Auxenochlorella protothecoides: F751_0115
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Entry
F751_0115 CDS
T04132
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F751_0115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apro03021
]
F751_0115
03400 DNA repair and recombination proteins [BR:
apro03400
]
F751_0115
Enzymes [BR:
apro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F751_0115
Transcription machinery [BR:
apro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F751_0115
DNA repair and recombination proteins [BR:
apro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F751_0115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-GeneID:
23611506
NCBI-ProteinID:
XP_011400799
UniProt:
A0A087S9T5
LinkDB
All DBs
AA seq
1170 aa
AA seq
DB search
LPNLINIQQLSFKQFLEIGLISAIESQNPLKIKNTLYSFEVFYLSKYLQFKKPEKNITET
INLNKTYGCPIYLPILLKSNSQSKAIFEWIYLGFLPFMTKPGHFLINGIPRVALNQLVRT
PGIYKLIENKRTTKGIKAIPYIRIVPDKGSWLNISFDSKNRLWITTKIFRKKISMLVFLQ
ALEACKYLYSHFMEYRSPANKQRQPITEKKALLFFQQVVWNSENKYLGISGRDQFLKKLG
TTGSAFNQIQLTKQDFILITQTIINILYGEETIDDIDNLNNKKIRGCGDFLYQELARGLN
EFETLLDKKFKNFSLPRKKKKVKSGVLKKQKKVIKTTTWRSFFLGGTLSQYLDETNPLAE
ITHKRRITLLGPGGGNSKQTTIKIRGILPTYYGRLCPIETPEGQNAGLVHSLTVFGHKAS
NGTILTPYYKVYKGQTQNKLNVIFLNPEKESSHVLVPSDVLISKWGRLPKMSLPARKNWD
FDYAKLDQITTQSISILQMISLATSLIPFLEHDDANRALMGSNMQRQAVPLLKPEVALVK
TSLEPRVVSDINHIIQTRESGFITQVVSNSIQLYKPKTLKYFFIDIGEFTRNLKKVNIKY
NTIFIANNLLFPNALNFYYLHFPLNKNLLKFQKRNKNNFLSNFINSNQFTSYSKTIKKNK
ISLNNLKNNLNTKDFFLSAGNFLLIKEKVNQNKPKPLFLNNKRKKIDYKLFHLNLYKRGN
QSTCTLQRPIVAETDWVEKSTVLADGGASDKGKLAIGKNVFIAYLPWEGYNFEDAVLISE
NLVSQDIFTSLHLDYYQVEVQKTAAGLETITNDIPLNSSKEISQILNLDARGIIKKGTWV
KEGDYLVGKTSNVQLKGISAQYEKLYNAIIQREKLPVRNTSFRVPKGVEGLIVDVEIFPP
KQDDILFLAPKNSILCVKLSLLQRRRIQVGDKIAGRHGNKGVISKILPVQDMPYLPDGTP
IDVVLNPLGIPSRMNVGQILECLLGLAGKYLNESFTVNLFDEKFGTEASRSFVYSKLYQA
SLKSKNSWLFEPEHPGKIKLFDGRTGIIFQQPVTVGYTYMLKLVHMVDDKIHARATGPYS
ALTQQPVRGRARNGGQRLGEMEVWALQAYGAAYTLQELITIKSDDIDGRNEAVLRIFYNK
PIEMKQPERIKLLLREIQVLCISLEIFAPS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaatttaataaatatacaacaattaagttttaagcaatttttagagattggttta
atatccgcaattgaaagtcaaaaccctttaaaaataaaaaatacactttattcatttgag
gttttttatttaagtaaatacttacaatttaaaaaaccagaaaaaaatataacagaaact
ataaatttaaataaaacttacggatgccctatttatttaccaatattactcaaatctaat
agtcaatctaaagctatttttgaatggatctatttagggtttttaccgtttatgacaaaa
cctgggcattttttaattaatggaattccacgagttgcgttaaatcaattagtacgtact
cctggtatttataagttaattgaaaataaacgtacaactaaaggaataaaagcaatccct
tacatacgcatagttcctgataaaggaagttggctaaacattagttttgattctaaaaat
cgattatggattacaacaaaaatttttagaaaaaaaatatctatgttagtatttttacaa
gctttagaagcttgcaaatatttatattctcattttatggaatatcgatcacctgcaaac
aaacagcggcaacctataactgaaaaaaaagcacttcttttttttcagcaagtagtttgg
aattcagagaataagtatctaggtatttctggtcgtgatcaatttctaaaaaaattagga
actacaggttctgcttttaatcaaatacaattaacaaaacaagattttattttaattacg
caaacaataattaatattttatacggtgaagaaacaatagatgatatagataatttaaat
aataaaaaaattagaggttgtggagactttttatatcaagaattagctcgtggacttaat
gaatttgagactttacttgataaaaaatttaaaaatttttcattaccgcgtaaaaagaaa
aaagtaaaatctggcgttttaaaaaaacaaaaaaaagtaataaaaacaactacttggcga
agtttctttttgggaggaactttatcacaatatttagatgaaacaaatcctttagcagaa
atcacacataaaagacgtataacattattagggcctggggggggaaatagtaaacaaact
acaataaaaattagaggaattctcccgacttactatgggagactttgcccaatagaaaca
cctgaaggtcaaaatgcaggattggtgcattcacttacagtttttgggcataaagcttct
aatggtactattttaactccttattataaagtatataaaggacaaacccaaaataaactt
aatgttatttttttaaacccagaaaaagaatcttcacatgttttagttccttcagatgtc
ctaatttcaaaatggggacgtttgccaaaaatgagccttcccgctcgaaagaactgggat
tttgattatgccaaattagatcaaattacaacccaatctatttcaattttacaaatgatt
tcgttagcaacgagtcttattccgtttttagaacacgatgatgcaaaccgtgctcttatg
ggatcaaatatgcaacgacaggcagttcctttattaaaacccgaagttgcccttgttaaa
actagtttagagccgagagttgtatcagatattaatcatattatacaaacaagagagagt
gggtttattacacaagtagtttcaaattcaattcaattatataaaccaaaaactttaaaa
tatttttttattgatattggagaatttacaagaaacttaaaaaaagtaaatataaaatat
aatacaatttttattgcaaataatttattatttcctaatgcattaaatttttattattta
catttcccattaaacaaaaatttgttaaagtttcaaaaaaggaataaaaataattttctt
tcaaatttcattaattctaatcaatttacttcttatagtaaaacaataaaaaaaaataaa
atcagtttaaataatttaaaaaataatttaaacacaaaagatttttttctaagtgcaggg
aattttttattaattaaagaaaaggtaaatcaaaataagcccaaaccactttttttaaat
aataaaaggaaaaaaatagactataaacttttccacttaaatttatataaacgcggcaac
caaagcacatgtactcttcaacgaccaattgttgcagaaactgattgggtagaaaaatca
actgttttggcagacggtggagcgagtgataaaggaaaattagcgatagggaaaaatgtt
tttatagcttacttaccatgggaaggttataattttgaagatgctgttttaataagcgaa
aatttagtatctcaagatatatttacatctcttcatcttgattattatcaagtggaggtt
cagaaaacagcagcagggttagaaacaataacaaacgatatacctttaaattcatcaaaa
gaaatttctcaaatattgaacttagatgccagagggattataaaaaaaggaacatgggtt
aaagaaggggattatttagttggtaaaacgagtaatgtacagttaaaggggatttctgca
caatatgagaaactctataatgctattatacaacgtgaaaaattaccagttagaaacact
agttttcgtgtaccaaaaggagtagaaggccttatagttgatgttgaaatatttcctcca
aaacaagatgacattttatttttagcgccaaaaaattctattttatgtgtaaaattatct
cttttacagcgacgaagaattcaagttggggataaaattgctggtcgtcatggtaataaa
ggtgttatttcaaaaatattacctgttcaagatatgccttatttaccagatggaactcct
attgatgttgttctaaaccctttaggaataccatctcgaatgaatgtaggacaaatttta
gagtgccttttaggtttggctggaaaataccttaatgagtcttttacagtaaatttattt
gatgaaaaatttggaactgaagcttcaagaagttttgtatattcaaaactttatcaagct
tcattaaaatcaaaaaattcttggttatttgagcctgaacatcccggaaaaataaaactc
tttgatggacgtacaggtattatttttcaacagccagtaacagtaggatatacctatatg
ttaaaactagttcacatggttgatgataaaattcatgcacgggcaacaggaccttattcc
gctttaactcaacaaccggttcgaggacgagcaagaaatgggggacaacgtttaggtgag
atggaagtttgggcgttacaagcgtatggtgctgcttatactttgcaagaactaataact
ataaaatcggatgatatagatggtagaaatgaagctgttttgcgaattttttataataaa
cctattgaaatgaagcaacccgaaaggattaaattattattacgggaaattcaagtactt
tgtattagtttagaaattttcgctccttct
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integrated database retrieval system
