Amphimedon queenslandica (sponge): 100637972
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Entry
100637972 CDS
T02284
Name
(RefSeq) protein SCAF8-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100637972
03041 Spliceosome [BR:
aqu03041
]
100637972
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100637972
Spliceosome [BR:
aqu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100637972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_3
RRM_occluded
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
100637972
NCBI-ProteinID:
XP_011405937
UniProt:
A0A1X7U6H7
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MEVVDEFKEELHGLYNSKLPVSRAKIGAVTKLAMKAIKHYKHVVMIVEKFISKSSAPYKL
PALYVIDSIVRQSRHQFNETKEVYGPRFGKRLDKIMPLIHQCTEDDKPKVTRVLNLWQKN
SVFPPEVLQPLLDKAQPPPASSPQEQPSSTQPVLADGGADKKENKIKTDSATNNNISVQP
QDKIDDVLREQQDQLQNLLNSASTGSEQSGMLVALIDKAKQLQDLQSLQQEVMKGSGDIG
GRGGGDKGTGEKSKMSQQSVVANEFSKALLDNFDYSSDEDTDTKLPAPASISNDNNDAYA
IIDQLEEQFKREMEQGLNIKPPRVSRFHQPSPPPQSLPPPQSLPPTQLINPLSTTNTTSL
PSPPPPPPPPPPSSSHDFDWLAPDVHHSPSLRPPPHLPPPPLPPSHFPPVPPPHMPHLPP
SYHHLPPPPPRMQQNWREDKDWAPPSYHPPLPSIPHHYSRSPPTRRGHAPSPPSDRPYHR
ERSPIRHYDRGRRLDQSRYHDDERDRDRSHDNDYHYREREGRQRERDSRYHDDDRDYPSR
DRSHRSRRSSSSTKAGYVTVKSKTVWIGHIMKGVDKDQLSKMLEKYGAITSIDFIVARGC
AYVVMETREAAAKVVDQLRDIKVLGQKCKVAWAPGRGAKGKEFDPSWDVNTGISNISWDN
VKTKSQVEGLGNGGVVDTSTLPPQLREEEIAEVEMES
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgtcgatgaattcaaagaagagttacacggactgtataattcgaagcttcca
gtttcaagagctaaaattggtgctgtcactaaattagcaatgaaagcaattaaacattat
aaacatgtagttatgatagtagaaaaattcatatcaaagtcctcagctccctacaagctc
ccggcactctatgtcatagattctatagtccgtcagtccagacaccagtttaacgagact
aaggaggtctatggtccaaggtttggtaagagactggacaagataatgccactcattcat
cagtgtactgaagatgacaagccaaaagtaacccgtgtccttaacctgtggcagaagaac
agtgtctttcctcctgaagtcctccagccgttacttgataaagcccaaccccctccagcc
tccagtcctcaggaacaacccagctctacccagccagtcctagctgatggaggagcagac
aaaaaagaaaataaaataaaaaccgactctgctactaataataatatttctgtgcaacca
caggataaaatagatgatgtacttcgtgagcaacaggatcagttacagaacttgttgaat
tctgctagtactgggtctgagcagtctgggatgttagtggccctcattgataaggcaaag
cagcttcaggacttacagtcgctgcagcaggaagttatgaaggggtctggagatattggg
ggccggggagggggtgataagggaactggagagaagagtaagatgagtcagcaatccgtg
gtggctaatgagtttagtaaggcattgcttgataattttgattacagcagtgatgaagat
actgacactaaactaccagcacctgcttcgatatccaacgacaacaatgatgcttatgcc
attattgaccagctggaggagcaattcaaacgagagatggaacaagggttaaacatcaaa
ccaccacgagtctcaagattccatcaaccctctccgccccctcaatctctcccgccccct
caatccctcccgcccacacaactaattaatccgttatctaccacaaacactacatcactt
ccttcccctcctcctcctccccctccccctcctccttcctcctctcatgattttgattgg
ttggctcctgacgttcatcactctccctcactccgtcctccccctcaccttcctcctcct
cctctccctccctctcactttcctccggttcctcctcctcacatgccacacctcccacca
tcttatcatcatctccctcctcctcccccaagaatgcaacaaaattggagagaagacaaa
gattgggctcctccatcctaccaccccccactgccctccattcctcatcattattcacgg
tctccgcccaccagacgaggccacgcccccagcccaccttcagacagaccctaccacaga
gagagaagtccaatacgtcattatgaccgtgggcggagattggaccagtctcgttaccat
gatgacgagagggaccgtgaccgttcccatgacaacgattatcattatcgggaaagggag
ggacggcagagggaacgggactctcgttaccacgatgatgatagggactacccctctcgt
gataggtcacatagaagccgtcgctcctcatcttcgactaaagccggctatgtaacagtt
aagagtaagactgtgtggatcggtcatatcatgaaaggagtagataaagaccagctgtca
aaaatgttagaaaaatacggagcaataacttcaattgattttattgttgctcgtgggtgt
gcctatgttgtcatggaaactcgtgaggctgcggctaaagtagtagatcaactgagagac
ataaaagtcctcggacagaaatgcaaagttgcttgggccccaggacgtggtgcaaaaggg
aaagagtttgatccgagttgggatgtgaacactggtatcagtaacatatcatgggacaat
gtgaagacaaagtcacaagtggaaggactgggtaatggaggcgtggttgatactagtaca
ctcccacctcagctacgggaagaagaaatagctgaagtggaaatggagagttga
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