Amycolatopsis rhabdoformis: VSH64_35850
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Entry
VSH64_35850 CDS
T09694
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
arhd03110
]
VSH64_35850 (clpB)
Chaperones and folding catalysts [BR:
arhd03110
]
Heat shock proteins
HSP100
VSH64_35850 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
Mg_chelatase
IstB_IS21
nSTAND3
AAA_7
AAA_25
TniB
bpMoxR
NACHT
T2SSE
AAA_24
NBD_SMAX1
AAA_19
DNA_pol3_delta2
FTA4
Mis12
EcoEI_R_C
Motif
Other DBs
NCBI-ProteinID:
WSE28177
UniProt:
A0ABZ1I199
LinkDB
All DBs
Position
complement(7781985..7784579)
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AA seq
864 aa
AA seq
DB search
MDAFNPTTKTQQAISSAAQAATMAGNPHVSAAHLLGALLAQGEGLTAPLLTAVGADPEVV
HKELDPIIHALPSATGATVSSPQFDANAVKSLTHAQKLATELGDEYVSTEHLLVGLATEG
GEVAQLLKRHGATPDALREAFAKVRGSARITSADPESTFKALEKYGVDLTERARAGELDP
VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKRVVA
LDLGSMVAGAKYRGEFEERLKAVLKEITDSAGEVVTFIDELHTIVGAGATGEGAMDAGNM
IKPMLARGELRMVGATTLDEYRQHIEKDAALERRFQQVLVGEPSPEDTIAILRGLKERYE
VHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASKLRMEIDSRPVEIDEVERA
VRRMEIEEMALSKEDDAASLERLSVLRAELAEKRETLTALTARWQNEKGSIERVRELKEQ
LEQLRGESERAERDGDLGKAAELRYGRIPALEKEFEAATEASAVSQQNVMLKEEVGADDV
ADVVSAWTGIPAGRLLEGETGKLLRMEEELGRRVIGQEQAVQVVSDAVRRARAGVADPDR
PTGSFLFLGPTGVGKTELAKGLAEFLFDDERAMQRIDMSEYSEKHSVARLVGAPPGYVGY
DQGGQLTEAVRRRPYTVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILIL
TSNLGSQAIADPSLDEGQRRDAVLETVQRQFKPEFLNRLDDIVVFHALGTEQLTSIVDIQ
VARLSARLAQRRLHLDVTAGAREWLALNGFDPIYGARPLRRLVQSAIGDQLAKKLLSGDI
RDGDTVRVDIPALEAGDTLTVERV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcaacccgaccacgaagacccagcaggccatttcgtcggcggcacaggcg
gccacgatggccggcaacccgcacgtttcggccgcccacctgctgggcgccctgctggcg
cagggtgagggccttaccgcaccactgctgacggcggtcggggccgaccccgaagtggtg
cacaaggaactcgacccgatcatccacgcgttgccgtccgcgaccggcgccaccgtgtcg
agcccgcagttcgacgccaacgccgtgaagtcgctcacgcacgcgcagaagctcgccacc
gagctcggtgacgagtacgtgtcgaccgagcacctgctcgtcggcctcgccaccgaaggc
ggcgaagtggcgcagctgctcaagcgtcacggcgcgactcccgacgcgctgcgcgaggcg
ttcgcgaaggtgcgcggttcggcgcgcatcacgagcgccgacccggagagcacgttcaag
gcgctggagaagtacggcgtcgacctgaccgagcgcgcccgcgccggtgagctcgacccg
gtgatcggtcgtgacacggagatccgccgcgtggtgcaggtgctttcgcggcgcaccaag
aacaacccggtgctgatcggtgagccgggcgtcggcaagacggcgatcgtggagggcctg
gcccagcgcatcgtcgccggtgacgtgcccgaatcgctgcgcggcaagcgcgtggtggcc
ctggacctcgggtccatggtggccggcgcgaagtaccgcggcgagttcgaggagcggctg
aaggccgtgctcaaggagatcacggactcggccggcgaggtcgtcacgttcatcgacgag
ctgcacaccatcgtcggcgccggtgccaccggcgagggcgcgatggacgccggcaacatg
atcaagccgatgctcgcccgcggtgagctgcggatggtcggcgcgaccacgctcgacgag
taccgccagcacatcgagaaggacgcggctctggagcggcgtttccagcaggtgctggtg
ggcgagccgtcgccggaggacacgatcgcgatcctgcgtgggctcaaggagcgctacgag
gtgcaccacggtgtccgcatcaccgatgccgcactggtggccgccgcgacgctgtccgac
cgctacatcaccgcccgcttcctgccggacaaggcgatcgacctggtcgacgaggccgcg
tcgaagctgcgcatggagatcgactcgcgccccgtggagatcgacgaggtcgagcgcgcg
gtgcggcgcatggagatcgaggagatggcactgtccaaggaggacgatgccgcgtctctg
gaacggttgtccgtgctgcgcgccgagttggcggagaagcgcgagacgctcacggcgttg
accgcgcgctggcagaacgagaagggttcgatcgagcgcgtccgcgagctcaaggagcag
ctggagcagctgcgcggcgagtcggagcgcgccgagcgcgacggtgacctgggcaaggcc
gccgagctgcgctacggccggattccggcgctggagaaggagttcgaggccgcgaccgag
gcgtcggcggtgagccagcagaacgtgatgctgaaggaagaggtcggcgcggacgacgtg
gctgacgttgtttcggcgtggaccggcatcccggccggccggctgctcgaaggcgagacg
ggcaagctgctccgcatggaggaggagctcggccgccgcgtgatcgggcaggagcaggcc
gtgcaggtggtgtcggacgcggtccggcgcgctcgggccggtgtggccgaccccgatcgg
ccgacgggttcgttcctgttcctcggccccacgggcgtcggcaagaccgagctggccaag
ggcctggccgagttcctgttcgacgacgagcgcgcgatgcagcgcatcgacatgagcgag
tactcggagaagcactccgtggctcgcctggtcggcgcccctccgggctacgtcggctac
gaccagggcggccagctcaccgaggccgtccggcggcgcccctacacggtcgtgctgctc
gacgaggtcgagaaggcgcacccggacgtgttcgacgtgctcctgcaggtactcgacgac
ggtcgcctgaccgacggccagggccgcacggtggacttccgcaacaccattctcattctc
acgtccaacctcggttcgcaggccatcgcggacccgtccctggacgagggccaacgccgc
gacgcggtgctggagacggtgcagcggcagttcaagccggagttcctgaaccgcctcgac
gacatcgtcgtgttccacgccctcggcaccgagcagctgacgtccattgtggacatccag
gtcgcccggctgtccgcgcggctggcccagcgccggctgcacctggacgtcacggccggc
gcccgcgagtggctcgccctgaacggcttcgacccgatctacggtgcccgaccgctgcgc
cgcctggtgcagtcggcgatcggggatcagttggcgaagaagctgctctcgggagacatc
cgcgacggtgacactgtgcgggtggatatcccggctttggaggcaggggacacgttgacg
gttgagcgggtctga
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