Abrus precatorius (Indian licorice): 113851504
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Entry
113851504 CDS
T07330
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113851504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113851504
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113851504
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113851504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
113851504
NCBI-ProteinID:
XP_027337807
UniProt:
A0A8B8K202
LinkDB
All DBs
Position
Unknown
AA seq
2414 aa
AA seq
DB search
MSFDSLPSMDNFSSKASNQIRFLLSSFNEVNFDSVFHQLSQFAEFGTAGCILLLQTCLDH
YSYVRRDTKDMQHEPILEAVIKYLLDKPNFITVFLETMKNVEINESFLESFCNGLQLSLL
EKIVISLALSDSENPDARLCGKNFCMARIEELCANPGSLSFHEQIHNIIMFLKQSEGLSK
HVDSFMQILSLVQFKDTPPFVLTPLLPDEMREADFLRNMELFHECGENDFDAILADIQKE
MDMGDIVKELGYGCTIDVAQCKEIFSLFLPLTDSMLSKLLGAIAGTHAGLEDNQNTFLTF
GTALGCNNLSELPPLNSWNIDVLIDTVKHLAPQTNWIRVIENLDHEGFFLPSEEAFSFLM
SVYKLACKDPFPLHAVCGSVWKNTEGQLSFLKYAVSAPPEIFTFTHSARQLAYVDAINGH
KLQNGHANHAWLCLDLLDVLCQLAEKGYASIVRSILDYPLKHCPEVLLLGMAQVNTAYNL
LQREVSLIVFPMVVKSAVGSGMILHLWHLNPNMVLRGFMDSQNNDADSTIRIVDICQELK
ILSSVVEIVPSYYSVRLAAVASRKEFLDLDKWLSSNLTTYKDVFFEECLKFLKDVQFGGS
QNLSGKSFHQSGAVQNIYAETSATFLKVLKSHTDLVIARQLSEELEKLHISIVDSNPRLQ
NGGTADSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFECM
IANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMF
LFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHADVDGASH
PAVISNHNSAQATLGHVEVKQLSGSSVLQPGQQHLSLQLQQRRENPLDDRHKATVSSSTD
VKPLLSSLGQSSVVTPADTSSSSKLHSTVSASSMLSSPGFVRPSRGANSTRFGSALNIET
LVAAAEKRETPIEAPGSEVQDKISFIINNISAANIEAKAKEFTEILKEQYYPWFAQYMVM
KRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLG
SWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPW
TMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDRKREIEGNPDFSN
KDVGASQSQMISDIKSGLVPPVNQVELPLEVTNPSNTAAHPHILSQYAGPLHISTGTLME
DEKVTPLGLSDQLPSAQGLLQATPSPAPFTISQLPTQIPNIGTHVIINQKLSGFGLQMHF
QRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLA
GSLAHVTCKEPLRASISSQLRTSLQNLNIASEILEQAVQLVTNDNLDLGCAVIEQAATDK
AINTIDTEIGQQLSLRRKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVY
EDFVRLPWQNQSSQSSHSMSAGVAVQSGNTSLTGANGPVSGQINPGYPVSTAYEGVSRPL
DDITESNLAPHFSASSIHIRAADSVSQHSLEKDSLASFPSASSTPELHAVDSSDVVKESG
ASSQPLVTSGAMERLGSSFLEPSLTTRDALDKFQIVAQKLEAMVSNDSREAEIQGVISEV
PEIILRCVSRDEAALAVAQKVFKGLYDNASNNIHVCAHLAILTAIRDVCKLAVKELTSWV
IYSEEERKYNKDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEP
KVISELHNLVDALAKLATKPGCPESLPQLLEMIKNPTGNAAALSSGNAGKEDKARQSRDN
KGPGLLAANREELNGLDSVEPDPAGFREQVSMLFAEWYRICELPGANDSASSHFILQLHQ
NGLLKGDDVTDRFFRLLMELAVTHCLSSEVISSGALTSPQQMPTMSFLAIDIYAKLIFSI
LKGSNKLLLLSKILGVTVRLIIKDAEEKKASFNGRPFFRLFINWLLDLSSLEPVTDGSNL
QILTAFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQF
MEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILS
AFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDDYLKTRQQSSSF
LSELKEKLLLSPNEAASAGTRYNVPLINSLVLYVGMQAIQQLQGRTPHAQSAANAFPLAV
FSVGAALDIFQTLIVDLDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQ
EQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCG
GPKPVDDSMVSGWV
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgattccttgcccagcatggacaacttttcctccaaagcttcaaaccagatt
cggtttctgctcagctccttcaacgaagtcaactttgactccgttttccatcaactttct
cagttcgctgaatttggaaccgctggatgcattttgctgcttcagacttgcttggatcac
tatagttatgtcagaagagatacaaaagacatgcagcatgagccaattcttgaggcagtc
attaagtacctcttggacaaaccaaacttcattacagtgtttttggagacaatgaagaat
gtagaaattaatgaaagctttttagaaagtttttgtaatggattgcagttgtcattattg
gaaaaaattgtgatcagtcttgctttatctgattctgaaaatcctgatgctaggctatgt
gggaagaatttttgcatggctcggattgaggaattgtgtgccaatcctggttctttgagt
ttccatgagcaaattcacaatattatcatgtttctaaagcagtctgagggtctatcgaag
catgtggattcctttatgcagatattatcacttgtgcagtttaaggacacaccacctttt
gttttgactccattgctacctgatgagatgcgcgaggctgattttttaaggaatatggag
ttgttccatgagtgtggtgaaaatgatttcgatgctattttagctgacatacagaaggaa
atggacatgggagatattgtgaaggaactaggctatgggtgcactattgatgtcgcacag
tgcaaggaaatattttcactctttttacctttaactgatagtatgctctctaaattactt
ggtgctattgctggtacccatgctgggctggaggacaaccagaatacattcttaactttt
ggcacagcccttggatgcaacaacttgtctgagttgccaccactgaactcttggaatatt
gatgtcttgatagatacagtcaagcatcttgcgcctcaaaccaattggatacgggttatt
gaaaatcttgatcatgaaggatttttccttcctagtgaagaagctttctcttttctcatg
tctgtatataaacttgcctgtaaggatccattccctctccatgctgtctgtgggtctgtc
tggaagaatactgagggtcagctgtctttccttaaatacgctgtgtcagcaccaccggaa
atttttacctttacacactctgctaggcagctggcatatgttgatgcaatcaatggccac
aagcttcaaaatggacatgcaaatcatgcatggctgtgtcttgaccttttggatgtcctc
tgccagctagctgaaaagggttatgccagtattgttcgatcaatccttgattatcccctt
aaacactgtcctgaagtcttgcttcttgggatggcacaagttaatactgcctacaacctc
ttgcagcgtgaagtatctctaattgtttttcccatggtagtaaaaagtgccgttggcagt
gggatgattttacacctctggcatttgaatcccaatatggtcttgcgagggtttatggat
tctcaaaataatgatgcagacagcactataagaattgtggacatctgccaggagctaaag
attctgtcatcagtggtggaaattgttccctcttactatagtgtaaggttagcagctgtt
gcatcaagaaaagaatttcttgaccttgataagtggttgagtagcaacttaactacttac
aaggatgtcttttttgaggaatgcctcaagttcttaaaggatgtccagtttggtggatca
caaaacctttctggcaaatcttttcatcagtctggtgctgttcagaatatctatgctgag
acatctgctactttcttgaaggttcttaaatctcatactgacttggtaatcgcaaggcaa
ctttctgaggagttggagaagttgcatatatctattgtagattcaaatccaaggcttcag
aatggtgggactgctgattcatctacttctgatggatatgccgatgacattgaagcagaa
gcaaactcctacttccatcagatgttctctgatcagttaaccattaacgcaatggtgcaa
atgcttgcccgattcaaggaatcttctgtgaagagggagaagtcaatttttgaatgcatg
attgcaaacttatttgaggaatataggtttttcccaaagtatcctgaaaggcaactcaaa
attgctgcagttctctttggttctgtgatcaagcatcagcttgtaactcatctttctctt
gggattgctcttcgatatgttcttgatgcactgcgcaagcctgcagattcaaaaatgttt
ttgtttggaagtctggcattggagcagtttgtggatcgtctgattgagtggcctcagtat
tgcaatcacattctacaaatttcccatttgcgcagtacacattcagaaatagttgctttc
attgaacaagctcttgccaggatttcctctggtcatgcagatgtagatggggcaagccat
cctgctgttattagtaaccataattctgctcaggctacattagggcatgtagaggtaaaa
cagctcagtggctctagcgtcctacaacctggacaacaacatttatcgctgcagcttcaa
cagagacgtgaaaatcccttggatgatcgtcacaaagccactgttagttcatctactgat
gtaaaaccactcttatcttccctagggcaatcttcagtagtaacacctgctgatacttct
agttctagtaagttacatagcacagttagtgcctcatcaatgctatcttcccctggtttt
gttcgtccatcccgtggagctaattctaccaggtttggatctgccttgaacattgaaact
ttggttgctgctgctgagaaaagagaaactcctattgaggctccagggtcagaggttcag
gacaagatatcatttataattaataatatttctgctgctaatattgaggctaaagcaaaa
gaattcactgaaattttgaaagagcagtactatccatggtttgcacagtatatggttatg
aaaagagcgagcattgagccaaatttccatgacttgtatctgaaattcctggataaagtt
aattcaaaggctttgaacaaagagattgtccaggcaacttatgaaaattgcaaggttctt
ttgggatcagaactcataaaatctagttcagaggagcggtctttgctaaaaaatctgggg
agctggcttggaaagttgacaattggccggaaccaggttttgagggctcgtgaaatagac
ccaaaatctttgattatagaggcatatgagaaggggctgatgattgcagttattccattt
acttcaaagatcctcgaaccatgccaaagcagtcttgcatatcaacctcctaatccttgg
actatgggcattttgggattgcttgctgagatttattcaatgccaaacttgaaaatgaac
ctcaagtttgacatagaggttttattcaaaaaccttggtgtagatatgaaggatgtcaca
cctacttctctccttaaggatcgtaaaagagaaattgaaggaaatcctgatttctccaat
aaagatgttggggcatctcaatcacaaatgatttctgatataaaatctggccttgtacct
ccagtaaatcaagtcgaattaccgcttgaagtcaccaatccatccaatactgcggctcat
ccacatatactgtctcagtatgctggtcctcttcatatttcaacggggacattgatggaa
gatgagaaggttacacctttgggattgtctgatcagcttccctctgctcaaggactgtta
caagcaactccttccccagcaccgtttactattagccagctcccaacacagatacctaac
attggaactcatgttattatcaatcaaaaactcagtggttttggtttgcaaatgcatttt
cagagagcagtacccattgcaatggacagagctatcaaagagatagtgtctagtattgtg
cagcgtagtgtttccatagcaacacaaactacaaaggagcttgttttaaaggattatgca
atggaatctgacgagacacgaatattaaatgctgcacacttgatggttgccagcctggct
gggagtttggctcatgttacatgcaaagaaccattacgggcctcaatatctagtcaactg
aggacttcacttcagaacttaaatattgctagtgaaattttggaacaagctgtgcaactt
gtcaccaatgataatctagatctagggtgtgcagtgattgaacaggctgctactgataag
gcaataaacaccattgataccgaaattggtcagcaactttctttgagaaggaaacatcga
gaaggtatgggttctacattttttgatgcaaacttgtatccacaaggttctatgggtggt
gtaccagagccccttcgccccaaacctggtcagttgtccctctcacaacagcgtgtctat
gaggactttgttcgacttccctggcaaaaccagtctagccaaagctcacattctatgtct
gctggtgttgctgttcaatctggaaatactagtcttactggcgccaatggtcctgtatca
gggcagataaaccctggttaccctgtgagcacagcatatgaaggggtctcacgaccgtta
gatgatataacagaatcaaatttggctccacattttagtgcttcctcaattcacattaga
gctgctgatagtgtttcccagcatagtttggagaaggactctcttgcctcatttccttca
gcttcttccaccccagagttgcatgcagtagattcttcagatgttgtgaaagaatctgga
gcttcttcacagccactagttacatcaggtgctatggagcgccttggaagtagtttcttg
gagccttctctcactacaagagatgccctagataaatttcaaattgttgcacaaaagttg
gaagctatggtcagcaatgattccagggaagcagaaatacagggtgtcatttctgaggtt
cctgagatcatacttagatgtgttagtcgagatgaggcagctttagctgtggctcaaaag
gtttttaagggtttatatgataatgcatcaaacaacattcatgtatgtgctcatcttgca
atcctgactgccattcgtgatgtttgcaagcttgctgtcaaggagcttactagttgggta
atttactcggaagaagaaaggaaatataacaaagatattactgttggcctcatccgtagc
gaattgctaaatcttactgagtacaatgttcatatggcaaaactaattgatggaggaagg
aacaaggctgcaacggagttttctatttcccttcttcaaaccctggttattgaggaacct
aaagttatttcagaacttcacaatcttgttgatgctttggcaaagcttgctacaaagcct
ggatgccctgagtcattaccacagcttcttgaaatgatcaagaatcctactggtaatgct
gctgctctatcctctggtaatgctggaaaggaggataaggctagacaatcaagagacaat
aagggtcctggtcttctagctgcaaacagggaagagttaaatggtttagattctgttgaa
ccagatcctgctgggttccgggagcaggtttccatgttgtttgctgaatggtataggata
tgtgaacttcctggtgccaatgattcagcttcttcccacttcatcttgcaattgcatcag
aatggacttctcaagggggatgatgttacagatcgttttttccggctattgatggaacta
gctgttacacattgcttatcctctgaggtgattagttcgggggcattgacatctcctcaa
cagatgccgacaatgtcatttcttgcaattgatatttatgcaaagcttatcttctcaatc
ttgaagggatcaaacaaactcttgcttctttctaagattctgggagttactgtcagactc
attataaaggatgcagaggagaagaaggcctcttttaatggaagaccatttttcagattg
tttatcaactggcttctagatcttagttcgttggagcctgttactgatggttcaaatctc
cagattttgactgcttttgccaatgcatttcatgctttgcagcccctcaaagttcctgca
ttcagttttgcatggcttgagttgattagtcaccggagcttcatgccaaaaatgttgact
ggcaatggtcaaaaaggttggccttatatccaaaggttgcttgtagatcttttccaattt
atggaaccttttctaaggcatgctgaacttggagaccccgttcgcgttctctacaaaggc
acgcttagggtgctcttggtgctacttcacgactttccagagtttctatgtgactatcac
tttaccttttgcgatgttattcctccaagttgcatacaaatgcgaaatataattcttagt
gcatttccgcgtagtatgaggctgccagatccatctactccaaatttgaagattgatttg
cttcaagaaataacccaatcacctcgcattctttctgaggttgatgcagcacttaaagca
aagcagatgaaggctgatgtagatgactacctcaagacaaggcaacagagttcttcattt
ttgtctgaactgaaggagaagctgcttctctcacctaatgaagctgcctctgctgggact
cgttacaatgtgccactaatcaactcactggtgttatatgttggaatgcaggcaatccag
cagctccaaggtcgaacacctcatgcacaatcagcagcaaatgctttcccattggccgta
ttttctgtcggtgctgcattggatatattccagacactaattgtggacttggacactgaa
gggcggtaccttttcctcaatgccgttgccaaccaacttcgttatcccaatactcataca
cactacttctccttcatccttctgtacttgtttgcagaatcaaaccaggaaattatccaa
gaacaaattactagagtcttgttagaacgcctaattgtgaatcgtcctcatccctggggc
ctcctcattacttttattgagctcatcaagaatccaaggtacaatttctggaaccggtcg
ttcataagatgtgcgccagagatcgaaaaactctttgaatcagtgtctagatcttgtgga
ggtccaaaacctgtggatgacagtatggtttcgggttgggtctga
DBGET
integrated database retrieval system
