Abrus precatorius (Indian licorice): 113857919
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Entry
113857919 CDS
T07330
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03022
Basal transcription factors
aprc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113857919
09124 Replication and repair
03420 Nucleotide excision repair
113857919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113857919
03400 DNA repair and recombination proteins [BR:
aprc03400
]
113857919
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113857919
DNA repair and recombination proteins [BR:
aprc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113857919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
MetRS-N
Motif
Other DBs
NCBI-GeneID:
113857919
NCBI-ProteinID:
XP_027346018
UniProt:
A0A8B8KRR8
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MPEVRIIAKNFMDMVASMPAMKLDKLYENGFICEAILRSLPPLAKKYVLQMLHIDVQVAA
KLLEEWVLPDGASKHRVAVDRLVQLRVFLEAVDRKNEKTYKLNTTFQRSLQKLLVQGGTL
PRESMPSNITVRLPTLEDLEAYALQQWECFLLQLISPSHVEKPLNISSSLMKVFQRRLLS
QRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAAELISFMLELSFHVIGE
AYNINTLTDFQRNIVKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
VETNFRVYAYSTSKLHCEILRLFSSLGTCDVSRVEYQLPNLIVGAITKESLYNAFENGIT
AEQIISFLQQNAHPRVAERIPSVPENVTDQIRLWEGDLNRVEMTEAYYYDEFPSRDVFEG
ACDCAREWNGLLWEDSKKMHMVVKTEVHTYVRDFLRRQK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggttaggatcattgcgaagaatttcatggacatggtggcttccatgcccgcc
atgaagctcgataagctctatgaaaatggattcatctgtgaagctattctcaggtctctt
ccgcctcttgccaagaaatatgtcttacagatgctgcatattgatgtgcaagtggcagct
aaattattggaggagtgggtgcttcccgatggagcttcaaagcacagagtagccgttgat
aggttggttcaattgagagtttttcttgaagctgttgacaggaagaatgaaaagacttac
aaacttaacacaacatttcagagaagtctccagaaacttttagtacaagggggaactttg
cctagggaatcaatgccttctaatattactgtgaggctcccaacattagaagatcttgag
gcctatgctctacaacaatgggagtgtttcttgttgcaactcataagcccaagtcatgtt
gaaaagcccttaaatattagctcttcattgatgaaagttttccagcggcgtctccttagc
caaagagacaaagaagctccaaaattaactgaaagtggtttccagtttttgctgatggat
acaaatgcacagctttggtacatcatcagagaatatatctcaaattctgaggagagaggt
gttgatgcagctgagttgatctcattcatgctggagcttagttttcatgttatcggggag
gcctacaatataaacacattgactgattttcagaggaacatagttaaggatctagcagac
cttggactggtcaaacttcagcagggcaggaaagaaagttggttcatacctacaaaactg
gcaaccaatctttccatgagcttggctgattcatcatctagaaagcagggattcgtggtt
gtagaaacaaattttagagtttatgcttactcaacttcaaaattacattgtgagatattg
cggctattctccagtctcggtacttgtgatgtatccagggtagagtaccaacttccaaat
cttattgttggggctatcacaaaagaaagcttgtataatgcttttgaaaatggcattaca
gcagagcagataatcagtttccttcagcagaatgcgcatcctcgtgttgcagagaggata
ccatcagtgcctgaaaatgtcacagatcagattaggctgtgggaaggagatctaaacaga
gttgagatgacagaagcatattattatgacgagttcccttcccgagatgtatttgaaggt
gcatgtgactgtgccagagaatggaatggcttgttatgggaagattcaaagaagatgcat
atggtggtcaaaactgaggtacatacctatgtgcgagattttttacgccgccaaaagtag
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integrated database retrieval system
