Athalia rosae (coleseed sawfly): 105687058
Help
Entry
105687058 CDS
T09776
Name
(RefSeq) sodium channel protein para isoform X8
KO
K04834
voltage-gated sodium channel type II alpha
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aroa04040
]
105687058
Ion channels [BR:
aroa04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105687058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_7
EF-hand_6
SieB
Motif
Other DBs
NCBI-GeneID:
105687058
NCBI-ProteinID:
XP_012257818
LinkDB
All DBs
Position
1:13482293..13524666
Genome browser
AA seq
2039 aa
AA seq
DB search
MSEDSDSISEEERSLFRPFTRESLAAIEARIAEEYAKQKELEKKRAEGEGGFGRKKKKKE
VRYDDEDEDEGPQPDPMFEQGAPIPVRLHNDFPPELSSTPLEDIDSFYHNQRTFVVVSKG
KDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTIEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKNFPEDGSWGNLTAENWERFVSNDTNWYVDEGGNMPLCGNSSGAGMCDAGYTCLQGYGS
NPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVN
LILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAALAKENKLAAQAAAREAAAAAAAADQ
IVKSPSNFSCHSYELFVGQEKGNDDNNKERMSIRSVESVSEHRVKPPNNNHSSASNKVRK
VSAASLSLPGSPFNLRRGSRGSHQFTIRNGRGRFVGPPGGDRKPLVLSTYLDAQEHLPYA
DDSNAVTPMSEENGTIVVPVYYASLGSRHSSYTSHASRLSYTSHGDLLGGIAGAGKPMTK
ESRLRSRSARPPSGNGHVTDQNHKHLYDGDMEDPMGKVKQQDNPFIEPSQQHAVVDMKDV
MVLNDIIEQAAGRQSKASDHGVSIYYFPTDDDEEGPALKEKLVALCIQGINIFCVWDCCW
AWLKFQEIVALVVFDPFVELFITLCIVVNTLFMALDHHDMDRDMEKVLKTGNYFFTTTFG
IEATAKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS
WPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPDGDLPRWN
FTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSN
FGSSNLSAPTADNDTNKIAEAIDRIARFIQWVKRNLFNLFKMMRAKFTNQISDQAPDGID
RDGDLDLADGELDGYRDKKNAKDLNNQLEVAIGDGMEFTIHGDLKNKLKKGKLCMNNTKA
IGNSINHHDNRMEHEYMNHHEEDTISHKSYGSHKNRPFKDESHKGSVDSLDGEEKKDASK
EDLDQEGSLLDLEEEGEEGEEELNGELIIQTDEELIEADYPADCCPDNCYKKFPFLAGDD
DAPFWQGWANLRLKTFQLIENKYFETAVITMILLSSLALALEDVHLSSRPILQDILYYMD
RIFTVIFFLEMLIKWLALGFKKYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMR
TLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKC
VDANKTTLSHEIIPDRNACIAENYTWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAI
DSRDVNKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMT
EDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDMIIMLFIGLNMLTMTLD
HYQQSKTFSDVLDYLNMIFIVIFTSECLMKIFALRYHYFKEPWNLFDFVVVILSILGLVL
SDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVM
FIFAIFGMSFFMHVKDKSGLDDVYNFKTFTQSMILLFQMSTSAGWDGVLDGIINEEDCQE
PNNEIGYPGNCGSSTIGIAYLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDY
DMYYEIWQQFDPDGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIVSMDIPICKGDLMFCV
DILDALTKDFFARKGNPIEETAELGEVQARPDEAGYEPVSSTLWRQREEYCARLIQNAWR
KHKKQRLGGPSEESDDPDTDPRGRQTAVLVESDGFVTKNGHRVVIHSRSPSVTSRTADV
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagactctgactccatatcagaggaagaacgcagcttgttccgtccgtttacg
cgggaatccctggcagcaatcgaggctcgtatcgctgaagaatatgccaagcagaaagaa
cttgagaagaagcgcgccgaaggcgagggaggttttggccggaagaaaaagaaaaaagaa
gtacgatacgacgacgaagacgaagatgagggacctcagccggatccgatgttcgagcaa
ggtgcgcccataccggtccgactacacaacgactttcccccagaactatcctctactcct
ctcgaagatattgatagcttctaccataatcagaggacattcgtggtcgtcagcaagggc
aaggacatattcaggttctcggcgacagatgcgctctggattttggatccgttcaaccca
atcagacgggtggccatttacattttggtccacccgttgttctcccttttcatcatcacc
acaattttggttaactgcatactcatgatcatgccgacaacgcccaccatcgagtcaacc
gaagtgatatttacgggcatctacacatttgagtccgccgttaaggtgatggcgaggggt
ttcattctgcagccttttacctatcttagagatgcatggaattggctcgacttcgtagta
atagctttagcttatgtgaccatgggcatagatctaggaaaccttgctgctctgaggaca
tttcgagtccttcgagccttgaagactgtcgctattgtaccaggtctgaaaaccatcgtc
ggtgccgtaatagagtccgttaaaaatctgagggacgtaataatcctcaccatgttctcc
ttatctgtatttgcgctaatgggtcttcagatatacatgggcgtgttaacgcaaaagtgt
ataaaaaatttcccagaggatggctcatggggtaaccttactgccgaaaattgggaacga
ttcgtcagcaacgatacaaattggtacgtggatgagggtggaaacatgcctttgtgtggc
aattcatctggagctgggatgtgcgatgctggttacacgtgtttgcaagggtatggttcg
aatccaaactacgggtatacgagtttcgacaccttcggttgggcgttgttatctgcgttt
cgtttgatgactcaagattactgggaaaatctttaccagttggttttgaggtcagcggga
ccctggcacatgcttttcttcatcgtcatcattttcctcggttcgttttatctggtcaac
ttgatcctcgctattgtcgccatgtcttacgacgagttgcagaagaaggcggaagaggaa
gaggctgcggaagaagaagcaataagggaagctgaggaagcggcactggcgaaagagaac
aaacttgctgctcaggctgcagcgagagaggcggcagcggctgctgcagctgctgatcaa
attgtcaagtcgccatcgaacttctcttgtcacagttacgagctttttgttggtcaggag
aagggcaacgacgacaacaacaaggagagaatgagcatacgttccgttgagtcggtgagc
gaacacagagtgaagccaccaaacaacaatcacagcagtgcctcgaacaaagtccgaaaa
gtcagtgccgctagccttagcctgccagggtctcctttcaatcttcgaaggggtagtcgg
ggaagtcatcagtttacgatacggaatggccgaggtcgtttcgttgggcccccaggcggg
gaccggaaacccctcgttctttcgacgtacctcgacgcccaagaacatttaccatacgcc
gatgattcgaacgccgttacaccgatgtccgaagagaatggcaccatcgttgttcccgtt
tactacgcgagcctgggatccaggcattcctcctacacctcgcacgcctccagattatcc
tacacgtcccacggggatcttcttgggggtatcgccggtgctgggaaaccaatgaccaag
gaaagccgactgaggagtaggtcggcgagaccaccatccggaaatggacacgtgaccgat
cagaaccacaaacacctttacgacggagacatggaagatccgatgggcaaagtaaagcag
caggacaatccgttcatcgaaccttcccagcagcacgctgttgtcgacatgaaagatgta
atggtcctgaacgatatcatagaacaggctgcgggaaggcagagcaaagcttcggatcat
ggagtttcgatctattactttccgacagacgacgacgaagaaggtccagcgctcaaagaa
aaattagtggccttatgcatccaaggtataaacatattttgtgtctgggattgctgttgg
gcttggcttaaatttcaagagatcgtggcacttgtggttttcgatcctttcgtggagctc
ttcatcaccctttgtatcgtagtcaacaccctcttcatggcgctggatcatcacgacatg
gacagggatatggaaaaagtactcaagaccggaaactacttttttacaaccaccttcggc
atcgaagcaacggcgaagctaatcgcgatgagccccaagtattacttccaggaagggtgg
aatattttcgactttatcatcgtagctttgtccttgttggagttgggtctcgagggagtt
caaggactgtcggtgttacgttccttccgattgttgagagtcttcaagcttgcgaaatct
tggcctaccttgaatctgctgatctcaatcatgggccgaacggtgggcgctctcggtaac
ttgacgtttgtcttgtgtatcatcatcttcatctttgccgttatgggaatgcaattgttt
ggaaaaaattacaccgacaacgtcgatcgatttccggacggggatcttcctcgatggaat
ttcaccgacttcatgcactcctttatgatcgtttttcgtgtactgtgcggcgaatggata
gaatcgatgtgggactgtatgctggtaggagacgtatcctgtataccctttttcctcgca
acggttgtcattggtaacttagtcgttctaaatctcttcttggccttgcttttgagcaac
ttcggttcctcgaatctctccgcaccaacggcagacaacgacacgaacaaaattgccgaa
gctatcgaccggatagctcgattcatacagtgggtgaagcgaaatctctttaacctgttt
aaaatgatgcgagcaaagttcaccaaccagatatccgatcaggcgccagatggaatcgat
cgcgatggagatttagatctagcagatggtgagctagatggctacagagataagaaaaat
gcaaaagatctaaacaatcaactagaagtggccattggcgatggaatggaattcaccatc
catggagatctgaaaaacaaactcaagaagggaaagttgtgcatgaataataccaaggca
atcggtaattccataaatcatcacgacaacagaatggaacacgagtacatgaatcaccac
gaagaggatacgataagtcacaaatcatacggaagtcataagaatcgtccgttcaaggac
gagagtcacaaaggaagcgtagattcgttggatggagaagagaaaaaagatgccagcaag
gaagaccttgatcaagaaggttcgttattagatctggaggaagaaggcgaagagggtgaa
gaggagctgaacggagagctcatcatccagacggacgaggaactcattgaagcggattat
ccggccgattgttgtccggataactgttacaagaaattcccatttttggccggtgatgac
gacgctcctttctggcaaggctgggcgaatttgaggctcaaaactttccaattgatcgag
aacaagtacttcgagaccgccgtaatcacgatgatcttgctcagtagtctagcgctggca
ttggaggacgtccacctttcatcgaggccgatccttcaggacattttgtactatatggac
cgcatattcaccgtaatattcttccttgagatgttgatcaaatggcttgctctgggattc
aaaaagtatttcacaaacgcctggtgctggctcgatttcatcatcgtcatggtctccctc
attaacttcgtagcgtcgctctgtggcgcagggggaattcaagccttcaaaacaatgcgg
accctaagagccctaagaccgctcagggcgatgtctagaatgcaggggatgcgggtggtc
gtaaacgctttggtacaagccatcccgtctatcttcaacgtgttgctggtgtgcctgata
ttctggttgattttcgccatcatgggtgttcagttattcgctggaaaatacttcaagtgc
gtcgacgcgaacaaaacgacgttgagccacgaaataataccggacagaaatgcctgtata
gccgagaattacacatgggaaaattctccgatgaacttcgaccatgtcgggaaagcgtac
ctgtgcctatttcaggtggcgactttcaagggatggattcaaataatgaacgacgccatt
gattcgagagatgtaaacaaacagcccattcgcgagacaaacatctacatgtatctctac
ttcgtatttttcattatattcgggtcatttttcactctgaatttgttcatcggagttatc
atcgacaacttcaacgagcagaaaaagaaggctggaggatcgttggaaatgtttatgacg
gaggatcagaagaagtactataacgccatgaaaaaaatgggaagcaaaaaaccgctgaag
gccattccacggcctaggtggagaccacaagcgatagtgtttgaaatagtgacggacaag
aagtttgacatgataatcatgttgttcatcggacttaacatgttaacaatgacgctggat
cattaccagcaaagtaaaacattcagtgacgtgctggactacctgaacatgatattcata
gtgatattcacgagcgagtgtctgatgaagatattcgccctacgttaccactatttcaag
gagccatggaacctgtttgattttgttgtcgttatattatcaatattaggtctggtactc
agcgatattatcgagaagtatttcgtctcgccaacgttacttcgagtcgtacgagtggcc
aaggttggtcgagtacttcgattggtgaagggtgcaaagggtatcagaacccttttattc
gccctcgccatgtccctgccggcgctattcaacatctgcctactactcttcctcgtgatg
ttcattttcgccatattcgggatgtcgttcttcatgcacgtcaaggacaaaagtggactc
gacgacgtgtacaatttcaaaacgttcacgcagtcaatgatactgttgttccagatgtcc
acctcggccggttgggacggggtgctcgacggaataatcaacgaggaggattgccaggag
ccaaacaacgaaattggttatcctggaaactgcggttcttcgaccataggaatcgcatac
ctcctgtcgtacctcgttataagttttctgattgtaataaacatgtacatcgctgtaatt
ctcgagaattactcgcaggcaacggaagatgtccaagagggtctcaccgacgacgattac
gacatgtattacgaaatatggcaacaattcgatccggatggaacacaatacataagatac
gaccagctatcagaatttctcgacgtgctcgagccaccgttgcaaatacacaaaccaaac
aagtacaagattgtgtcgatggatatccccatatgtaagggtgaccttatgttttgcgtg
gacattctcgatgcactcaccaaagacttcttcgctagaaagggtaaccctattgaggaa
acggcggagctgggcgaggtgcaagcaagaccggacgaggcgggctacgagcccgtctct
tcgaccttgtggcgtcagcgcgaagagtactgcgctcgcctcatccagaacgcctggcga
aagcacaagaagcaacgactcggtggcccgagtgaggagagcgatgaccccgacaccgac
ccccggggtcgacagactgctgttcttgtcgagagcgacggtttcgtgacaaaaaacggt
catagggtcgtcatccacagtcggtcgccgagcgtaacgtcacgcacggcggatgtctga
DBGET
integrated database retrieval system
