Ascochyta rabiei: EKO05_0007197
Help
Entry
EKO05_0007197 CDS
T09445
Name
(RefSeq) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
arab
Ascochyta rabiei
Pathway
arab00040
Pentose and glucuronate interconversions
arab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EKO05_0007197
Enzymes [BR:
arab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EKO05_0007197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
62220724
NCBI-ProteinID:
XP_038792342
LinkDB
All DBs
Position
12:complement(join(330350..330796,330848..331053,331103..331269,331321..331430))
Genome browser
AA seq
309 aa
AA seq
DB search
MHGLASLLVCLASQLGAVAAASLTDVCTVGYCTLGAGTSGGQGGPTVIVSTLEALENAVT
GNDPRIVVVSGTISGAKRVYVGSNKSIIGRSGKIIGIGLSIVNATNVIIRNTIHQKVPST
FEDAITIFRSTNVWVDHVDLSADRDHDKDFYDGLVDVTRASDFVTISNSYLHDHWKGSLV
GHSDNNQAEDGGHLRVTYANNHFFNIASRGPMFRIGTGHIFNNYWNQMDDAVRTRAGAQL
LIESSVFENTNDCIFAKNGYAVVRDVDLGIGTNEAPVGTLASVPYTYTLLGSAKVKAAVV
GVAGATLAL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtctcgcttcgctccttgtgtgtctggccagtcagcttggtgcggtagctgct
gcctcactgaccgacgtttgcacagtcggctactgtactctaggtgccggtacttccgga
ggtcaaggcggacccaccgtcatcgtatcaacgctcgaagctttagagaatgctgtcaca
ggaaacgatcctcgcattgtagtggtttctggtaccatctcgggtgcgaagagggtgtac
gtcgggagcaacaagtcgatcataggccgctctggcaaaatcattggtattggcctttcg
attgttaacgcaaccaacgttatcatcagaaatacgatccaccagaaagtgccatcgact
ttcgaggatgcgattacaatcttccgctctacaaatgtgtgggtggaccacgtagacctg
agtgccgacagagatcatgacaaggacttttacgatggacttgtcgatgtgacccgagct
tcggactttgtcaccatctccaacagctatttgcatgaccattggaaaggctctctagtc
ggccactccgacaacaaccaagccgaggatggcggccatctgcgggtaacatacgctaac
aaccacttcttcaacatcgccagccgtggacccatgttccgcattggtacaggtcatatc
ttcaacaactactggaaccaaatggacgatgccgtccgaacgcgtgctggtgctcaattg
ctcatcgagtctagcgtctttgagaacacgaacgattgtatctttgcgaaaaacgggtac
gctgttgtgagggatgttgatctaggcattggcacaaacgaggcgccggttggtacgctc
gcgagcgtgccatacacgtacacgctgctgggatctgcgaaggtcaaggcggcggttgtg
ggcgttgcgggcgcgacgttggcattgtga
DBGET
integrated database retrieval system
