Amphimedon queenslandica (sponge): 100636010
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Entry
100636010 CDS
T02284
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100636010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100636010
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100636010
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100636010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
100636010
NCBI-ProteinID:
XP_019849661
UniProt:
A0A1X7VVP1
LinkDB
All DBs
Position
Unknown
AA seq
2367 aa
AA seq
DB search
MALNPRSYGLAQIQYLVASINKKNYRGNTSEIITLVEKHGVEAEKHLFRCLVTQVDFSGN
GGSDNRTNVTKDGQQLQFLIHESTQLITRRNFVSILCHSFENQENKTLRPVNQILTIVSK
VLKLSRVHEVVFALGLTESNDPDIKTHAMSHLKSKLPDLIRSYSDMSSGFEGGLGDVAVE
VLHLLLSYLLQRSEDETGGISADTVESFVQVLRRDFPRERVPVVLAPLLYQEQQDITEDR
LIPVSVTLPLSVSSIELAEIIRDVGYAATASKQDMLEILKDYGKINITPAVVARVLGMMA
QTHSDLSDSLPYMGVNSDPSRMQVKSPSCWDAKVLAIALQSLVPNLCWRDVVPEMDYEGF
YIPSTEGLNLIMTCFNVGSKDSFPIEMIYEPWLHTKGQLSWFQQALSSGSSFNFYNYPFN
PVNLEPLKNSFLGEEAKTWRSLSLIETLLNLAEQGHHCEVIELFRVPVKQCPEVFFLGLL
QCKTSWQVVETELLSHLLPNFINNHPTSSSVLSYIWHSSLGTPAVLALLIKVIADWYAQN
DYNDHTRILKILDICQDLKMLPIILKCNHFPFVIDLATWAAKRKFLKLDLWMIEKIKEVQ
DQFVQECIQFLVNHAPRPVAPSNETTGLTHDIVITMLACLQPYVTSLKSEYAQKLKMLIN
FHGPISSLPPRPAHPLSLGIDGGSGVVGGGGGGGGGDYPIPGSPAGVKSSFGQEILLSSP
IGGGGPVGGAGNSFGSGGKMMASYGPQSSQQVPDPVYFSVEQPSKDVDEKANAFFQAIYN
SRMSVNQLLEILRKFKDSSNKKEKDLFVCMLRNIFEEYKFFPQFPEKELHITGQLFGGIV
EHGLVTYMSLNLALRFIVDALKKPPSSKMYLFGLAALDKCKKRLKDFPQFCVNIASISHF
QTFPSQLKQYVQYGQQSMDPPLSVSGTSSLPGYSGLGHDSLGLIGSVSSNPIGSIGTPVG
TPGSIDLATPTSLPSLPSIATSNVYQPGPGSGNSPLSSPVVPEMGQFSPTATTASSSIAT
SSLGGVAVTSSISKTPVTAGNSPVSKPGAQQPPSINNTSIDTLLVAADLSDKKPPSQDLQ
DKVHFLFNNLSTSTLQQKVEEFTALVGDEYYDWVAQYLVMKRTSIEPNYHPLYMNFLDTV
NNYNLRKAVLKETYRNIKVILSSDKTSNNFSDRAILKNLGRWLGMQTLAKNKPILHIDLA
MKDLVLEAYHRGQQDLLYVVPFVAKVLEACADSKVFKPPNPWVMAIMTVLGELHAVHDLK
LNLKFEVEVLCKHLSLEISELPPSNFLSDTERAKKLCQLVSQKDKQSGTGTSPPQPLYPY
EDIPTTIQGIASLIQISPQIALLQQYPQLKQYVKSSIEKSIQDLLVPVADRSAKIALTTA
EQIIKKDFALDPEVSRMHAAAVHMVRHLTAGMAMITCREPLLLSICNNLKSAFSSVLRHP
VSNDEQLKQLIEQAALQLSADNTELASAFIQKTAVEKVVPEMEKRLTEEFELRQLARSER
RQYYNHVVLSYQVDKMPEQLRVNVGGPTPQQAVVYEEFARCLPGFLPSSKDTAKGDPASQ
FVPTEEFVHILTNCIKEITSQIRMIPPTQPTPHIIMMRSLLEMAIPLRINPTYVNVITLL
QKALEGLLEGMNPPPSEPDMFVSFRDSHILILRALQDQRALGPKSACFLVTKMLMEARED
IKYSPRALILLIGLQLVDMKQLDEFLAKAVENGRNLVALSCSIKLVNAIDSAERRETPIT
DNDLKKTKETLFRLTANVRQLPESTAQLLEPFCHEHEIRIASLNPEMGSSAPGMHSSMMH
HSSSGGSTGPASTGLSAAPGTTGELEDPPGLYEKVEYLLSEWVRHFHQPGLLRDGDKIYA
AYVARLQQQGILKNDDLIQRFFRISMEMCVELCYRTLNDPVNGGMSRPKCYHTMDAFVKL
VVVLVRYSGESSNTLAKVNLLNKVLLTVTQVLLADHEKRQVEFHQLPYHRFFIMILNDLC
SPDPVFDAINFPVLQCFCTAYHMVRPSKAPGFAYTWLELISHRVFVSKLLLQTPQQKGWP
LFHQLLIDVFKFLSPFLRNAELVKPTQTLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIP
PNCIQMRNLILSAFPRNMRLPDPFTPNLKVELLPDIQNAPRILPAYIQLIIPDLKKNLDN
YIKTRAPVTFLQELRGHLQISSEPGKQYNSSLINALVLYVGTQAIAFIHSKSGTPSPTTI
AHTAHMDIFQHLVVDLDTEGRYLFLNAIANQLRYPNSHTHFFSCALLSLFAETNHEAIQE
QITRVLLERLIVNRPHPWGLLITFIDLIKNPTYNFWKHDFVHCAPEIERLFESVAKSCMQ
KQPTTSASATSTSNSTRESTTDSSQQE
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatccacgctcttacggtctggcccaaatacagtacctggtcgccagcata
aataaaaagaactacagagggaacacatctgaaataatcactttggtagagaaacatggc
gttgaagcagagaagcacttatttcgttgtctggtcacacaagttgatttctctggtaat
ggtggcagtgacaacaggactaacgtcactaaagatggacagcagctccagtttttgata
cacgagtctacccaactcatcactcggaggaattttgtctcaattttatgtcacagtttt
gagaaccaagaaaacaaaacgcttcgtcctgttaatcaaatacttacgattgtctctaaa
gttttgaaactgtcaagagttcacgaggttgtgtttgctcttggtcttactgaaagtaat
gaccctgatattaagactcatgctatgagtcatctaaaatcaaagttgcctgacctcata
agatcttattcagatatgagctcaggttttgaaggtgggcttggtgacgttgctgtggaa
gtccttcacctgttactctcctaccttctccaaaggtctgaggatgaaacaggtgggatc
tccgctgacactgtagagtcctttgtacaggttcttagacgagattttccacgtgaacgt
gttcctgttgtattagctcctttattgtaccaggagcagcaagacatcactgaagatagg
ctgatcccagtatctgttactctaccattatcagtgagttctatagaattggcagagatt
atacgtgatgttggatatgcggctactgcttctaagcaagacatgttggagatattaaag
gattatgggaagattaacataacaccagctgtagtcgctcgagtccttggaatgatggcc
cagactcactctgatctctctgacagcttaccttatatgggtgttaattctgatcctagt
aggatgcaggtaaagagtccatcttgttgggatgcaaaggtccttgctattgcccttcaa
tcattggttcctaacctctgttggcgtgatgttgtacccgagatggactatgaaggtttt
tacattcctagtaccgaagggcttaacctgataatgacttgtttcaatgttggatcaaag
gactctttccccattgaaatgatatacgagccatggctccacactaaaggacagctctca
tggttccagcaggcattgagcagtgggtctagtttcaatttctacaattatccattcaac
cctgtcaaccttgagccattgaagaactcctttcttggggaagaagctaaaacatggcgt
tcattgagtctcattgagacattgctcaatttagctgagcagggccatcattgtgaagtg
attgagttgttcagggtaccagtcaaacagtgtcctgaagtattcttccttggtttactc
caatgcaaaacatcatggcaggttgttgaaaccgagcttctctctcatcttctccccaac
ttcattaacaatcacccaacgtcttcatctgttctcagttacatctggcacagctctctt
ggtacacctgctgtccttgcattacttattaaagttattgctgattggtatgcccaaaat
gattacaatgatcacaccagaatactcaagatattagacatatgccaggacctaaagatg
ctacctattatattaaaatgtaatcatttcccatttgtcattgacctggctacttgggca
gctaaaagaaagttccttaaacttgacctgtggatgatagagaagatcaaagaagtgcag
gatcagtttgttcaggagtgtatccagttcttggttaatcatgctcctaggccagtagcg
cccagtaatgagactactggcctaactcatgatatcgtcattacaatgttagcatgtctc
cagccatatgttacttcattaaagtcagagtatgctcaaaagttaaagatgctcattaat
tttcacggtcccatctcttcccttccacctcgaccagcccacccactcagccttggaatt
gatggagggtctggcgttgtgggaggaggaggaggaggaggaggaggagactatcctatc
cctggatcacctgctggggtcaagagttcttttggacaggaaattttactctcttcacct
attggagggggcggtcctgtgggaggggcaggcaactcgtttgggagtggtggaaagatg
atggcatcatacggaccacagtcatcacagcaagtaccagatccagtgtatttctctgtt
gagcaaccttctaaagatgttgatgaaaaggctaatgctttctttcaggcgatatacaac
agtagaatgagtgtcaaccagttactcgagatattaagaaaattcaaagattcgtctaac
aaaaaagagaaggacctctttgtttgtatgctacgtaatatctttgaagagtacaagttc
ttccctcagttcccagagaaagagctacatatcacaggacagctgttcgggggcatagtg
gagcacgggcttgtgacttatatgtcactcaacctagctctgaggtttattgtcgatgct
ttgaagaagcctccttctagcaagatgtacttatttggtttggctgcgctggacaagtgt
aagaaaagactgaaggatttccctcaattctgtgtgaacatagccagcatatctcacttc
cagactttcccgtctcaattgaaacagtatgttcagtacggtcagcaatcgatggatcct
ccactttcagtgtcagggacttcatcattaccaggctatagtggactaggacatgatagt
ttgggtctgattggttcagtatcaagtaatcccattggctctattggcactcctgttggt
acacctggtagcattgatctggccacacctacctccctaccgtccttaccttcaattgcc
acgtctaatgtgtaccagcctggccctggctctggcaacagtccactctcctctcctgta
gttccggagatgggccagttttcacctacagctactacagcatcatcttcaattgcaaca
tcttcactgggaggagtagcagtgactagtagtattagtaagactcctgttacagctgga
aacagtcctgtctctaaacctggcgcacaacagcctccttctataaacaatactagtatt
gatacattgctggttgcagctgatctctctgataagaaaccgccttcacaggatttgcag
gataaagttcactttctgttcaataatctctcaaccagtacacttcaacaaaaggttgag
gagtttactgcattagttggtgatgagtattatgattgggtggctcagtatcttgtaatg
aagaggacgtccattgagcccaactatcatccattgtacatgaacttccttgataccgtt
aataattataatctacgtaaagctgttcttaaggaaacctatcgtaatataaaggttatt
ctttcttctgacaagacaagtaataatttctcagacagggcaatattaaagaaccttggt
agatggttagggatgcaaacactagcaaagaacaagccaatcttacacattgacttagct
atgaaggacctggtgttagaggcttatcacagaggacagcaggatcttctttatgtagta
ccttttgttgctaaagtactagaggcttgtgcagatagcaaggtatttaagcctcctaat
ccatgggtgatggccattatgacggtattaggcgagttacatgctgtgcatgatcttaaa
ctgaatctgaagtttgaagtcgaagtactttgtaagcatttgtcactggaaatttctgag
ctgcctcctagtaacttccttagtgatacggagagagctaagaaactctgtcaactagtg
agtcaaaaagacaagcaatcaggtacaggtacatcacctcctcaaccattatacccatat
gaagacatacccaccaccatacaaggaatcgcttctcttatacagatcagccctcaaatt
gctctattgcagcagtatcctcagttaaagcaatacgtgaagtcatcaattgagaagtca
atacaagatctcttagtaccagttgctgatagatcggctaaaattgctctaaccactgct
gaacaaatcattaaaaaagattttgcattggatccagaagtgtcacgtatgcacgctgct
gctgtccacatggtacgtcacctcacagctggcatggctatgataacttgtcgtgagccg
ctactcctatcaatatgtaataacttgaagagtgccttctcgtctgtattaagacatcca
gtatcaaatgatgagcagttgaagcagctaatagaacaggccgcactacaactgagtgca
gacaacactgaactagccagtgcattcattcaaaagaccgctgttgagaaagttgtgcct
gaaatggagaaaagactcactgaagagtttgaattacgccagttagcaagatctgaaagg
agacaatattataatcatgttgtacttagctatcaagtggataagatgccagaacaactg
agagttaatgttggtggcccgactccacaacaagctgtagtgtatgaggaatttgcaaga
tgtcttcctggcttcctaccatcatctaaagacacagctaagggggatccagctagccag
tttgtgcctacagaggagtttgtccacatattaacaaactgcatcaaagagataacaagt
caaataagaatgataccaccgacccaaccaacgcctcacatcatcatgatgaggtctctc
ctggagatggcaataccactaaggatcaatccaacatacgtcaatgtcatcacactctta
caaaaagctttagaaggtttattggaaggaatgaatccgcctcctagtgaaccagacatg
tttgtcagtttcagggactcccacatactgatactaagagcattacaggatcaacgtgca
ctcggtcccaaatcagcctgttttcttgttactaagatgttaatggaagcaagggaagat
atcaagtacagcccgagagcactcattctcttaatcggactacagctagtggatatgaag
caactcgatgaattccttgccaaagctgttgaaaatggtcgtaaccttgttgctcttagc
tgcagtattaagttggtcaatgctatcgattcagctgagagacgagagacacctatcact
gataatgatcttaagaaaactaaagagacactgtttagactgacagctaatgttagacaa
ctgccggaaagcactgcccaattgttagagccattctgtcacgaacacgagatacgcata
gcatcattaaatcctgaaatgggaagctcggctcctgggatgcactcatcaatgatgcac
cattcctccagtggaggatccactggaccggcttctactggactatcagcagcacctggc
accactggagaactggaggaccctccaggactttatgaaaaagtggagtatttgttatct
gaatgggtcagacatttccatcagcctggtctgttaagagatggtgataagatatatgca
gcctatgtcgctagactacagcagcaagggattcttaagaatgatgatctcattcaaaga
ttctttcgtatcagtatggagatgtgtgttgaactatgctatcgtacactaaatgatcct
gttaatggtggcatgagtagaccaaagtgttaccatacaatggatgcatttgttaagctg
gtagtggtgttggtcaggtattctggtgaatcatcaaacacactagctaaagttaacctt
ttgaacaaagtcctattaacagtcactcaagtgttgcttgcagatcatgagaagagacaa
gttgagtttcatcagttgccatatcacaggttctttataatgatactcaatgacttgtgc
tctcctgatcctgttttcgatgccatcaatttccctgtgctccaatgcttctgcactgct
tatcacatggtaagaccatccaaagcaccaggctttgcttacacatggcttgagctaatc
tctcatagagtttttgtctctaagctactattacagacccctcaacaaaagggttggcct
ctcttccatcagttgctgattgatgttttcaagttcttgtctccgtttttacgcaatgca
gaacttgtaaagccaacacaaacactctataaaggcactctaagagtattacttgtcctc
cttcacgatttccctgagttcttgtgtgactatcacttctcattttgtgacgtcattcct
ccaaactgcattcaaatgaggaatcttatcctttctgccttccctaggaacatgagactg
cctgatcctttcactcccaacctcaaagtggaattattgcctgatatacagaatgcccca
agaatattaccggcctacatacagctaattataccagatttaaaaaagaatctagataac
tacataaaaacacgagctccagtaacattcctacaagaactaagaggacacttacaaata
tcgtcggaacctggtaaacaatacaattcatcactgatcaatgctcttgtgctatatgtt
ggcacacaagctatcgcattcattcacagtaagagtggtacaccgtctcccactactata
gcacacacggctcatatggacatattccaacaccttgtggtagacctagatactgaaggt
cgttacttattccttaatgcaattgctaatcagttaagatatcctaatagtcacacacac
ttctttagttgtgccctactctctctctttgctgagactaatcatgaagcaattcaagaa
cagatcacaagagttttattggagagattgattgttaatagaccacacccctggggccta
ttaatcacattcattgatctcattaaaaatcctacctacaacttttggaaacatgatttt
gtccactgtgcacctgagatagagaggttgtttgagtcagttgctaagagttgtatgcag
aagcaacccaccaccagtgcaagtgctaccagtaccagcaatagcacaagagaatcaacg
actgactcatcgcaacaagaataa
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integrated database retrieval system
