Acinetobacter radioresistens: DOM24_03295
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Entry
DOM24_03295 CDS
T05620
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
arj
Acinetobacter radioresistens
Pathway
arj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
arj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DOM24_03295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arj03021
]
DOM24_03295
Transcription machinery [BR:
arj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DOM24_03295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DinB
Motif
Other DBs
NCBI-ProteinID:
AWV85655
UniProt:
A0A125SVD4
LinkDB
All DBs
Position
complement(719168..721057)
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AA seq
629 aa
AA seq
DB search
MSDMHSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APESDDAMFEDNAEAADEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLHSIAYWPNAVEVVLKEYKDYQEGERRLADILSGYLDPESDEEIPE
VIEDAVLEEDEDETASKSTKEVKLDDDEEEEEESESDDDSEADSGPDPEIAKVRFTELET
VWQETKSVIEKHGRDSAEAKAALEALASVFMMFKFTPRLFDIISEMIRGTHEQIRTSERE
IMRYAVRRGRMDRTQFRTSFPGQESNPGWLDEQMAKASPDIKGHLEKVRPDVLAFQQKIA
DIEKELGLNVIDIKDISKRMAIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLI
QEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINR
VSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIED
QNITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRE
RIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgcattcccctacttctcaagtagcggctctgattagccgaggcaaagaa
caaggttacctaacttacgctgaggttaacgatcatctcccagactcaatcactgaaagt
gaacagattgaagacattatccagatgcttcaggatgtgggtattcctgtacacgaacgt
gctcctgaatctgatgatgcgatgtttgaggataacgccgaagctgccgatgaggtagcc
gaagaagaagctgcagctgttcttgcttcagttgaaaatgagccaggccgtactacagac
cctgtacgtatgtatatgcgcgaaatgggtactgtcgagcttttaacccgtgaaggcgag
attagcattgctaaacgtattgaagaaggtattcgcgacgttcttcactctattgcttac
tggccaaatgcagttgaagttgtattaaaagaatataaagattatcaagaaggcgaacgt
cgtctggccgatattctttcaggctatcttgatccggaatctgatgaagaaattcctgaa
gtgatagaagatgctgtactggaagaagatgaagatgaaactgcttcgaaatcgaccaag
gaagttaaacttgatgacgatgaagaagaagaggaagaatctgaatcagatgatgattca
gaagcagattcgggcccggatcctgaaattgccaaagttcgtttcaccgagcttgagaca
gtctggcaagaaactaagtcagtaattgaaaagcatggtcgtgatagtgcagaagcaaag
gctgcacttgaggctctggcatctgtatttatgatgtttaagtttactccgcgcctcttt
gatattatttctgaaatgattcgtggtacgcatgagcaaatccgtacttccgaacgtgaa
attatgcgctacgcagttcgtcgtggccgtatggaccgtacccagttccgcacctccttt
ccaggacaggagtcaaacccaggctggcttgatgaacaaatggcaaaagcatctccagat
attaaaggtcatctagaaaaagttcgtcctgatgttttggcattccagcagaagattgct
gatattgagaaagaacttggtctgaacgttattgatattaaagatatctctaaacgtatg
gcaattggtgaagctaaagctcgtcgtgccaaaaaagagatggttgaggccaacttgcgt
ctggtaatctcgattgccaaaaaatataccaaccgtggactgcaattcctggatttgatt
caggaaggtaatattggcctgatgaaagccgtagacaagttcgaataccgtcgtggctat
aagttctcaacttatgctacctggtggattcgtcaggcaatcacccgctcaattgccgat
caggcacgtaccatccgtattccggtgcacatgattgaaacaattaacaagatcaaccgt
gtatcacgccagttacttcaggaaatgggccgcgagccaacaccggaagagctgggtgaa
cgtctggaaatggatgaggtgaaggtacgtaaggtacttaaaattgccaaagaaccgatt
tcaatggaaacaccaattggtgatgatgaagactcgcatctgggagatttcattgaagac
cagaacattacctctccggtagatgctgcaacttcagaagggttaaaagaagcaacacgt
gaagttttagaaaacttaaccgaacgtgaagctaaagttctgaaaatgcgatttggtatc
gacatgccaactgaccatacattagaagaagtgggtaaacagttcgacgttacccgcgaa
cgtatccgtcagattgaagccaaagctttacgtaaattgcgtcatccatcccgctctgag
cacttacgttcattcctggaaaatgactaa
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