Amphimedon queenslandica (sponge): 105312824
Help
Entry
105312824 CDS
T02284
Name
(RefSeq) tetratricopeptide repeat protein 37-like isoform X1
KO
K12600
superkiller protein 3
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105312824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
105312824
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105312824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_2
TPR_1
TPR_14
TPR_11
TPR_19
TPR_CcmH_CycH
TPR_8
TPR_17
ANAPC3
TPR_12
DUF7017
ARM_TT21_C
TPR_21
Vta1_C
RPN7
Motif
Other DBs
NCBI-GeneID:
105312824
NCBI-ProteinID:
XP_019852270
UniProt:
A0A1X7UUC1
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MAASKEVKSLLKSARSALDREDYPEAIKQCQAIFWHDDTHYLAHVLCGKAHLLLKEVGEA
RHQYRIAITSNEKEILAWKGLADLYDKYSPEDKDEKLEAIKTYSHILNTVTGDGEKEFNL
YCKLAPLYVDVGQLEKAAGAYLYLLVSPSASGSITEKSLLFLLRHPQYSQTQWQLIEGSY
KSFLSSLTETKRIEIQTLFISSCMEWIKLVEDEEVIDSLLKTVQEECEMLESKENQETLL
QLEIWKCLKVLSIQPLTEEDLIAITLLLDKRGEEEEEEREGVWLISHCLVLLQSRKIKEA
CTLASKGTVSLPDSCEGWFVSCVCHMKAHDYEVVINNARKGLEALGSLPYFIRRQVSHSF
HILLIEAQLLEGNHKQEALTSCEKLYSESCDCHVIRLYVKALIANGMIHEAEGIINDKAS
LLNEEKGILNELKGHLFVARGDFDQAHDKFQLAINECPQFSEYHYWAGYTNWYNGNRTKS
YPSLVKAGQLDSYNPAVFNMLGHYQRHVANDINRAVKCYKKAFTIHPGLTEAGISLGECL
SALGEEESAYEVYLKITEKSPPTEAREAWLRIGLYHRRHSQYDEAIKCYLKVLHQNVSDS
NVWECLGEAYLSRGSNIAAMKAFEKATELNPQSIFSQYQVAAIQQLIGLLSEAVASYTRV
LELQDDYVPALKGRAESYYKLSLLAINNVLDSKAVSYVSLALIDLSKAVKLKPSFISLWK
LIGDSCLSLYSIAETVARVSVPSELLGNDEGLEIIGKKALLELGLKSYKCSLHLCDGKSP
YLLHNLALNYYHLAEVEDDKDVSKEYLEISLKLIKNAITLSPRGHTHWNALGVIAMHSIL
KDYALAQHSFISSLKIEPNNAVVWSNLGALYLINDNVKLAHLSFERSQSCDPMYSQGWIG
DGLVAEIFGKSEETRNFLENVSELQYHDESALGYAYWVCKTLTEGAPSHSLKAHQSLVQA
RDGILKYVRRYPKDSLALNLLGLLYEHEGMMKQAKESISLSLSHMKEEGGSGYLPLVMHN
HARLLSVTGSHSEALSCYESLVAMEAPDVRLGQALALFRARKFSEAAKMYQLLVDDCDPD
SKSQLLLALSMCSFAVEDNESCKNLLFKVFQTPPPSLHGIVSLAAFAGYVSDPVLLKATL
AELLKITESSIASLSESCLFALHSLSSMCDEDKEVLEVFDKIINANTSSVTVNQKPHMSL
ILRSLSDLSLDESLRAIQKVVHTHPGYLWAWPMIPYIMIVMGSVDKNPSLVGGYLKLAQS
KAEEYCTEKSEKDKSAQSLIDWCKLLSNLIVGSK
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagtaaagaggtcaaatctcttcttaaatcagctcgttctgctctagacaga
gaagactatcctgaggctatcaaacagtgtcaggctatattttggcatgatgacactcat
taccttgctcatgtgttgtgtggtaaagctcatttactgctaaaagaagtaggagaggcc
agacaccagtacaggatagcaataacctctaatgagaaagaaatactggcctggaagggc
ttggcagatttgtatgataagtacagcccagaggataaagatgaaaagttggaagcaatt
aagacttacagtcatatactaaacactgtgactggagatggagaaaaagaattcaatttg
tattgtaaacttgctccattatatgtggatgtaggccaattagaaaaggcagctggagct
tatttatatcttttagtctctccctctgcctctggttccattactgagaagtcattatta
tttctactacgtcatcctcaatattcccagacccagtggcagctaattgaaggcagttat
aaatccttcctttcttctctgacagagactaagaggatagagatacaaacattattcatt
agctcctgcatggaatggattaagttagtggaagatgaagaagtgattgatagtttattg
aagacggtacaagaggaatgtgaaatgctagaaagtaaagagaaccaagagacattactc
cagctggagatatggaagtgtttaaaagtactgtccattcaaccactaactgaagaggat
cttatcgcaataacactgttactggacaagagaggagaggaggaggaggaggagagagaa
ggagtgtggctcatttctcattgtttggtattactacaatcaagaaaaataaaagaagct
tgcacactagccagtaaagggacagtctctttaccagactcctgtgagggctggttcgta
tcatgtgtctgtcacatgaaggcacacgactatgaagttgtcattaataatgctcggaaa
ggattagaagctttgggaagtttaccttatttcatacggagacaagtatcacattcattc
catatcttactaattgaggctcaactcctggagggtaatcataaacaagaggctttaact
tcatgtgaaaagttgtacagtgagtcatgtgactgtcatgtgatcagactgtatgttaag
gctctcattgctaatggaatgatacatgaagctgaaggaattattaatgataaagcttcc
ttgctcaatgaggagaaaggaatactgaatgaattaaaaggtcatttatttgtggctaga
ggtgattttgatcaagcacatgacaagtttcagctagctataaatgagtgtcctcagttc
agtgagtatcattattgggctggttataccaactggtataatggaaatagaacaaagtct
tatccttcactggtgaaggcaggtcagttggatagttataatccagctgtatttaatatg
ctgggacactatcagagacacgttgctaatgatatcaatcgtgctgttaaatgttataaa
aaggcatttactattcatcctggtctaactgaggctgggatatcattaggggagtgtctg
tcggcattgggtgaagaggaatctgcttatgaagtttatctcaaaattacagaaaaatct
ccacctacagaggcgagagaggcgtggcttagaataggactatatcatagaagacatagt
caatatgacgaagctattaaatgttatttgaaagttttgcatcagaacgtttctgatagc
aatgtatgggagtgcttaggtgaggcttatctctcaagaggtagtaacattgcagcaatg
aaagcatttgaaaaagcaactgaactcaatccacagtccatattctcacaataccaggta
gcagctatacaacagttgattggtctgttatctgaagctgttgccagctacacacgagtc
cttgagctacaggatgattatgtaccagctttgaaaggtagagctgagagctattataag
ttgtcactgctagccatcaataatgtactggactccaaagctgtctcctatgtatcgctt
gctcttattgatctatccaaagcagtaaagctaaaaccctcattcattagtctgtggaaa
ctgattggagattcttgtctctccttatatagcattgccgaaactgttgctagggtcagc
gttccttccgagttgctaggcaacgatgagggattagaaattatcggtaaaaaggcttta
cttgaacttggactgaaatcatacaagtgcagccttcatttgtgtgatggcaaatctcct
tatcttcttcacaatcttgcacttaattattaccacctagcagaggttgaagacgataaa
gatgtctcaaaagaatatttagaaatctcattaaaattgattaaaaatgcaatcactcta
tcaccgagaggccacactcactggaacgccctcggagtaatagcaatgcactctattctc
aaggattatgctttggctcagcattcatttatttcttcattaaagattgaaccaaataat
gcagtagtgtggagtaatcttggtgcactttacctcatcaatgacaatgttaaattggct
catttatcattcgaacggtcccagtcgtgtgacccaatgtattctcaaggttggattggt
gatgggttagtcgctgaaatctttggcaagtcggaggagaccagaaacttcttggagaac
gtcagtgaacttcaatatcatgatgaatcagcattaggttatgcttattgggtatgtaag
acactaacagaaggagctccttctcactctctcaaagctcaccagagcctagtacaagct
agggacggtatattgaaatacgtcagacgttatcctaaagactctcttgccctcaatctc
ctgggattgctctatgaacacgaggggatgatgaaacaagccaaagagtctataagtctc
tcactatcacacatgaaagaagaaggaggtagtgggtacttacctcttgtgatgcataac
cacgccaggttgctgagtgtgaccggatctcactccgaagcgttgagttgttacgagtca
ctagttgccatggaagcaccggacgtcaggctgggacaagccttggcactgtttagggca
aggaagttttcagaagcagcaaaaatgtatcagttacttgtggatgattgtgatcctgat
agtaagtcccagctattgctggcattatcaatgtgttcgtttgctgttgaagacaacgag
agctgcaagaacctcctgtttaaagtttttcaaactccgcctccttccttacatggtatt
gtatcgttggctgcttttgctgggtatgtcagtgacccagtgcttctcaaagcaactctg
gcagaattattgaaaataactgagtcaagtatagcctcgttgagtgagtcttgccttttt
gctttacattcattatcttcaatgtgcgacgaggataaggaggtgttagaggtatttgat
aaaatcatcaatgctaacaccagtagtgtcactgttaatcagaaacctcacatgtcatta
atattaagatctctctctgatctttctttggacgaatctctcagggccattcaaaaagta
gtacatacccacccgggttatttatgggcgtggccaatgatcccgtacattatgatagtg
atgggtagtgttgataagaatccttcacttgttggtggatatttgaaactagctcaaagc
aaagctgaagagtattgcacagaaaaaagtgaaaaagacaaaagtgcccagtcccttatt
gactggtgtaaacttctttctaatttaattgttggctcaaaataa
DBGET
integrated database retrieval system
