Amphimedon queenslandica (sponge): 105311956
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Entry
105311956 CDS
T02284
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03013
Nucleocytoplasmic transport
aqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105311956
03015 mRNA surveillance pathway
105311956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
105311956
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105311956
mRNA cycle factors
P-body specific factors
105311956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
105311956
NCBI-ProteinID:
XP_011402510
UniProt:
A0A1X7VE34
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MATISASKYALKRAEKELNQTKVVLRHLPADYTEQDLLELINSERPGYTSPQYTSFYFVP
GSESNSSLPSYSRAYFEIPVFDDIKNLRDTFDGLQLGSKTDRGPKSRLIVEFAPYQGSLL
QRCKTDPRCDTITKDSEYVSFLEEYEKETAHLPSIDISYLDTVEHVAEVQPTPLVDFIKE
RKIARRSGGSRNKVLYATGGGKKKKTRETRVIEIKEKPSSSSKDKQWKEKGSGVDKKSSS
YQDKGSGQERKGSGYQDKGSGHEKKSKDFDRGKTNGDQASGGEGGGSNRKKGDDSKSKER
PDQALYSPRSRRSGNEDKRYERSSKGDDKRGGSSRNEDSRRGGYSDDRRSMRSEERKGGR
SDERRGGDERRSDRQYDKTSSRSSYDKRSGSGYYREDSSRSHYKHGGKTSSGYHATTDNY
YHFQDDDEPSYEAHRGSGKKREEYSERDDRRYYGNRRNYDDTKKYRQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctaccatttctgccagtaaatatgcactcaaaagagccgagaaggagctcaatcaa
actaaagtagtcctacgtcacttgccagccgattacactgagcaggacctccttgagctg
atcaactcggagaggcccgggtacacttcgcctcaatacacttccttttacttcgtccca
ggatcagaatccaattcctccctcccctcctactctcgtgcttatttcgagataccagtc
tttgacgatatcaagaacctaagggatacctttgacgggcttcaattagggtcaaaaacc
gacagaggtccaaaaagccgattaatagtggaatttgctccgtatcaaggaagcctactg
cagcgctgtaagacggacccacgctgtgatactataacaaaggattcagaatatgtctcg
ttcctcgaggaatacgaaaaagagacagctcacttgcccagtattgatatatcgtatctc
gatacagtagaacatgttgctgaagtgcaaccgacgcctctcgttgatttcataaaggag
aggaagattgcccgcagatctggagggagtaggaataaggttttatatgcgacaggtggg
ggcaaaaagaaaaagacaagagagacgagagtgatagaaataaaagagaagccttcttcc
tcgagtaaggacaagcaatggaaggagaaggggtccggggtcgataaaaagagttccagt
taccaagataagggttccggtcaagagaggaaggggtctgggtatcaggataaggggtcc
ggtcatgaaaagaaaagtaaagactttgataggggaaagactaatggggaccaagcaagt
ggaggagaagggggaggctcgaatagaaagaaaggagatgactcgaagagcaaagagaga
ccagatcaagccttgtattcacctcgaagtagaagaagtgggaatgaagacaagagatat
gaaagaagcagtaaaggagatgataaaagaggaggaagcagtagaaatgaagacagcagg
agaggaggatattctgatgataggaggagcatgagaagcgaggagagaaagggagggaga
agtgatgaaagacgtggcggggacgaaaggagaagtgatagacagtatgataaaacaagc
agcagatcaagctatgataagagaagtgggagtggttattatagagaggactcatcaagg
tctcactataaacatggtgggaagacatcttctggctatcatgcgacgactgataattat
tatcattttcaagatgatgatgagccttcatatgaggcccatcgtgggagtgggaagaag
agagaagagtactcggagagggacgatcgacgttactatggaaacaggaggaactatgat
gataccaagaaatatagacagtag
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