Abrus precatorius (Indian licorice): 113869766
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Entry
113869766 CDS
T07330
Name
(RefSeq) tetratricopeptide repeat protein SKI3 isoform X1
KO
K12600
superkiller protein 3
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113869766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113869766
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
113869766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_14
TPR_8
TPR_19
TPR_16
TPR_17
TPR_12
TPR_9
ARM_TT21_C
TPR_7
BTAD
TPR_10
TPR_NPHP3
Arm_vescicular
Sel1
Motif
Other DBs
NCBI-GeneID:
113869766
NCBI-ProteinID:
XP_027362031
UniProt:
A0A8B8M061
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MESETQREVEEGAEHLFRRLQHSPDDASIHFDIGLFLWEKGEEAKEKAAEHFILSAKLNP
KNGESFKYLGHYYGRVSLDTQRAIKCYQRAVALNPDDFESGDSLCNLLDQAGKESLEVVV
CREASEMSPRAFWAFRRLGFLQVHQKKWSEAVQSLQHAIRGYPTCADLWEALGLAYQRLG
RFTAAVKSYGRAIELDNTVVFALVESGNISLALGSFKKGVEQFRQALEISPHCVPAQYGL
ALGLLGLAKDCINLGAYQWGASLLEEASEVARSSAYSFRNISCIWKLHADIQLTYARCYP
WIEDLQELESNKEAFSASIISWRRTCFLAAIRARFSYQRALYLSPWQANIYADIAVTSDL
IASLDQNYKQDLKSWQLAEKMSMGALLLEGDNYEFWLALGCLSDHNALNQHALIRGLQLN
VSLAVAWGYLGKLYRKEGEKQLAKQMFDRARSIDPGLALPWASMSVESCVREPIPDEAFE
SCSRAVQIMPLAEFQLGLAKLALLSGHLSSSQVFGAIQQAAQHSPQYPETHNLHGLVCEA
RKDYKSAATFYRLARHAINISSCSIQNSYIRDISINLARSLSKAGNAADALQECESLKKE
ASGALDEEGLQVYAFTLWQLGESDLALSVVRSLIGTLSSLETTSVATSICFICRLLHYIC
GLDEVITSIVKMPKELFQSSKASFVVSAINALDGQNRLGFVVSSSQYFLKYHEEMAGMHL
LIALSKLVKNESRNCLDIQSGVAHLRKAMHMFPNCNLIRNFLGYLLLSSKEFNNCHVATS
CCKLDHLDLSDQEGLKSAFDIYGAGAVACYTNGNINPKFTFPTCIKRCSNHTGAVRYLQK
CFHQKPWNHDARYLLVLNYHQRACEQRFPPHLCGILNRLTHVALSNELYSKTEMFYQYRH
FQLLLCASEISLQRGNHMTCITHAKKASELVLPDDYLFFAHLLLCRVYAMKGDCLSFQKE
YLRCLELWTDYPIGWICLKLMECQHELQIDSNAIDLNFRECVKRSGNSWNMWMAVYNLVR
GMISLQKRDLVLAEEFMAQACSLAGFESCFFLCHATICMELVRQYNGFQFVSRAIESLTK
VHELSLIPLPFASLLVAQAEGSLGSKERWNKNLHLEWYNWPSEMRPAELYFQMHLLARQL
KVGPSTTSNIVSSQSPLRWVIRAIHVNPSCMRYWRVLQKLME
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaaacacagagagaggtagaagaaggtgcagaacatctcttccgacgcttg
cagcattccccagatgacgcctcgattcattttgatattggtttgtttttgtgggaaaaa
ggagaagaagcaaaggaaaaggctgctgaacattttattctgtcggccaaattaaaccct
aaaaatggagaatctttcaaatatttgggccattattatgggcgcgtttctcttgatact
cagagagccattaagtgttaccaacgagcagttgctcttaatcctgatgatttcgagtct
ggggattctctttgcaatttacttgaccaagcgggaaaggagagtttggaggttgtggta
tgccgggaagcttctgaaatgtcaccgagggctttctgggctttccgaagattgggtttc
ctgcaggttcatcaaaagaaatggtctgaagctgttcagagtcttcaacatgccatacga
ggctatcctacatgtgctgatttgtgggaagctttgggccttgcttatcagcgactgggc
aggtttactgcagctgtaaagtcttatggccgtgcaattgagttggataatacagtggtc
tttgctttggttgaaagtggaaatatctctttggctcttggttcatttaaaaagggagtt
gaacaatttcgacaagctttggagatttcaccacattgtgtgcctgcacaatatggactt
gcgttggggctgcttggtttggcaaaagattgcattaacctaggagcatatcaatggggg
gcttcactgttagaggaagcatctgaggttgcaaggtcaagtgcttattcttttaggaat
atctcatgtatttggaaactgcatgctgatattcagcttacatatgcaagatgctatcct
tggattgaggatctccaagaattggaatctaataaggaagctttcagtgcttctatcatt
tcttggaggaggacctgttttttggctgctatacgtgcaaggttttcatatcaacgagct
ttgtacctgtctccatggcaagcaaacatctatgctgacattgctgtcacatcagatctt
attgcctcattggaccaaaattacaagcaagacttaaaatcatggcaactggcagagaag
atgtctatgggagccttgctacttgagggtgacaattatgagttctggctggcattggga
tgtctgtctgatcataatgcactaaatcaacatgctttgatcagaggattacaattgaat
gtatctctggctgttgcttggggatatcttgggaagctgtatcggaaagagggtgaaaag
caattggcaaagcaaatgtttgatcgagctagaagtattgatcctggccttgcactgcca
tgggcaagcatgtctgtcgagtcttgtgtgagggaacctattccagatgaggcatttgag
agctgctcacgagctgtgcagataatgcctttagctgaattccaacttgggcttgccaag
cttgctttgttgagtggacatctctcatcttcgcaggtttttggagctattcagcaagct
gcgcagcattctcctcaatatcctgaaacccataatttacatgggctggtttgtgaggct
cgaaaagattataagtctgctgctactttttataggttagcacgtcatgcaattaacatt
agctcatgcagtattcaaaactcatacatcagggatatctcaatcaatttggccagatca
ctttctaaggcaggtaatgctgctgacgctttgcaagaatgtgaaagtttgaagaaagaa
gcctcaggtgctcttgatgaagaaggcttacaagtatatgctttcacattgtggcaactt
ggtgaaagtgatttggctctctctgtagttagaagtctcattggaactctatcttctctg
gaaacgacatctgtggcaacatccatttgtttcatttgtagattgctacactacatatgt
ggacttgatgaagtcatcactagcattgtgaaaatgccaaaggagttatttcaaagttca
aaagctagttttgttgtgtcagctatcaatgcacttgatggacaaaatcgtcttggattt
gttgtctccagtagccaatattttctcaaatatcatgaagaaatggctgggatgcactta
ttaatagcccttagtaaactggtgaaaaatgagtctaggaactgccttgacattcagagt
ggagttgcccacctcagaaaagctatgcacatgttccctaactgtaatttgataaggaac
tttcttggctacctcttgctatccagtaaagagtttaacaattgtcatgttgcaacaagt
tgttgtaaactggaccatcttgatctttctgatcaagaaggtttaaaatcagcttttgat
atctatggtgctggagcagttgcttgctataccaatggcaacatcaatccaaagtttact
tttccaacttgtataaagcgatgttctaatcatactggagctgtcagatacctgcagaaa
tgctttcatcaaaaaccatggaatcatgatgcccgctacttgcttgttcttaactatcat
cagagggcatgtgaacaaagatttcctcctcatctttgtggtatactaaatcgtctaact
catgttgctctttcaaatgaattgtacagcaagacagaaatgttttatcaatatagacac
ttccaacttctactttgtgcttctgagatcagtttacaacgtgggaatcatatgacctgt
ataacccatgccaaaaaggcttctgagcttgttcttcctgatgattatttattctttgca
catctattattgtgccgtgtctatgccatgaaaggtgattgtctaagttttcagaaagag
tatctaaggtgtttagagctttggacagattatcccattggttggatctgtctcaaactt
atggaatgtcaacatgaactgcaaattgattcaaatgccatagatttaaacttcagagaa
tgtgttaaaaggagtggaaattcgtggaatatgtggatggctgtatataacctggtgaga
ggtatgatttccttgcagaagagggatttagtcttagctgaagagttcatggcacaggct
tgttcattggctggttttgaaagctgcttctttctatgtcatgccaccatctgtatggag
cttgtcaggcagtacaatggttttcagttcgtatcacgagccattgagagtctcaccaaa
gttcatgaactttcactgattcccttaccctttgcctcattattggtagcacaagcagaa
ggaagccttggttctaaggagaggtggaacaaaaaccttcacctcgaatggtataattgg
ccatcagaaatgaggccggcagagctctactttcaaatgcatttgcttgcaagacagttg
aaagtcggcccaagcactacatctaacatagtgtccagtcagagtcctctgagatgggtt
attcgggcaatccacgtgaacccttcttgcatgcgatattggagggttttacagaagctt
atggaatag
DBGET
integrated database retrieval system
