Ahaetulla prasina (Asian vine snake): 131198560
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Entry
131198560 CDS
T09329
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131198560 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apri03021
]
131198560 (SMARCD2)
03036 Chromosome and associated proteins [BR:
apri03036
]
131198560 (SMARCD2)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131198560 (SMARCD2)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131198560 (SMARCD2)
PBAF complex
131198560 (SMARCD2)
GBAF(ncBAF) complex
131198560 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
131198560
NCBI-ProteinID:
XP_058039329
LinkDB
All DBs
Position
4:complement(41579437..41625923)
Genome browser
AA seq
509 aa
AA seq
DB search
MAGRGGFPLTPPPPEGPSASVSVATGVPSPAVPAPGSGLLRGPSPAGAATYRPMGHGPQF
QRPGMLPGGRMPMAGLQVGSPSGSPYGTASSMRPGMPPSLMDPFRKRLLVPQAQPSPALT
QRRGLKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQ
KRKLRIYISNTFTPGKEESEGGERIASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDK
ELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLG
VHTQTRASIMQALWLYIKYNKLQDCHEKEYINCNRYFRQIFNCSRMRFSEIPMKLAGLLQ
HPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDIKIHE
TIESINQLKTQRDFMLSFSNNPQDFIQEWIRSQQRDLKIITDVAGNPEEERRADFYQQPW
MQEAVGRHIFAKVQQRRQELEQVLGVRLT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccggacgcggcggctttcccctgactccgccgcccccggagggaccatcggcgtct
gtctcggtggcaacgggcgtcccttcgcctgctgtcccagcaccgggaagcgggcttttg
cgaggacccagtcctgctggggctgctacctatcggcccatgggccacggacctcagttc
caacgccctggaatgctgcctggtggaaggatgcctatggcaggattacaagtggggtct
ccttcaggctctccatacggtacagcctcttcaatgagacctggaatgccaccatccctg
atggatcctttccgaaagcgtctacttgttcctcaggcacaaccatctccagcacttaca
caaaggcgaggattgaaaaggcggaagatggctgacaaaatcctaccacagaggattcgt
gaattagttccggagtctcaggcctacatggacttactagcctttgaacgcaagctagac
cagacaattgcccgcaaaagaatggaaatccaagaagctatcaagaaacctttgacgcaa
aagcggaagctgcgtatttacatctctaacacttttactcctggcaaagaggagtctgag
ggtggtgagcgtatagcctcttgggaacttcgtgtggaaggcaaacttcttgatgatcca
agtaaacagaagagaaaattctcatcctttttcaagagcttggttattgaactagacaaa
gaattatatggaccagacaatcacctggtggagtggcaccggatgccaacaacccaagag
acagatggctttcaggtcaagcgccctggtgatgtaaatgtaaaatgcactctgcttctc
atgctggatcatcagcctcctcaatacaagctagatccgcgtctggctcgcctgcttggt
gtccatacccagacacgtgctagcataatgcaggccctgtggctctatatcaaatataac
aaactccaagactgtcatgagaaagaatatatcaattgcaaccgctactttcgccagatc
tttaactgcagccgtatgagattttcagagattccaatgaaattggcaggactcttacaa
catccagatcccattgttatcaatcacgttatcagtgtggaccctaacgatcaaaagaaa
acagcctgttatgacattgatgtggaagtagatgaccctttgaaagcccaaatgagcaac
ttcttggcctccacaactaatcaacaagaaattgcttccctggatatcaagattcatgaa
acaatcgaatctattaatcagttgaagacacaacgagattttatgctgagttttagtaat
aatcctcaggattttattcaggagtggatcagatctcagcagagagatttgaagatcatc
acagatgtggctgggaacccagaagaagagagacgggctgatttctatcagcagccatgg
atgcaagaagctgttggacgacacatttttgcaaaggttcagcagcgcagacaagaactg
gaacaagtgcttggtgttcgccttacttag
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