Anguilla rostrata (American eel): 135255775
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Entry
135255775 CDS
T10705
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135255775 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arot03019
]
135255775 (cnot1)
Messenger RNA biogenesis [BR:
arot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135255775 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135255775 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
135255775
NCBI-ProteinID:
XP_064193438
LinkDB
All DBs
Position
5:complement(58647268..58682313)
Genome browser
AA seq
2416 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLCYAIDNPLHYQKSLKPSPHLFTQLSKVLK
LSKVQEVIFGLALLNSSSVDLRGFAGQFVKQKLPDLLRSYVDSDLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGACGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGLAKNMMESSLAEFMQEVGYGFCASLDECRNIIRQYGVREVTASQVARVLGMMART
HSGLSDGIPLQSISAPGSGIWSDGKDKSEGSQTHTWNVEVLIDIVKEVNPNLNFKEVTYE
LDHPGFVIRDSKGLQIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEMFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPEKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQVSVSPLQIDP
LTAMGTLTLGGSATSHTQSMPGFPTPLASAFSNPQSPAKVFPTLSNPTPSTPFGGLGSLS
SQLPGPLGSGSLSGIGSGLGMPAVSSDPFVTRKMSTPGLNPTTFQQTDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNVKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGTKMYYFGIAALDR
FKNRLKDYPQYCQHLASIPHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLAL
AQAQSQAPQKAPLPGQVSTMVTTSTTTTVAKTTTITRPTTVSFKKDVPVSIGNAREVGPS
INTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPW
VSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDR
SLLKNLGHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRS
MIFRPQNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKEKL
KSLDEQLSAPKKEAKPPEEMLPIVPPGDCLPFATAPPTPATTTACTATGPPTPQFSYHDI
NVYALAGLAPHININVNIPLLQAHPQLKQCVRQSIERAVQELVHPVVDRSIKIAMTTCEQ
IVRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKSSFAAALRAPTP
QQREMMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCD
PVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQ
AWAADDVAQIYDKCMGELEQHLHAIPPALAMNPQTQALRSLLESVALARNSRDGIAALGL
LQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEY
KYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHITE
ADLFHTIETLMRTSTHSRANAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASE
YDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRL
CTEMCVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKIN
LLNKVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCN
TFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRN
VELNKHMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMR
LPDPFTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQ
VGGTILGPWKHLQQSDTSIDQVSNEPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMS
TITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAI
QEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHDFVHCAPEIEKLFQSVAQCC
MGQKQAQQVMEGTSAS
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgattcgctctcgctggctttgtctcaaatcagctacctggttgacaattta
actaagaaaaattacagagccagccagcaggaaatacaacatattgtgaatcgacacggc
cccgaggcagacaggcatttgttacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagcggcaaagactttcatcagacacagtttctgatccaggagtgcgcgtcg
ctgatcaccaagccaaactttatctcgacgctctgctacgccatcgacaatcctttacac
tatcagaagagtttgaagccgtcaccccatttgtttactcagttgagtaaagtgctgaaa
ttgagcaaggtccaggaggtgatttttggccttgccctgctgaactcctccagcgtagac
ctgagagggtttgccggccagtttgtgaaacagaagcttccggacctcctgcgctcttac
gtggactcggacctcggggggaaccaggaaggtggcttccaagatattgccatagaggtc
ctgcacctgctcctctcccacctcctctttgggcagaagggagcttgtggggttggacag
gaacagatcgacgcgttcctcaagaccctgtgcagagatttcccgcaagagcgctgtccc
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctgatggacaggatcctg
ccagactctggggggttagccaagaacatgatggagagctcgctcgctgagttcatgcag
gaagtgggctacggcttctgtgcaagtctcgacgagtgccgtaatataatccggcagtat
ggcgtgcgggaggtcactgccagtcaggtggcgcgggtgctgggcatgatggcgcgcacc
cattcgggcctgtccgacgggattcccctgcagtccatctccgctccgggcagtgggatc
tggagcgacgggaaggataagagcgaaggctcccagacccacacctggaatgtggaagtt
ctgattgacattgtcaaggaagtcaaccccaatctgaacttcaaagaggtgacctacgag
ctggaccacccggggttcgtcatccgcgacagcaaagggctgcagatcgtggtgtacggc
atccagaggggcctgggcatggaggtgttccccgtcgacctcatctacaggccctggaag
cacgccgagggacagttgtcgttcatccagcattccctgatgagcccggagatgttctgc
tttgcggactacccctgccacaccgtcgccatcgacatcctgaaggctccccccgaagac
gacaaccgggaaatcgctacctggaagagcctggacctggtggagagtctgctccgcctc
tcggaggtggggcagtacgagcaggtgaagcagctcttcagcttccccatcaagcactgc
ccggacatgctggtgctggcgctgctgcagatcagcacctcctggcacaccctgcgccac
gagctcatctccaccctcatgcccatcttcctgggcaaccaccccaactctgccatcatc
ctgcactacgcatggcacggacagggacagtctccttccatccggcagctgatcatgcac
tcgatggcggagtggtacatgaggggggaacagtacgaccaggccaagctctcccgcatc
ctggatgtggctcaggacttgaagtctctatctatgctgctaaacggcactccattcgcc
ttcgttattgaccttgctgcacttgcgtctcgacgtgaatacctcaaacttgacaagtgg
ctcactgacaagatcagagagcacggggagcccttcatccaggcctgtgtgaccttcctg
aagaggcgctgtccctccatcatggggggcttggccccggagaaggaccagcccaaaagc
gcccagcttcccccggagacgctggctaccatgctggcgtgtctgcagtcctgcgcgggg
agtgtctctcaggagctgtccgagaccatcctgaccatggtggcgaactgcagcaacgtg
atgaacaaggcgcggcagccccctccgggcgtgatgcccaagggccgcgcccccagcacc
agcagcctcgacgccatttcccccgtccaggtatcggtgtcccctctgcagatcgacccc
ctgacagccatgggcaccctgacgctgggcggctcggccacctcccacacacagagcatg
cccggcttccccacgcccctggcctccgccttcagcaacccccagtctccggccaaggtg
ttccccaccctgtccaaccccaccccctccaccccgttcggagggctggggagcctgtcc
tcccagctgccaggtccgttgggcagcggcagcttgtccggcatcgggtcgggtctgggg
atgccggccgtgagcagcgaccccttcgtcacgaggaagatgagcaccccgggcttgaac
cccaccaccttccagcagactgacctttctcaggtgtggcctgaggcaaaccagcacttt
agcaaggagatcgacgacgaggccaacagctacttccagcgcatctacaaccacccgcca
caccccaccatgtctgtcgacgaggtgctggagatgctccagcggttcaaggactccaac
gtgaagcgggagcgcgaggtgttcaactgcatgctgcgcaacctgttcgaggagtaccgc
ttcttcccccagtacccggacaaggagctgcacatcaccgcctgcctgttcggcggcatc
atcgagaagggcctggtcacgtacatggcgctaggcctggccctgcgctacgttctggag
gccctgaggaagccttttggcaccaaaatgtactactttggcatcgctgcactagatagg
tttaagaatagactgaaggactatccccagtactgtcagcacttggcttccattccacac
ttcctgcagttccctcaccatttacaggagtgtgtgcagtatatcgagtacggccagcag
tcacgagaccccccagtgaagatgcagggatccatcaccaccccgggcagcctggccctc
gcccaggcccagtcgcaggcgccccaaaaagcccccctcccgggacaggtcagcaccatg
gtaaccacatccaccacaaccactgttgccaaaaccactaccattacccgccccaccacc
gtcagcttcaagaaggacgttccagtgagtatcggtaacgccagggaagtcgggccctct
attaatacgacaaacatcgacacccttttggtggcgacagaccaaactgagaggattgtt
gagcctccagagaacgtccaagagaagatagcgttcattttcaacaatctgtctcaatcc
aatatgacccagaaggtggaggagctgaaggagactgtgaaggaggagtttatgccctgg
gtctctcagtacctggtcatgaagcgggtcagcatcgaaccaaacttccacagcctctac
tccaacttcctggacacgctgaagaaccccgagttcgtcaaaatggtcctgaatgagacc
tacagaaatatcaaggttctgctgacatctgacaaggctgcggctaacttctctgaccga
tctctgctgaagaacctgggccactggctcggaatgatcactctggctaaaaacaagccc
atactgtacacggacctggaggtgaagtctctgctgctggaggcttatgtcaaggggcag
caagagctgctctatgtcgtccccttcgttgccaaagtcttggaatccagtctgaggagc
atgatattcagaccccagaacccttggactatggccattatgaatgtactggcagagctg
catcaggaacatgatctaaagctcaatctgaagtttgagatcgaggtgctgtgcaagaac
ctgtcgctggacatcaatgacctgaagcccgggaacctgctgaaggacaaagagaagctg
aagagcctggacgagcagctgtccgcaccaaagaaagaggccaagccccccgaggagatg
ctgcccatcgtgcccccaggcgactgtcttccatttgctactgcgccccctacccccgcc
accaccaccgcctgcacagccaccggccctcccaccccccagttcagttaccatgacatc
aatgtctacgccctggctggcctggccccccacatcaacatcaacgtcaacatccccctg
ctgcaggcgcacccccagctgaagcagtgcgtgaggcagtccatcgagcgggccgtgcag
gagctggtgcaccccgtggtggaccgctccatcaagatcgccatgacgacctgcgagcag
atcgtgcgcaaggactttgcgctggactcggaggagtcgcgcatgcgcgtggcggcgcat
cacatgatgcgcaacctgaccgccggcatggccatgatcacctgccgcgagccgctgctc
atgagcatcgccaccaacctgaagagcagcttcgccgccgccctgcgggcccccaccccc
cagcagagggagatgatggaggaggctgccgcccgtatcgcccaggacaactgtgagctg
gcctgctgcttcatccagaagactgctgtggagaaggctggccccgagatggacaagaga
ctggccaccgagtttgagctgaggaagcacgctcggcaggaaggccggcgctactgtgac
ccggtggtgctgacgtaccaggccgagcgcatgccggagcagatcaggctaaaggtcggt
ggtgtggaccctaaacagctggctgtttatgaggaatttgctcgcaacgttcccggtttt
ttgcccagcaacgacctgtcccagcccaccgggttcctcgctcagcccatgaagcaacag
gcctgggcggcggacgacgtggcgcagatctacgacaagtgcatgggggagctggagcag
cacctgcacgccatcccccccgccctggccatgaacccccagacccaggcgctgcgcagc
ctgctggagtccgtggcgctggcccgaaactcccgcgacggcatcgccgcgctcggcctg
ctccagaaggctgtggagggcctgctggatgccaccagcggtgcggacgctgacctgctg
ctgcgctatcgagagtgccacctgctggtgctcaaggccctgcaggacggccgggcctac
gggcctcagtggtgcaacaagcagatcacgcggtgcctaatcgagtgccgtgatgagtac
aagtacaacgtagaggccgtggagctgctgatccggaaccacctggtgaacatgcagcag
tatgacctgcacctggcacagtcgatggagaacgggctgcactacatggcggtggccttc
gccatgcagctggtgaagctgctgctggtggacgagcgcagcgtcagccacatcacggag
gccgacctgttccacaccatcgagacgctcatgaggaccagcacccactccagagccaac
gcccccgaggggcttccccagctgatggaggtggtgcgctccaactacgaggccatgatc
gaccgggcccacggggggcccaacttcatgatgcattctgggatctcccaggcgtcggag
tacgacgacccgccggggctgagggagaaggccgagtacctgctgagggagtgggtcaac
ctgtaccactccgccgccgcggggcgggacagcaccaaggccttctccgccttcgtggga
cagatgcaccagcaggggatcctgaagaccgatgacctcatcacgcgcttcttccgcctg
tgcacggagatgtgcgtggagatcagctaccgggcgcaggccgagcagcagcacaacccg
gccgccagcgccgccatcatccgcgccaaatgctaccacaacctggacgccttcgtgcgg
ctcatcgccctgctggtcaagcactccggcgaggccaccaacaccgtcaccaagatcaac
ctgctcaacaaggtcctgggcatcgtggtgggcgttctgatccaggaccacgacgtgcgg
cagacggagttccagcagctgccgtaccaccgcatcttcatcatgctgctgctggagctc
aacgcccccgagcacgtgctggagaccatcaacttccagaccctcactgccttctgcaac
acgttccacatcctgcggcccaccaaagcgccggggttcgtgtacgcctggctggagctg
atctctcaccgcatcttcatcgcccggatgctggcgcacacgccgcagcagaagggctgg
cccatgtacgcccagctgctgatcgacctcttcaagtacctggcccccttcctgaggaac
gtagagctcaacaagcacatgcagatcctctacaagggcacgctgcgtgtgctgctggtg
ctgctgcacgacttcccggagttcctgtgcgactaccactacggcttctgcgacgtcatc
ccgcccaactgcatccagctgcgcaacctgatcctcagcgccttcccccgcaacatgagg
ctccccgaccccttcacccccaacctgaaggtggacatgctgagcgaaatcaacatcgcc
ccccgcatcctcaccaacttcaccggggtgatgccgtctcagtttaagaaggatctggac
tcttacctaaagactcgttcccctgtcacctttctgtccgagctgcgcagcaacctgcag
gtagggggcaccattctgggtccctggaaacatttgcagcaaagtgacacatctatagac
caggtgtcgaacgagccggggaacaggtacaacatccagctgatcaacgcgctggtgctg
tacgtgggcactcaggccatcgcgcacatccacaacaagggcagcaccccctccatgagc
accatcacccactcggcccacatggacatcttccagaacctggccgtggacctggacaca
gaggggcggtacctgttccttaatgcgatagccaatcagctgcggtatccaaacagccac
acccactacttcagctgcactatgctttacctgtttgccgaagccaatacagaagccatt
caagagcagatcactcgggtgctgctggagaggctgatcgtgaacaggccacacccctgg
ggtctcctcatcaccttcatcgagctcatcaagaaccccgccttcaagttctggaaccac
gactttgtgcactgcgcaccggagatagagaagttgttccagtcggtggctcagtgctgt
atggggcagaaacaagcacagcaggtgatggagggcaccagcgccagctaa
DBGET
integrated database retrieval system
