Anguilla rostrata (American eel): 135233219
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Entry
135233219 CDS
T10705
Symbol
skic3
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135233219 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135233219 (skic3)
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
135233219 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_17
TPR_8
TPR_12
TPR_16
TPR_11
TPR_CcmH_CycH
TPR_9
TPR-S
ANAPC3
ARM_TT21_C
Fis1_TPR_C
COG4_N
Motif
Other DBs
NCBI-GeneID:
135233219
NCBI-ProteinID:
XP_064152615
LinkDB
All DBs
Position
10:complement(32335119..32362221)
Genome browser
AA seq
1566 aa
AA seq
DB search
MASKEVKSALKNAREAIKNKEYKEALKHCKAVLKLEKSNYNAWVFIGLAASELEQPDQAQ
SAYRKACDLEPEQLLAWQGLANLFEKSTQTDFKAELPRVYQKLITLYESSDKVKCYEVGK
KLVEIYHTEKNHLQVARLWCRLIQLKEDAEEGVVGRAGLLKLWQEMTQLLADSVEEQDNE
TQQHLINAFEKAMSLMDNIPSEDHKKLSANYITCLSKLPHEEVKMKEACEAMLSLYPTHA
FPLEVLGTHYLRSGVCSEEAGGCFARLLELDADSGLAHIGLGAKALEEGRYEEAVRSLAA
GLKRARSCSVGWLRLAQAQLKLHRYAASAVSCRQGLKVLDGDAGGAESRRRLLRMKAEAL
VRAGGEQNADEALEALAQLDDADNDPDLVSLRGRAYLQKGLVDKALQVSSELPPEAHPGQ
AEVLVLRGLAQLARDELREAEESFLKALELKPSSGECLFLLGRLYWDMGEETRRDKGKAH
IHLMKAAKLDPHLGVTFRYLGHYYRDVARDPGRARGCYKRAFELDASEAEAGAAAVDLSM
ELGDMDSALAILTAVTEEATPGSAKWAWMRRGLYHLKIDQPPHAIDDLQAALRADPQDWV
CWECLGEAYLKRRCFTSALKAFDKARQLNPASIYSLYQMAAIKQVLGKFTEAVPEYMQII
SQEEYVPALKGLGECHLALAQGAMADYLDGRAVDLIQLAVEFLFRALQLRPDLCCLWKLL
GDVCTAAHAVSPGRARVLVPGPLAGMDPADQKHTLDQTQVLKLGERCYGRALKLMSEAPN
LWHDLGLNYYHQARRLVGQEEERGACLDKSLQCIKKAVMLDSTKHSYWNALGVVAMSTGI
ENFALAQHSFIKSLNMEANNVVAWTNLGALYLKTENIELSHEAFKIAQSLEPLYVNCWIG
QALIAEAVGSYDTMDLYRHTTELSTHTEGVKGYAFWVCSTLLDKTNRESELYRYNIVQMN
AVSAAQVALCKYAERIQTDSSAFTMLGYLNEHLNLKNQAVWAYLRAVELLQPAGPSEELS
FALRNYGRALCNTGQWEQAVRIYSSTPQEELYDITGLALAYFRAGLLQDSVSAYEKALAV
ASSEKERAYILTALALLQHRIGNMDAAKTLLFKCSVLKEPIAESLLSLCALGLVRGDATL
ASAALAELLKQGGAAVEERCLLTCALLALQGNYSAVQREAARAVHSNPGNPSLWALLSRL
VPRYYPRKAAGGAVAGNVACHSSMTLGKKALLYSGVNQLARGRHSGEDPRRNALKTIQRA
ALLCPDDPAVWAALMAACHTENTACVLSGSAPRRRGLEGMLMSRVAEKVKAVEAVEKPLG
QALQSWVLQQAVIALKQAGQHSEAEALCTQALSVSPEDPAVFLLLRQVQCEALLPSGAGT
SLPASVLDQLSAAVLANHSSVSAWHWMAEVYRTQGLLVQAVMAYRQSLQLASQQGLFSGK
LSSLLRLALLALGPCMANVPGSEWKDLVLEATTEALKLGPCPVAQLLQALLQFSLKMGAR
ETRRLLERIVYPSGPGYPETVASVARWYLLRHLHAKDDLELMDTLLDQARAVKDKRLLEF
HGRLCP
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaagaagttaagtctgcgttgaaaaacgccagggaagccatcaaaaacaaa
gagtacaaagaagccttaaagcattgcaaggcagtgctgaagctggagaagagtaattac
aatgcctgggttttcattggcttggcggcgagcgagctggagcagccggaccaggcccag
tcagcctacaggaaggcctgcgacctggagcccgaacagctgctggcctggcaggggtta
gcaaatctgtttgaaaagagcacccagacagatttcaaagctgaacttccgagggtctac
cagaaactcataacgctgtatgaaagttcggacaaggtgaaatgttatgaagtgggaaag
aagctggtcgaaatttatcacacagagaagaatcatttgcaggtggcgagattgtggtgt
aggctgattcagctgaaggaggatgcggaggagggggttgtggggagggcggggctgctg
aagctgtggcaggagatgacccagctattggctgacagcgtggaggagcaggataacgag
acccagcagcatttaataaacgcttttgagaaggccatgtccctcatggacaatataccc
tcagaggaccacaagaagctctcagccaattacattacatgcttatcaaaactcccacac
gaggaggtgaagatgaaggaggcctgtgaggccatgctgtccctctaccccacgcacgcc
ttccccctggaggtgctcggcacgcactacctccgctctggcgtctgcagcgaggaggcc
ggcggctgcttcgcgcggctcctggagctggacgcggacagcgggctggcccacatcggc
ctgggggccaaggcgttggaggaggggaggtacgaggaggccgtgaggagcctggccgcg
ggtctgaaacgcgcgcggtcctgttcggtggggtggctcaggctggcccaggcccagctg
aaactgcacagatacgccgccagcgccgtctcctgcagacagggactgaaggtgttggac
ggggacgccggaggggcggagtcgaggaggaggctgctgcggatgaaggcggaggcgttg
gtgagagccgggggagagcagaacgcggacgaggccctggaggcgctcgcgcagctggac
gatgctgataatgaccctgatctggtgtccttaagaggaagggcttatctgcagaagggg
ctcgttgacaaagctcttcaggtgtcctcggagctccccccggaggcccacccgggacag
gcggaggtcctggtcctgaggggactggctcagctcgcgcgggacgagctccgggaggcc
gaggagagcttcctgaaagccctggagctcaagccaagttcgggggagtgcctctttctg
ctgggacggctgtactgggacatgggggaggagacgcgccgggacaagggcaaggctcac
atccaccttatgaaggccgccaagctggacccgcacttgggcgtgacgttccggtacctg
gggcactactacagggacgtggcgcgggacccggggcgggccaggggctgctacaagcgg
gcgtttgagctggacgccagcgaggccgaggccggagccgccgccgtggacctcagcatg
gagctgggagacatggactctgccctggccatcctgactgcggtgacggaggaggccacg
ccgggctcggctaagtgggcctggatgaggcgtggtctgtaccacctgaagatcgaccag
cccccgcatgccatcgatgacttgcaggcagcgctcagggccgacccccaggactgggtg
tgctgggagtgtctgggagaggcctacctgaagaggcggtgcttcacgtccgcgctcaag
gccttcgacaaggcccgccagctcaaccccgcctccatctacagcctgtaccagatggcg
gccatcaagcaggtcctggggaagttcacggaggccgtcccagagtacatgcagatcatc
agccaggaggaatacgtccctgcgctgaaaggtctaggagagtgccatctggccttggcc
caaggggcgatggcagactacctggacggccgagcggtcgacctcattcagctggctgtg
gagttcctcttcagggctctgcagctgcgcccggacctgtgctgcttgtggaagctcctg
ggggacgtgtgcaccgcggcccacgccgtgtctcccggccgggccagggttctggtgccg
ggcccgctggccgggatggacccggctgaccagaagcacaccctggaccagacccaggtc
ctcaagctcggggaaaggtgctacggccgcgcactgaagctcatgtccgaagcccctaat
ctctggcacgacctcggcctcaactactaccaccaggcccggcgcctggttggccaggag
gaggagaggggggcgtgcctggataaatctctgcagtgcattaagaaggctgtgatgctg
gacagcaccaaacacagctactggaacgccctgggcgtggtggccatgagcacaggcatt
gaaaactttgctctcgctcagcactcctttattaagtctttgaacatggaagccaataat
gttgtagcttggacaaacctgggagcactgtatctgaagacggaaaatattgagctctct
cacgaagcattcaagattgcccaatcactggagccgctgtacgtcaattgctggattgga
caggctctgatagcggaagcggtggggagctacgacaccatggatctgtacaggcacacc
acggagctgagcacccacacggagggcgtaaaaggctatgcgttctgggtgtgctccacg
ctgttggataagaccaacagggagtctgagctgtatcggtacaacatcgtccagatgaac
gcggtgtctgctgctcaggtggccttgtgcaagtacgcggagagaatccaaacagattcc
agcgccttcaccatgctggggtacctgaacgagcacctgaacctgaaaaaccaagccgtt
tgggcctacctgagagccgtggagttgctgcagcctgcggggccctcagaagagctgagc
ttcgccctgaggaactacggccgcgccctttgcaacacaggccaatgggagcaggcggtg
cgcatttactcctccacgccacaggaggagctgtatgacatcacagggctggcgctggcc
tactttagagccggactcctgcaggacagcgtgagcgcctatgagaaggctctggccgtg
gcctccagtgagaaagagagagcctacatcctcactgccctggccctgcttcagcacagg
ataggcaacatggacgctgccaaaacgctgctcttcaaatgctcggtgctgaaggagccc
atcgcggagagcctgctgtcgctgtgcgccctgggcctggtgcgcggggacgccacgctg
gccagcgccgccctcgccgagctgctgaagcagggcggggccgccgtggaggagcgctgc
ctgctcacctgcgccctgctggccctgcaggggaactacagcgccgtgcagagagaggcc
gcccgagccgtccacagtaacccgggcaacccctccctctgggcattgctgtcacgactg
gtaccacggtattaccccaggaaggctgctggtggtgcggtagctgggaatgtggcctgt
cactccagcatgactctgggaaagaaggcgctgttgtacagcggagtgaaccagctggcc
cgtggcagacactctggggaggacccccgcaggaacgctctgaagaccatccagagagct
gcgctgctctgcccggatgacccggcggtgtgggccgccctgatggccgcctgtcacaca
gagaacaccgcctgcgtgctctctggctccgcccctcgccgccggggcctggagggcatg
ctcatgagccgtgtggctgagaaagtgaaagctgtagaggctgtggagaagccgctgggt
caggctctgcagagctgggttctgcagcaggctgtgatcgccctcaaacaggctggccag
cactcagaggccgaggccctctgtactcaggcgctgagcgtttctccggaagaccccgcc
gtgttcctgctgctgaggcaggtccagtgcgaggccctcctgccgtcgggcgctggcacc
agcctgcccgcctccgtcctggaccagctcagcgccgccgtcctggccaatcacagctcg
gtgtccgcctggcactggatggcggaggtgtaccggacgcagggcctgctggtccaggct
gtgatggcctacaggcagagcctccagctggcctcccagcagggcctgttcagcgggaag
ctgtccagcctgctgcggctggcgctgctggccctcgggccctgcatggctaacgtcccg
ggcagcgagtggaaggacctggttttggaggccaccacagaggcgctgaagctggggccc
tgtcccgtggcccaactcctgcaggccctgttgcagttctccctaaagatgggggccagg
gaaactcgccgtctgttggaaaggatcgtctacccctccggtcccggttacccggagacg
gtggcgtcggtagcgcgctggtacctccttcgccacctccacgccaaggacgacctggag
ctgatggacaccttgctggaccaggcccgagccgtcaaggacaaaagactcctggagttt
cacgggcgactctgcccttaa
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integrated database retrieval system
