagcgctatgatctgtccgctgtcggccgcgtcaagatgaacatgcgcctcgacctcgac
gccgaggacaccgtgcgcgtgctgcgccgcgaggacattctcgcggtcatcaagacgctg
gtggaactgcgcgacggcaagggcgagatcgacgacatcgaccatctcggcaaccgccgt
gtgcgttctgtcggcgagctgatggaaaatcagtaccgcgtcggcttgctgcgcatggag
cgcgccatcaaggaacgtatgtcgtccgtcgacatcgacaccgtgatgccgcaggacctg
atcaacgcgaagcccgtcgcagcggcggtgcgcgagttcttcggttcctcgcagctctcg
cagttcatggatcagaccaacccgctctcggagatcacccacaagcgtcgcctttcggcg
cttggaccgggcggtctgacgcgcgagcgtgccggcttcgaggtgcgcgacgtgcacccg
acgcattacggccgcatctgcccgatcgagacgccggaaggccccaacatcggcctcatc
aactcgctggcgacctttgcccgcgtcaacaagtacggcttcatcgaggcgccctatcgc
cgcgtgaaggacagccaggttcaggacgaagtggtctatctctccgccatggaggagggg
aagtaccacgtcgcgcaggccaacattccgctcgacgcggaaggccgcttcaccgaagac
ctgatcgtgtgccgccatgccggcgacgtgcttctggtcaccccggaccgcgtcgacttc
atggacgtgtcgcccaagcagctggtgtctgtcgccgcggcgctgattccgttccttgag
aacgacgacgccaaccgcgcgctgatgggatcgaacatgcagcgccaggcggtgccgctg
gttcgcgccgatgcgccgtttgtcggcaccggcatggaagccgtggtcgcccgtgactcg
ggtgccgccatcggcgcccgccgcaccggcgtcgtcgaccaggtggacgcgacccgtatc
gtcatccgcgcgacggaagagaacgatccgtcgaagtcgggcgtcgacatctaccggctg
cagaagttccagcgttccaaccagtcgacctgcatcaaccagcgtccgctggtgcgtgtc
ggcgaccgggtgagcaagggcgacatcatcgcggatggtccctcgaccgacctcggcgat
ctggcgctcggccggaacatcctcgtcgcgttcatgccgtggaatggctacaacttcgag
gactcgattctcctgtccgagaacatttcgaagggcgacatcttctcgtcgatccatatc
gaagagttcgaggtgatggcccgcgacaccaagctgggtcccgaggaaatcacgcgcgac
attccgaacgtgtcggaagaagcgctgaagaacctggatgaggccggcatcgtctatatc
ggtgccgaggttcaggcgggtgacatcctctgcggcaagatcacgccgaagggcgagagc
ccgatgacgccggaggagaagcttctccgcgccatcttcggtgaaaaggctgccgacgtg
cgcgacacctcgctgcgcgtgcccccgggcgtgacgggaaccatcgtcgaagtgcgcgtg
ttcaatcgccacggcgtcgacaaggacgagcgcgcccaggctatcgagcgcgaggagatc
gagcgtctcgccaaggatcgcgacgacgagcaggcgatccttgatcgtaacgtcttcggt
cgtctggccgagattctggacggcaagaccggcattgccgggcccaagggcttcaagaag
gatacggtcctcacccgcacggtgctgaccgactatccgcgcagccagtggtggcagttc
gcgatcgccgacgaccagatcatgactgagctggaagcgatccggaatcagtacgatgag
tcgaagaagcgccttgagcagcgcttcctcgacaaggtcgagaagctgcagcgcggcgat
gaaatgccgcccggcgtgatgaagatggtcaaggtcttcatcgccgtgaagcgcaagatc
cagccgggcgacaagatggccggccggcacggcaacaagggcgtggtttcgcgcattgtt
ccggtcgaggacatgccgttccttgaggacggcaccccggtcgacatggtgctcaacccg
ctcggcgtgccctcgcgcatgaatgtcgggcagatcctggagacccatctgggctgggcc
tgcgcgggtcttggccgggtgatcgacaacgcgatcgagaaatatcgcgaggcgaacgac
attgctccgctgaagacggcgttcacggagatctacggcccggacgagaccatcgactcc
ctcgacgaagagggactcgtggagctcggttcgaacctgcgtcgcggcgtgccgattgcc
accccggtgttcgacggtgcccgcgaagcggacatcgagcgcatgctggagctggcaggt
ctcgacaagtcggcccagtcgacgctgttcgatggacggaccggcgagcagttcgatcgt
aaggtgacggtcggctacatctacatgctgaagctgcatcatctcgtcgacgacaagatc
catgcacgctcgatcggcccgtactcgctcgtcacccagcagccgctgggcggaaaggcg
cagttcggcggacagcgtttcggcgaaatggaggtgtgggcgctcgaagcctacggcgcc
gcctacacgctgcaggaaatgctgaccgtgaagtcggacgacgtggctggccgcaccaag
gtctacgaggccatcgtgcgcggcgacgacaccttcgaggcgggcattcccgagagcttc
aacgtgctcgtcaaggaaatgcgctccctgggtctgaatgtggagttgatgaactccaag
acccaggccgcggtgcccggcgccggcgaaagcatgccggctgcggaatga
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integrated database retrieval system
