Rhizosphaericola mali: E0W69_011490
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Entry
E0W69_011490 CDS
T06233
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
arac
Rhizosphaericola mali
Pathway
arac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E0W69_011490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arac03019
]
E0W69_011490
03009 Ribosome biogenesis [BR:
arac03009
]
E0W69_011490
Messenger RNA biogenesis [BR:
arac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E0W69_011490
Ribosome biogenesis [BR:
arac03009
]
Prokaryotic type
rRNA helicases
E0W69_011490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QES89258
UniProt:
A0A5P2G3F8
LinkDB
All DBs
Position
complement(2677421..2679118)
Genome browser
AA seq
565 aa
AA seq
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MITFEELGLEEQLVKATSDLGFVNPTAIQEKAIPALINGAKDLIGLAQTGTGKTAAFGLP
LLQMIDKDQKFPQALVICPTRELCLQIVKEITAFKKYLPTVSVVAVYGGSSIGLQIKDLK
RGVQIVVATPGRLIDLIERKAIHLEEIKYVIMDEADEMLNMGFQDDIEFILQNTPIREYT
WLFSATMPNEIRRVTKKYMSDPMEITVGAVNTANKNIEHQYYVTSAAYRYETLKRLIDYN
PGIYGIIFTRTKMDAQNIAEKLTREGYNIDALHGDLSQPQRDKVMKAFRDKSLQLLIATD
VAARGIDVQGITHVINYELPDDVEVYTHRSGRTGRAGMTGVSLSIVHSRESFKLRQIEKI
VKAPFHKMDIPSGTEVCRKQFLFFMDKLLNLDIETTSLDAYMPMLMEKFADVSKEEILKR
LSVLEFDRFLKYYENANDLNIRDDRGRNSQRNGRENRDGGRDRSNRGERSEGRSRERFPR
NDENSDMAKLFVNLGTKDGFYKASFLQYILDLSDLKKEVLGRIDMREMNSWVEIDKKSAN
KMIKAIDGKNYKGRRIRMNDANSRG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgataacatttgaagaattgggtttagaagagcagttggtaaaggctaccagtgatcta
ggcttcgtaaatcctacagccattcaggaaaaagcaattcctgcattaatcaatggcgct
aaagatttaataggtctagctcagacaggtaccggtaaaactgccgcttttggtctacca
ttgttacaaatgatagataaagatcaaaagttcccacaagctttggttatctgtcctaca
cgtgaattgtgtttacaaattgtaaaagagattaccgcatttaaaaaatatttgcctacc
gtgagtgtagttgcagtatatggcggttcttctattggcctacagatcaaagatcttaag
aggggcgtacaaattgtagtcgcaacccctggtcgtttgattgacttaatcgaaagaaag
gcaatccatttagaagaaattaagtatgtcatcatggatgaagcggatgaaatgcttaat
atgggttttcaagatgatattgaattcattttgcaaaatactcctatcagagaatatacg
tggttatttagtgctactatgcctaatgaaatcaggagagttaccaaaaagtatatgtcc
gatccaatggaaattaccgttggtgcagtgaatactgctaacaaaaatattgaacatcaa
tattatgttacgagtgcggcatatagatatgaaacgttgaaaagattgatagactataat
cctgggatttatggtatcatctttacacgtactaaaatggatgcgcaaaatatagctgaa
aaattaacaagagaaggctataatatcgatgcattacatggagatttatcacaacctcaa
cgtgataaagtaatgaaagcttttagagataaaagtttgcaattattgatcgcaacagat
gttgcagctagaggtatagacgttcaaggtatcacgcatgtaatcaactatgagttacct
gatgatgtggaagtttacacacacaggtctggtcgtacaggtagagcgggtatgacgggt
gtaagtttgagtatcgttcactcccgtgaatcattcaaattacgtcagattgaaaagatc
gtaaaagcgcctttccataaaatggatattccaagtggaactgaagtttgtagaaaacaa
tttttgtttttcatggacaaacttttgaatttggatattgagacaactagtttggatgct
tacatgccgatgcttatggaaaaatttgcagacgtaagtaaagaagaaatcttgaaaaga
ttgtccgtattggaatttgaccgtttcttgaaatactatgaaaatgcgaatgatctaaat
atcagagacgatcgtggacgcaatagtcaacgcaatggaagagaaaatagagacggcggt
agagacagaagtaatcgcggagaaagatctgaaggtcgcagtcgtgagagatttccaaga
aatgatgaaaatagcgatatggctaaattatttgtcaacttaggaacgaaagacggattt
tacaaagctagcttcttacaatacattttagatttgagtgatttgaaaaaagaagtattg
ggtagaatcgatatgcgtgaaatgaatagttgggttgagattgataaaaaatcggctaat
aaaatgattaaagcgatcgatggtaaaaactataaaggtcgccgtatcagaatgaatgat
gccaatagtagaggataa
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