Athalia rosae (coleseed sawfly): 105688020
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Entry
105688020 CDS
T09776
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aroa03016
]
105688020
Enzymes [BR:
aroa01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
105688020
Transfer RNA biogenesis [BR:
aroa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
105688020
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
105688020
NCBI-ProteinID:
XP_012259446
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All DBs
Position
7:12950606..12953149
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AA seq
475 aa
AA seq
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MDKNNASCQRMLHLREPKRKKRSRIKPNAPFPINIGPENKWIMYTGHLSSLGVCVIESCE
IEALHSMGFFGKGALSRSFPNFEKSKTGVHTILRERQWKRRQTWLQQAQILKGLTDDFGE
EEWGNIGQLDSEKESEQCQQGVGDTSIKDSKPEQRKDSKLEKNNQNIDPIKKPNPSSLES
HKAIENPKSKVEVVLDASNEDEIYKISNTEKVGAVAFDVSNDVNTTLSDDEAMSIDLYKR
LDETKNQLGCIDQKPAIQERDWMILPDSDSDSGDYLNTIKPSVEKEGFPIKEPLYLTFEE
TFFLMFGLGCLQVINYDGNMMNILEAWNHFCRVQHDFVQKYVVYHYFRSKGWVVKPGLKY
GGDFLLYKQGPPFYHASYIVIVEVLNADTLLKDTKKMVRKMTWTKLASLDRLSETAAKEI
LFAQVLWPPEVSKDEISFSPEFLSEFTVNELLYRRWIPKQKREEIDLENDIELHE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggataagaacaatgcctcttgtcagaggatgctgcatctaagagaaccaaaaaggaaa
aaaaggtcccgaattaaacccaatgcacctttcccaataaatattgggccagagaataaa
tggatcatgtatactggtcatctcagctcgttaggagtatgtgtcatagaatcttgtgaa
attgaagccctacattctatgggtttttttggtaagggagcattgtcacgcagttttcca
aattttgaaaaaagtaagactggtgtacataccatcctgagggagagacagtggaaaaga
aggcagacctggctgcaacaagctcaaattctaaaaggtcttacagatgactttggagaa
gaagaatggggaaacattggacaacttgactctgaaaaagaaagtgaacaatgccaacaa
ggagtcggagataccagtataaaggacagcaaacccgaacaaaggaaggactccaaactc
gagaaaaacaatcaaaacattgatccaattaaaaaacccaacccaagctcacttgaatct
cataaagctatcgaaaatccaaaatctaaagtagaagttgttctggatgccagcaacgaa
gatgaaatatataaaatctcgaatactgagaaagtgggagcagtagcttttgatgtttct
aatgatgtaaatactacattatcggacgacgaggcaatgtccatagatttgtacaagaga
cttgatgaaactaaaaatcaactaggatgtatcgatcagaaaccagcgatacaggaaagg
gattggatgattttaccagacagtgattcggattcgggggattatttaaatacgattaaa
ccatcagttgagaaggaaggttttcctataaaagaaccactatatttaacgtttgaagaa
acatttttcttaatgttcggattgggctgccttcaagttattaactacgacggtaatatg
atgaacattttagaagcatggaaccacttctgtcgtgtccaacacgactttgtacaaaaa
tatgtcgtataccattactttcgaagcaaaggatgggtagttaaaccgggattgaagtat
ggtggtgattttctgctctacaaacaaggaccgccattctaccatgcttcgtatatagtt
atcgtagaagttttaaatgcagataccttgctcaaagacactaaaaaaatggtgcgcaaa
atgacgtggacaaaacttgcaagcttggatagattgtctgaaacagctgcgaaggagata
ttatttgctcaagttctttggccaccagaagtttccaaggatgagatttcttttagtcca
gaatttttgtcagaatttacagtgaacgagttactgtacagaagatggatacccaaacaa
aagcgagaggaaattgatttagaaaacgatattgaattacacgaatga
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