Ahaetulla prasina (Asian vine snake): 131202476
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Entry
131202476 CDS
T09329
Symbol
SCN2A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apri04040
]
131202476 (SCN2A)
Ion channels [BR:
apri04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131202476 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
HB_ELP1
FraC
ATP-synt_B
Neur_chan_memb
Lustrin_cystein
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
131202476
NCBI-ProteinID:
XP_058047491
LinkDB
All DBs
Position
1:complement(220872963..220937780)
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AA seq
2073 aa
AA seq
DB search
MAQSVLVPPGPDSFHFFTKESLAAIEQRIAEEKAKKSKQERKDVDDDENGPKPNSDLEAG
KSLPFIYGDIPPGMVSEPLEDLDPYYLNKKTFIVLNRGKAIFRFSATSAVYLLTPFNPLR
KIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGF
CLEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGKKXSGL
TKCQDPGISSCFLCAVIVFVCELPYYRYVTEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLIWPPDNSTFEINITSY
FNSTMGENGTFVNTTVTTFNWEDYVSDDSHFYFLEGQNDALLCGNGSDAGQCPEGYMCVK
AGRNPNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFY
LINLILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAALAAAAGESREF
SEVGGVGGFSESSSATSKLSSKSAKERKNRRKKRKQREQSEGDEKDEDEFHKSESEDSIR
RKGFRFSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSKTSLFSFRGRAKDLGSENDF
ADDEHSTFEDNESRRDSLFVPHRHSERRNSTISQASRSSRVMPILPANGKMHSTVDCNGV
VSLVGGPPSLMSPTGQLLPEGTTTETELRKRRSSSYHMSMDFLSDPTARQRAMSIASILT
NTMEELEESRQKCPPCWYKFANMCLIWDCWTPWLKIKHIVNLIVMDPFVDLAITICIVLN
TLFMAMEHYPMTQQFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGIIVS
LSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKNYKECVCKISNDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCME
VAGQPMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVSRIQK
GIDFIKRKAHEFVQKAFVRKQKALDEIKPLEDLNNKKDSCISNHVIVDIGKDFNYLKDGN
GTTSGIGSSVEKYIIDESDYMSFINNPSVTVTVPIAVGESDFENLNTEEFSSESDLEESK
EKLNATSSSEGSTVDVGLPQVGEQPEAEPEESLEPEACFTEGCIRKFKCCQVSVEDGKGK
LWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYI
FILEMLLKWVAYGFQVYFTNAWCWLDFLIVDVSIVSLTANALGYSELGAIKSLRTLRALR
PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTG
EMFSTDEVDNQTECENLIERNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAV
DSRNVEQQPHYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVET
DDQTDAMETILYRINFIFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLA
EIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCD
PEIDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSE
DDFEMFYEVWEKFDPDATQFIEFAKLSEFAACLDPPLLIPKPNKVQLIAMDLPMVSGDRI
HCLDILFAFTKRVLGESDEMDALRIQMEDRFMAANPSKASYEPITTTLKRKQEEVSAVII
QRAFRRYLLRQKVKKVSCLFNKDRIKEGNDTVIKEDMIIDKLNENSTPEKNDMTPSTASP
PSYDSVTKPDKDKYEKDKSEKEDRGKDVRDYKK
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccacttttttacgaaagag
tcactggcagctattgaacaacgcattgccgaggaaaaggcgaagaagtccaagcaagag
cgcaaagacgtcgatgatgatgaaaatggaccaaaaccgaatagtgatttggaggctggc
aaatccctgccctttatatatggagacatacctccggggatggtgtccgagccattggag
gacctggacccatattaccttaacaaaaaaacatttatagtattgaatagagggaaggca
atattccgattcagtgccacatctgctgtgtacctgttaactcctttcaaccctcttaga
aaaatagctatcaagattttggtacattcattattcagcatgcttattatgtgcactatt
ttaaccaactgtgtatttatgaccatgagtaatcctccagaatggacgaagaatgtagaa
tacacgttcactggaatttatacctttgaatcattaataaaaattcttgcaaggggcttc
tgtttagaagatttcacattccttcgggatccctggaattggttggatttcacagttata
acattcgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttc
agagtattgagagctttgaaaactatttctgtaatcccaggtaagaagntgagtggcttg
acgaagtgccaggaccctggtatttccagctgttttttgtgtgctgtcattgtgtttgtg
tgtgaactcccctattacagatatgtgacagagtttgtggacctgggcaatgtctcagcg
ttgagaacattcagagttctccgggcattgaaaacaatatcagtcattccaggcctgaag
acgattgtaggagccctcattcaatctgtgaagaagctctcagatgtcatgatcttgacc
gtgttttgtctgagtgtatttgcattaatagggctccaacttttcatggggaacctgagg
cataaatgcctgatttggccaccggacaattctacttttgaaataaacatcacttcctat
ttcaatagcacaatgggagaaaatggtacctttgtaaatacgacagtgaccacttttaac
tgggaagattatgtcagtgatgacagtcacttttacttcttggaaggacaaaatgatgct
ttgctgtgtggcaatggttcagatgcaggtcaatgtccagaaggatatatgtgtgtaaaa
gctggtagaaaccccaactatggctatacaagttttgataccttcagctgggccttcttg
tcactctttcggctgatgactcaggactactgggaaaatctttaccaactgactctgcgt
gctgctggcaaaacatacatgatcttttttgtcctggtgattttcttgggttctttctac
ctgatcaacttgatcctggctgttgttgccatggcttatgaagagcagaatcaagccacc
atggaagaagctgagcagaaagaggcagagttccagcagatgctggaacagctgaaaaaa
cagcaagaagaggctcaggcagcagctttagccgccgcagcaggtgaatcaagagaattt
agtgaagttggtggtgtaggtgggttctcagagagttcttcagcaacatcaaagttgagt
tccaagagtgctaaggagaggaagaacaggcggaaaaagagaaaacagagggaacagtct
gaaggagatgaaaaagatgaggatgaatttcacaaatcagaatcagaggacagcattcgc
agaaaaggctttcgattctctattgaagggaacagattaacctatgaaaaaagattttct
tccccacaccagtctttgctgagcatccgtggatcgctgttttctcccaggcgcagcagc
aaaacgagtctcttcagcttcagaggccgagcaaaagatcttggatcggagaatgatttt
gctgacgatgagcacagcacttttgaagacaatgagagtaggagagattccctctttgtt
cctcaccggcacagtgagcgtcgcaacagtaccatcagtcaggccagccgatcatctagg
gtgatgcctatccttccagcaaatgggaagatgcacagcactgtggactgcaatggggtg
gtttccttagttggcgggcctccttctcttatgtcacccactgggcagcttcttcctgag
ggtaccactacagaaacagaactaagaaaaagacgctccagttcctaccacatgtcaatg
gattttctctctgatcctactgcaaggcaaagagcaatgagtatagctagcatacttacc
aacaccatggaagaacttgaggaatccaggcagaagtgccctccctgctggtacaaattt
gctaacatgtgcttaatctgggattgctggactccttggctgaaaataaagcatattgtt
aatttgattgtgatggatccatttgttgaccttgctattaccatctgcattgttttaaat
actttgtttatggcaatggaacattacccaatgactcaacagtttaataatgtactgtcc
gttggaaatttggttttcactggcatcttcacagcagaaatgtttctcaaaataattgcc
atggatccttattattatttccaagaaggctggaatatttttgatggcatcatagtcagc
ctgagtttgatggagttgggtcttgcaaatgtggaaggattatcagttctaagatccttc
agattgcttcgagttttcaaactggcaaaatcttggccaacattaaatatgttgataaag
attattggcaattcagtcggtgccttgggaaatttgactttggttttggctatcattgtc
ttcatttttgctgtggttggaatgcaattgtttggcaaaaactacaaggaatgtgtctgc
aagatttccaatgactgtgaactcccacgctggcacatgaatgatttttttcattctttc
ttgattgtctttcgagttctttgtggagaatggatagagactatgtgggattgtatggag
gttgctggacaacccatgtgccttactgtcttcatgatggtcatggtgattggcaattta
gtggttttgaatctttttctggccttgctcctgagctccttcagttcagacaatcttgct
gctacagatgatgataatgaaatgaacaacctccaaattgcagtgtctaggattcagaaa
ggaatagattttataaaaagaaaagcccatgaatttgtacaaaaggcgtttgtgagaaaa
caaaaggctttggatgaaatcaagccccttgaagatctaaacaataagaaagacagttgc
atttctaatcatgtgatagtagatattggcaaagatttcaactatctgaaagatggcaat
gggactaccagcggaataggaagcagcgtggaaaaatacatcattgatgaaagtgattat
atgtcattcataaataacccaagtgtaactgttacagtacccattgctgttggagaatca
gattttgaaaatttaaatacagaggagtttagcagtgagtcagatctggaagaaagcaaa
gagaaactaaatgcaactagttcatctgaaggtagtacagttgatgttgggcttccccaa
gttggcgaacaacctgaagctgaacctgaagaatctcttgaaccagaagcctgttttaca
gagggctgcatccggaaattcaagtgctgccaagtcagtgtagaagatgggaaaggaaaa
ctgtggtggaatcttcggaagacttgttacaaaatcgtagaacataattggtttgagact
tttattgtcttcatgattctccttagcagtggtgctctggcttttgaagacatatacatt
gagcagcgcaagactatcaagaccgtgctggaatacgcagacaaggtcttcacttacatc
tttattttagaaatgcttctgaagtgggtggcttatggctttcaagtctattttacaaat
gcctggtgctggctggatttcctcattgttgatgtctctatcgttagcttaacagcgaat
gccttgggctactctgaacttggtgcaattaaatctcttaggactttaagagctttaaga
cctctaagagccttgtcacggttcgaaggaatgagggtagtggtgaatgctcttttggga
gcaattccatccatcatgaacgtgcttcttgtatgtcttatattctggttaatctttagc
attatgggagtgaatctgtttgctggcaaattctaccactgtgttaacaccacaactggg
gaaatgttcagcactgatgaagttgataatcagactgagtgtgagaatctcatcgaaaga
aatgaaacagccagatggaaaaatgtaaaagtcaacttcgataatgtgggtcttggctac
ctttctctgcttcaagtagccaccttcaaaggctggatggacatcatgtatgcagctgta
gattcacgaaatgtggagcaacagccacattatgaggataacctttatatgtatctttat
tttgtcatctttattatctttggatccttcttcactttgaatttatttattggtgtcatc
atagataacttcaatcagcaaaaaaagaagtttggaggtcaagacatctttatgacagaa
gaacagaaaaaatactataatgcaatgaaaaagctgggctccaagaaaccacagaaacct
atacccaggccagcaaacaaatttcaaggcatggtctttgattttgtaacaaaacaagcc
tttgacatcagcatcatgattcttatctgccttaacatggttaccatgatggtagaaact
gatgaccaaactgatgcaatggaaactattttgtatcgaattaattttatcttcatcgtc
cttttcactggagaatgtgtcttgaaactgatttcactccgctattattattttacaata
ggctggaatatttttgattttgtggttgtcatcttatctattgtaggtatgttcctcgca
gagattattgagaaatattttgtgtcccccaccttgttccgagtaattcgacttgccagg
ataggtcgaatcctgcgtctaatcaagggagcaaaggggatccgcactctgctttttgcc
ttgatgatgtctctccctgccttgttcaacatcggtctcctccttttcctggtcatgttc
atctatgccatatttggaatgtccaactttgcctacgtgaaaagagaagttggcattgat
gacatgttcaactttgaaacttttggcaacagcatgatctgccttttccaaattaccacc
tctgctggctgggatggcttgctagcacccatcctaaacagtgggcctccagattgtgac
cctgagatagaccatccgggtagctcagtcaagggagactgtggcaatccttcagttggg
attttcttctttgtcagctacattatcatctcatttttagttgtagtaaatatgtacatt
gctgtcattttggagaacttcagcgtcgctaccgaagaaagtgctgaacctttaagcgag
gatgactttgagatgttctatgaagtctgggaaaaattcgatccagatgcaactcaattc
atagagttcgccaaactctctgaatttgcagcctgtttggatcctcctcttctaatacca
aaaccaaacaaagttcagcttattgcgatggacctgcccatggtgagtggtgatagaatt
cactgccttgacatcttatttgctttcaccaaacgtgtcttgggtgaaagtgatgaaatg
gacgccctccgtattcaaatggaagaccggtttatggctgccaacccttcaaaagcctct
tatgaaccaatcaccaccacattgaaacgaaaacaagaggaagtatccgctgttattatt
cagcgagcctttaggcgctacctcttaaggcaaaaagttaaaaaagtttcctgcctgttt
aataaagatagaattaaagaaggcaatgacacagttatcaaagaagacatgatcattgat
aagctaaatgagaattctacccctgaaaaaaacgatatgaccccctccaccgcctctcca
ccttcctacgatagcgttacaaagcccgacaaagataaatacgagaaagacaaatcagaa
aaagaagacagaggtaaagatgtcagggactataaaaaatga
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integrated database retrieval system
