Auxenochlorella protothecoides: F751_6534
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Entry
F751_6534 CDS
T04132
Name
(RefSeq) Replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03030
DNA replication
apro03410
Base excision repair
apro03420
Nucleotide excision repair
apro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F751_6534
03410 Base excision repair
F751_6534
03420 Nucleotide excision repair
F751_6534
03430 Mismatch repair
F751_6534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apro03032
]
F751_6534
03036 Chromosome and associated proteins [BR:
apro03036
]
F751_6534
03400 DNA repair and recombination proteins [BR:
apro03400
]
F751_6534
DNA replication proteins [BR:
apro03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
F751_6534
DNA Replication Termination Factors
ELG1-RFC complex
F751_6534
Chromosome and associated proteins [BR:
apro03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
F751_6534
DNA repair and recombination proteins [BR:
apro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
F751_6534
Check point factors
HRAD17(Rad24)-RFC complex
F751_6534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
AAA_lid_RFC1
AAA_16
RuvB_N
AAA_24
SLFN-g3_helicase
Mg_chelatase
DNAX_ATPase_lid
AAA_11
AAA_14
AAA_assoc_2
AAA_30
AAA_5
ATPase_2
nSTAND_NTPase5
ResIII
nSTAND3
AAA_2
AAA_19
NPHP3_N
AAA_25
RNA_helicase
AAA_18
AAA_3
AAA_7
TIP49
NB-ARC
Motif
Other DBs
NCBI-GeneID:
23617925
NCBI-ProteinID:
XP_011402064
UniProt:
A0A087STG1
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MTVEQPWVEKYRPREIGDVASQGEVVKTLESALSSGNLPHLLFYGPPGTGKTTCALAIVR
QLFGADLLRARVLELNASDERGIAVVRNKIKSFAAISVGASPAGRSVPPYKVIILDEADA
MTTDAQAALRRTMETYSRVTRFIIICNYVSRIIEPLASRCAKFRFKPLHGTVIDDRINHI
CQVEGVQLGPDALCTLSRVAGGDMRRAITTLQSAVRLGGSPVRPQTLMDVAGVVPDAAAR
GLLHTCRESDFAGVQSAVADLIHEGYPAQEVLAEVQGAVLVDPGIDDVRKARVLERLALA
DKALIDGADEFLQLLAVASLTQRVILGQA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggagcagccttgggtggagaaatatcgaccaagggagatcggagatgttgct
tcccagggggaggtggtgaaaacgctggagagcgccctcagctccggcaacctcccacac
ctcttgttctatggccctcccggcaccgggaagacgacctgcgccctggccatagtccgg
cagctgtttggcgccgacctcctccgtgcgcgggtgctggagctgaacgcttccgacgag
cgcggcatcgcggtggtccgcaacaaaattaagtcctttgcggccatctcggtgggcgcc
tcgcccgcgggtcgaagcgtgccaccctacaaggtcatcatcctggacgaggccgatgca
atgaccaccgacgcccaagctgcgctgcggcggacgatggagacctactcccgcgtcaca
cgcttcatcatcatctgcaactacgtgtcgcgcatcatcgagcccctcgcctcccgctgc
gccaagttccgcttcaagcccctgcacggcaccgtgatcgacgaccgcatcaatcacatc
tgccaggtggagggcgtgcagctgggccccgacgcgctttgcacactgtcccgcgtggcg
ggcggagacatgcgccgcgccatcaccacgctgcagagcgcggtgcggctgggcggctcg
ccggtgcggccgcagacactgatggatgtggcgggggtggtgccggacgccgcggctcgc
ggcctgctgcacacctgccgtgagagtgactttgcgggcgtgcagtccgccgtggcggac
ctcatccacgagggctacccggcccaggaggtgctggcagaggtgcagggcgcggtgttg
gtggaccccggcatcgacgacgtgcgcaaggccagagtgttggagcggctggcgctggcg
gacaaggcgctgatcgatggcgccgacgagttcctgcagctgctggcggtggccagcctg
acgcagcgcgtcatcctcggccaggcgtga
DBGET
integrated database retrieval system