Ascochyta rabiei: EKO05_0009148
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Entry
EKO05_0009148 CDS
T09445
Name
(RefSeq) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
arab
Ascochyta rabiei
Pathway
arab00040
Pentose and glucuronate interconversions
arab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EKO05_0009148
Enzymes [BR:
arab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EKO05_0009148
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
62217321
NCBI-ProteinID:
XP_038795754
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Position
16:join(674536..675057,675107..675433,675485..675583)
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AA seq
315 aa
AA seq
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MRFFEIATVLAAAGAVQAAPMEKRAAAVDELVGFAAGTTGGGSGAGTTVSDCAGLTAAAK
KGGVIKVKGTLTGCGIVKIVSNTSVLGVGANAGLTDGGFQVRKADNVIIRNLKFYRAPKG
KDLVDIDASTRVWVDHNDFSSVGITGDKDTYDGLLDAKHGADSLTFSWNKFHDHWKGSLV
GHSDNNAGEDSGKLRVTYHHNDFQKVNSRLPSVRFGTAHVYSSCYNGGISGVNSRMGAQV
LVENTSFTGVERAIVTNLDSDEEGSANERNNLFTSSTTEITKKNTWTPSYKYTADAAASA
CSIVAKSAGVGVVTF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttcgagattgctactgtccttgcggccgctggtgccgtccaggctgctccc
atggagaagagggctgccgccgtcgatgaacttgtcggttttgccgccggcacaaccggt
ggtggaagcggagctggcacgactgtcagcgactgcgccggtctgactgctgccgcgaag
aagggcggtgtcatcaaggtcaagggtaccctcactggatgcggcatcgtcaagatcgtc
agcaacaccagtgtccttggagttggcgccaacgcaggtcttaccgatggtggcttccag
gtcaggaaggcggataacgttatcatccgtaacctgaagttctaccgcgcacccaaggga
aaggaccttgtcgatattgacgcttctactcgtgtctgggttgaccacaacgacttctcc
tccgttggcatcactggtgacaaggacacctacgatggtctcctcgatgctaagcacggc
gccgattcgctgaccttctcctggaacaagttccacgaccactggaagggctccctcgtc
ggccactccgacaacaacgccggcgaagacagcggcaagctgcgcgtcacctaccaccac
aacgacttccagaaggtcaactcccgcctcccctcggtccgtttcggaaccgcccacgtc
tacagctcgtgctacaacggcggtatctccggcgtcaacagccgcatgggagctcaggtc
ctcgttgagaacacctccttcaccggtgtcgagcgggctattgtcaccaacctcgactcg
gacgaggagggctccgccaacgagcgcaacaacctcttcacctcctcgactaccgagatc
accaagaagaacacctggactcctagctacaagtacaccgccgacgccgctgcctctgct
tgcagcatcgttgccaagtctgctggtgttggtgtcgtcaccttctaa
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