Anguilla rostrata (American eel): 135234151
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Entry
135234151 CDS
T10705
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135234151 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arot03400
]
135234151 (xpc)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
135234151 (xpc)
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Gene cluster
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Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
135234151
NCBI-ProteinID:
XP_064154495
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Position
11:17597887..17607771
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AA seq
862 aa
AA seq
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MVKKKRSADGAAATNTKKLKQTARGNIKRKVKSENGDKAEDVSEEAVLRKVKPKPRNSKP
VGKTGQHTSRYFQDHEEPVTASHDNGIPNHFMERAETLMKVEKEEEEESEDEEWEDVEEL
TEPSCAQELLPVLPSQPVEIEIETLDNARKRQRREKREAEFETYLRRMMNRFNKEVIVDT
HKVHLLCLVANGIFRNQLCSEPDLLAIGLSVVPVHFTAVTPDQADASFLCGLLKWFQATF
TLTPDLPQDQQDSPRAILERSFESLSARNHEEMTHVFLVILRSLQLFCRLVLSLHPIPLK
PVSAKNKAKTSCSPPEKSPSQPKHSPGVKRPGGSSAGGAGPGGKRQRRNTAEKEKPGAGG
RPKNSQRRSVASKVSYKEDSSEGEGSSEEDEFRVSSEAESEDSAETDRRRQGRKGRGKGV
APQRQRSKKETSSEGDEEEEGEEVGRSRTKKGKGTDEWLEVYLERVGRWVCLDVQQTGVG
QYQQCTRQATQPMSYVLAVDGDGYLKDLSSRYDPTWMTSSRKRRVEPEWWEETLCPFRSP
ASQRERQEDQELQAKLLDKPLPTAISDFKNHPLYALKRHLLKYEAIYPPTAAILGYCRGE
AVYSRDCIHTLHSRDTWLKEARTVRLGEEPYKMVKGFSNRARKARQGTEQKDKDDLPLFG
HWQTEPYQPPVAVDGKVPRNEYGNVYLFRPCMLPVGCAHLRLPNLHRVARKLDIDCASAV
TGFDFHCGFSHPVTDGYVVCEEYQEVLQAAWENEQDILQKKEREKREKRALDHWTLLVKG
LLIRERLQRRYGRQRPEQSLSKDEERGLSSGEEDNEGVDTTAVTLANSWPQNRQDDQERE
TKPTTKREKKGQQKHLFPFEKI
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagaagaaaaggtctgcagatggtgcggctgcaacgaatacaaagaagctgaaa
caaaccgcaaggggcaatataaaacgcaaagtaaaatcagagaatggagacaaggcagaa
gatgtttcagaggaagctgttctaagaaaggtcaaacctaaacctcgtaactcaaaacca
gttggtaaaacagggcagcacaccagcagatacttccaggatcatgaggaaccagtcaca
gcaagccatgacaatggcattcccaatcatttcatggagagagcagaaacattgatgaag
gtggaaaaggaagaggaagaagagagtgaggatgaagagtgggaagatgtagaagaactg
acagaaccatcatgcgcacaagagttgttgccagttttgccctctcagcctgtggagatt
gagattgaaacccttgataacgctcgcaagagacagaggagggagaagagggaagcagag
tttgaaacctacctgcggcgtatgatgaaccgttttaacaaagaagtaattgtggacaca
cacaaggtccacctcttgtgtctggtggccaatggaatcttccggaaccagctgtgcagc
gaaccagacctgctggcaatcggcctgtccgtggtgccggttcacttcaccgcggtgacc
ccagaccaggctgatgcctcttttctttgtgggctacttaagtggtttcaggcaacattt
acacttacccctgacctgcctcaggaccagcaggacagtccacgtgccatattggagagg
agctttgaaagcctctctgctcgaaatcatgaggaaatgacccatgtgttcctggttatt
ctgcgatcgctgcagctgttctgtcgcctggtgctgtcacttcatcctattcctctgaag
cctgtttctgccaagaacaaggccaagacctcctgcagccccccggagaagagcccctcg
cagcccaagcactctcctggggtgaagaggccgggggggtccagtgcaggtggggctggg
ccgggggggaagaggcagcgcagaaacacggctgaaaaagagaagcctggggcgggggga
cgacccaaaaactcccagcggcggagcgtggcctctaaagtgtcctacaaagaggacagc
agtgagggggaggggtccagtgaagaggacgaattccgggtctctagcgaagcggagagt
gaagactcagcagagacggaccgcagaaggcagggcagaaaggggaggggcaagggcgtg
gctcctcagagacaacggagcaagaaggaaacaagcagtgagggggacgaggaggaagaa
ggtgaagaggtggggaggagccgaactaagaaaggcaaggggactgatgagtggctggag
gtatatctggagcgggtagggcgttgggtgtgtctggatgtccagcagacaggtgtgggg
cagtaccagcagtgcaccaggcaagccacccagccgatgagctatgtgctggctgtggat
ggggatgggtacctgaaagacctgagctccaggtatgaccccacttggatgacatcatcc
aggaagcgccgggtggagccagagtggtgggaggagactctttgtccgtttcgctcccct
gcttctcagagagagcgccaggaggaccaagagcttcaggcaaagcttctggataaaccg
ctgcccacagcgatctctgactttaagaaccaccccctgtatgccctgaagagacaccta
ctgaagtacgaggctatatatccccctacagcagccatcctggggtactgcaggggcgag
gcagtctactccagggactgtattcacaccctgcactccagagacacttggctgaaggag
gcaaggactgtgcgtctgggggaggagccatacaagatggtgaaggggttctccaatcgg
gcgaggaaagcaaggcagggaacagaacagaaggacaaagatgaccttccgctgtttggt
cactggcaaaccgaaccgtaccagcccccagtagcagtggatggcaaggtgcctcgtaat
gaatatgggaatgtttacctgtttcggccatgcatgttgcctgtgggctgcgctcatttg
cgcctgcccaacctgcacagagtcgcccgcaagctggacatcgactgtgcgtctgctgtc
acaggatttgacttccactgtggcttctcccaccctgtcactgatggctatgttgtatgt
gaagagtatcaggaggtgctgcaagctgcttgggagaatgaacaagacatcctccagaag
aaagagagagagaagcgggagaagagggctctggaccactggactctgctggtaaaaggg
cttctgatccgggaacgactgcagcgtcgctatgggaggcagaggccagagcagtcactg
tccaaggacgaagagcgaggactgtcctccggtgaggaggacaacgagggggtggacacc
actgccgtgaccctggcaaactcatggccccagaaccgacaggacgaccaagagcgggaa
accaaaccaacaaccaaacgggagaaaaagggccagcagaaacatctcttcccctttgag
aaaatatga
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