Aquihabitans sp. G128: KSP35_02525
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Entry
KSP35_02525 CDS
T07304
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aqz
Aquihabitans sp. G128
Pathway
aqz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSP35_02525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqz03019
]
KSP35_02525
03009 Ribosome biogenesis [BR:
aqz03009
]
KSP35_02525
Enzymes [BR:
aqz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KSP35_02525
Messenger RNA biogenesis [BR:
aqz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KSP35_02525
Ribosome biogenesis [BR:
aqz03009
]
Prokaryotic type
rRNA helicases
KSP35_02525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CreS_N
Cas3-like_C_2
WSD
Motif
Other DBs
NCBI-ProteinID:
QXC61739
LinkDB
All DBs
Position
complement(552165..553892)
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AA seq
575 aa
AA seq
DB search
MSADQPADVPAFVDLGLRSELVDALATLGYEEPTPIQAEAIPPFIQGRDLLGQAATGTGK
TAAFALPILERMEKDRASGAPMALVLVPTRELAMQVSEAIHRYGRPLGARVLPIFGGQPI
SRQLQALRRGIDVVVATPGRAIDHINRGTLPLDEVEVVVLDEADEMLDMGFAEDIEAILT
ETPPTRQTVLFSATMPGRINAIAKRHLTDPVRIEIARPTVASGDAPKVRQTAYLVPRSHK
AAALGRILDVESPTAAIVFCRTRLEVDELTETMNGRGYRAEALHGGMDQEQRDRVMNRLR
AATADLLVATDVAARGLDIDQLTHVVNFDVPSAPESYVHRIGRVGRAGREGVAITLAEPR
QHRMLKNIERITKQKIAIEKVPTVADLRTRRMELTRATLEEMILEGGLDPYRTVVETLAD
EYDVMEVALAAVKLAHESSGAAADEEEIPDIQPRPEGKAWDKDGKGKGAKGKPWDKDKPG
AKGDKAGRPARGTSEGMTRLYVAAGRSAGIRPGDLVGAIAGETDLSGRDIGSIEIADRFS
LVEVPEGGADQVIEAMKRTTLKGKKVTFRRERYES
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaccaacccgccgacgtcccggccttcgtcgacctcggcctccgatccgag
ctggtcgacgccctcgccaccctgggctacgaggagccgacgcccatccaggccgaggcc
atcccgcccttcatccagggccgggacctgctcggccaggccgccaccggcaccggcaag
accgccgccttcgccctccccatcctcgagcgcatggagaaggaccgcgccagcggcgcc
cccatggcgctggtcctggtgcccacccgcgagctggccatgcaggtctccgaggccatc
caccgctacggccgcccgctcggcgcccgggtgctgccgatcttcggcggccagcccatc
agccgccagctgcaggccctgcgccgcggcatcgacgtcgtggtggccacccccggccgg
gccatcgaccacatcaaccggggcaccctgccactcgacgaggtcgaggtcgtggtcctc
gacgaggccgacgagatgctcgacatgggcttcgccgaggacatcgaggccatcctcacc
gagaccccgcccacccggcagaccgtgctgttctcggccaccatgcccggacgcatcaac
gccatcgccaagcggcacctcaccgacccggtccgcatcgagatcgcccgccccaccgtg
gcctccggcgacgccccgaaggtccgccagaccgcctacctcgtgccccgctcgcacaag
gccgctgcgctgggccgcatcctcgacgtcgagtcgcccaccgccgccatcgtcttctgc
cgcacccggctggaggtcgacgagctcaccgagaccatgaacggccggggctaccgggcc
gaggccctgcacggcggcatggaccaggagcagcgcgaccgggtcatgaaccgcctgcgt
gccgccaccgccgacctgctggtggccaccgacgtcgccgcccgcggcctcgacatcgac
cagctgacccacgtcgtcaacttcgacgtgccctcggcgccggagtcctacgtgcaccgc
atcggccgggtgggccgggccgggcgagagggcgtggccatcaccctggccgagccccgc
cagcaccggatgctcaagaacatcgagcgcatcaccaagcagaagatcgccatcgagaag
gtgccgacggtggccgacctgcgcacccggcgcatggagctcacccgggccacgctcgag
gagatgatcctcgagggcggcctcgacccgtaccggaccgtggtcgagaccctggccgac
gagtacgacgtcatggaggtcgccctcgccgcggtgaagctggcccacgagtcgagcggt
gccgccgccgacgaggaggagatccccgacatccagccccgtcccgagggcaaggcctgg
gacaaggacggcaagggcaagggcgccaagggcaagccgtgggacaaggacaagcccggc
gccaagggcgacaaggccggccgccccgcccggggcacgagcgagggcatgacccggctc
tacgtggccgccggtcgcagcgccggcatccggcccggtgacctggtgggcgccatcgcc
ggcgagaccgacctcagcggccgcgacatcggctccatcgagatcgccgaccggttctcc
ctcgtcgaggtccccgagggcggcgccgaccaggtcatcgaggccatgaagcgcaccacc
ctcaagggcaagaaggtcaccttccgccgcgagcgctacgagtcctga
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