Anguilla rostrata (American eel): 135251801
Help
Entry
135251801 CDS
T10705
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135251801 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arot03041
]
135251801 (sf3b1)
03036 Chromosome and associated proteins [BR:
arot03036
]
135251801 (sf3b1)
Spliceosome [BR:
arot03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135251801 (sf3b1)
Complex B
135251801 (sf3b1)
Complex C
U2 SnRNP specific factors
135251801 (sf3b1)
Chromosome and associated proteins [BR:
arot03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135251801 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
TOR1L1_N
HEAT_EZ
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
HEAT_ECM29
TPR_IPO5
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
135251801
NCBI-ProteinID:
XP_064185666
LinkDB
All DBs
Position
3:71062617..71081934
Genome browser
AA seq
1399 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKAALLEEGEQGVGLDSTGYYDQEIYGGSDSRFAGYVTSI
AANEQEDDDEEDSSTSLLGQKKAGYHGPVAMLNAVPQSDEQYDPFAEHRPQKIADREDEY
KGRRRVLIISPERLDPFADGGKTPDPKQPARTYMDVMREQHLTKEEKEIRQQLAEKAKAG
ELKVVNGSAASQAAAAAAAAKRKRRWDQTADQTPTSGTPSSGTPKKVSSWDQADASVETP
GHTPGHTPSNSRWDETPGRAKGSETPGATPSTRMWEPTPSHTPAGAATPGRGDTPGHATP
GHGGATSSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWD
ETPASQMGSSTPLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPL
TDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPIGGMTGFHMQTEDRTMKTVNDQ
PSGNLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQI
TDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIE
PLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASAL
GIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQ
KVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDA
EYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFW
QHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNL
GAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWR
LNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKA
IVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVGVLTLFFFA
QGGGVRVGPGVDEDLLRAAGAAEGSQEGHPPSHRQHLRLHRQGHRAPRRAGHAAEQPEGA
GAAEPRVHHGGHRHRGRDLLAVHRAAGADERVPGAGAERAERRAQVPLLPVRVHRRDGQG
LHLRRHAAAGGRAHGQGPGAPADGQRGGAAHVPGRVRLRVRGLAQPPAELRVAQRVRDLA
PRHPGRHGGAGGAPRGHRALPNAAVLPTGPVPPGAEGAGRVLEDLQLHLHRVPGRPDRPL
PPRLQRRKEPLHPLRAGVLPVNTNPPPRCSLSIPQKPRPLFRAHLFYCPPRHWLHLSQLR
PPPVLCPSPPFGRYLFFIV
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacacacgaagacatcgaggctcagatcctggagatccagggg
atgaaggccgccctgctggaggaaggggagcagggcgtgggcctggattccaccggctac
tacgaccaggagatctacggcggcagcgacagccgcttcgccggctacgtcacctccatc
gccgcgaacgagcaagaggatgacgacgaggaagactcctccaccagtctgctggggcag
aagaaagcggggtatcatggtccggtggcgatgcttaacgccgttccgcagtcagatgag
cagtacgaccccttcgccgagcaccggccgcagaagatcgccgaccgcgaggatgagtac
aaaggccggcgccgcgtcctgatcatctctccagagcggcttgaccctttcgcagacggg
ggcaaaacgccggaccctaagcagccggcccggacgtacatggatgtgatgagggagcag
cacctcaccaaagaggagaaagagatccggcagcagctggcggagaaggccaaagcgggg
gagctgaaggtggtgaacggctccgctgcctcccaggcggccgccgccgccgcagccgcc
aagcgcaagcgccgctgggaccagaccgccgaccagacgcccaccagcggcacgcccagc
agcggcacgcccaagaaggtctccagctgggaccaggccgacgccagcgtcgagacccca
ggccacaccccaggccacaccccctccaacagtcgctgggacgagacgcccgggcgggcc
aagggcagcgagacgccgggggccacgcccagcacgcgcatgtgggagccgacgcccagc
cacacgcccgcgggcgccgccaccccgggccgcggggacacgcccggccacgccacgccc
ggccacgggggagccacctccagcgtgcgcaagaaccgctgggacgagacgcccaagacg
gagcgagagaccccggggcacggcagcggctgggctgagacgccccgcacagacaggggg
gacgagtccgtgggggagacccccacccccggggccagcaagcgcaagtcccgctgggac
gagaccccggccagtcagatgggctcgtccacccccctgctcaccccggggaagaccccc
atcggcacccccgccatgaacatggccacgcccaccccaggtcacctgatgagcatgacg
cccgagcagctgcaggcctggcgctgggagcgggaaatcgacgagcggaaccgcccgctg
accgacgaggagctggacgccatgttccccgagggctacaaggtgctgcccccgcccgcg
ggatacgtgcccatccgcacccccgcccgcaagctgaccgccacccccacgcccatcggg
ggcatgaccgggttccacatgcagacggaggaccgcaccatgaagaccgtgaacgaccag
ccgtccgggaacctgcccttcctcaagcccgacgacatccagtacttcgacaagctgctg
gtggaggtggacgagtccactctgagcccagaggaacagaaggagcgcaagatcatgaaa
ctgctgctgaagatcaagaacggcacgccccccatgaggaaggctgctctgcgtcagatc
acagataaagcccgtgagtttggggcaggtcccctcttcaaccagatcctgcccctgctc
atgtcccccacgctggaggaccaggagcgccatctgctggtcaaagtcatcgaccgcatc
ctctacaagctggacgacctggtccgaccctacgtgcacaagatcctggtggtgatcgag
cccttgctgattgatgaggattactacgccagagtggagggcagggagatcatctctaac
ctggccaaggctgccggcctggccaccatgatctccaccatgaggcccgacatcgacaac
atggacgagtacgtgaggaacaccacggcccgcgccttcgccgtggtggcgtccgcgctg
ggcatcccctcgctgctgcccttcctcaaggccgtctgcaagagcaagaagtcctggcag
gcgcgccacaccggcatcaagatcgtgcagcagatcgccatcctcatgggctgcgccatc
ctgccccacctgcgcagcctggtggagatcatcgagcacggtctggtggacgagcagcag
aaggtgcgcaccatcagtgccctggccatcgctgccctggctgaggcggccacgccctac
ggtatcgagtccttcgactccgtgctcaagcccctgtggaagggcatccggcagcacagg
ggaaagggtctggcagccttcctgaaggccattggctacctgatccccctgatggacgct
gaatacgccaattactacaccagggaggtgatgctgatcctcatccgagagttccagtct
cctgatgaggagatgaagaagatcgtgctcaaggtggtgaagcagtgctgtgggaccgat
ggtgtggaggccaactacatcaagaccgagatcctgcccccgttcttcaagcacttctgg
cagcaccggatggctctggaccgtcgtaactacagacagctggtggacaccacggtggag
ctggccaataaggtgggggcggcggagatcatctcgcgcatcgtggacgacctgaaggac
gaggcggagcagtaccgcaagatggtgatggagaccatcgagaagatcatgggcaacctg
ggcgcggccgacatcgaccacaagctggaggagcagctgatcgacggcatcctgtacgcc
ttccaggagcagaccacagaggactctgtgatgctgaacggtttcgggacggtggtcaac
gccctggggaagcgggtcaagccctacctgccgcagatctgcggtaccgtcctgtggcgt
ctcaacaacaagtccgccaaagtgcgccagcaggcggccgacctgatctcgcgcaccgcc
gtggtgatgaagacctgccaggaggagaagctgatggggcatttgggtgtggtgttgtat
gagtacctgggagaggagtaccctgaagttctggggagcatccttggagccctgaaggcc
atcgtcaacgtcatcggcatgcacaagatgaccccgcccatcaaggacctgctgccgcgt
ctgacgcccatcctgaagaacaggcacgagaaggtgcaggagaactgcatcgacctggtg
ggcaggatcgccgacaggggggcggagtacgtgggggtgttaactctgttttttttcgcg
caggggggcggagtacgtgtcggcccgggagtggatgaggatctgcttcgagctgctgga
gctgctgaaggctcacaagaaggccatccgccgagccaccgtcaacaccttcggctacat
cgccaaggccatcgggccccacgacgtgctggccacgctgctgaacaacctgaaggtgca
ggagcggcagaaccgcgtgtgcaccacggtggccatcgccatcgtggccgagacctgctc
gccgttcaccgtgctgccggcgctgatgaacgagtaccgggtgccggagctgaacgtgca
gaacggcgtgctcaagtccctctccttcctgttcgagtacatcggcgagatgggcaagga
ctacatctacgccgtcacgccgctgctggaggacgcgctcatggacagggacctggtgca
ccggcagacggccagcgcggtggtgcagcacatgtccctgggcgtgtacggcttcgggtg
cgaggactcgctcaaccacctgctgaactacgtgtggcccaacgtgttcgagacctcgcc
ccacgtcatccaggccgtcatgggggcgctggaggggctccgcgtggccatcgggccctg
ccgaatgctgcagtactgcctacagggcctgttccacccggcgcggaaggtgcgggacgt
gtactggaagatctacaactccatctacatcgggtcccaggacgccctgatcgcccacta
cccccacgtctacaacgacgaaaagaaccccttcatccgctacgagctggagtacttcct
gtgaacacaaacccccctccccgctgttccctttccattccacagaagccccgcccactc
ttccgcgcacacttattttactgtccgcctcgtcattggctgcacctttctcagctccgc
cccccccccgttctctgtccctcccccccttttggacgttacttgttttttatcgtttag
DBGET
integrated database retrieval system
