Apteryx rowi (Okarito brown kiwi): 112961757
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Entry
112961757 CDS
T07573
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04010
MAPK signaling pathway
arow04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112961757 (CACNA1A)
04020 Calcium signaling pathway
112961757 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arow04040
]
112961757 (CACNA1A)
Ion channels [BR:
arow04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112961757 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4034
Motif
Other DBs
NCBI-GeneID:
112961757
NCBI-ProteinID:
XP_025913036
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All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MVARLVVDIRPDWDLAALGGHDEIKVEVPCGTDEPARICPNGTKCKKYWEGPNYGITQFD
NILFAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGE
FAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDDAEGEQRHPFDALRR
ATIKRSKTDLLNPEDADEQLADISSVGSPFARASLKSAKLENSTFFHKRERRMRFYIRRM
VKTQAFYWTVLSLVALNTLCVAIVHYDQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLGT
RPYFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASLRNL
VVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMTVFQ
ILTGEDWNAVMYDGIKSQGGVQGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQEL
TKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSISVKEQQKNQKSSKSVWEQRTSELR
KQNLLASREALYNELDPEERWKVSYARHLRPDMKTHLDRPLVVDPQENRNNNTNKTRPGE
APAEARGSQPRADDGFRKPENQGPGGPPGPTLSTTRPIQQDLGRPEPQVAEDIDNMKNNK
LVTTEPPVPVAAGLRPPSPAPVGNHTECPAGQPPSAAAAAANRRAPNNPAGPPKTPENSL
IVTNPGPHNNPAKAAKKPEHTAVDIPPPFPPPVPNTVIQVNKNANPDPLPKKEEEKKEEE
ADDQEENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIALAAEDP
VQPNAPRNNVSVTLGRRHGGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVN
SLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKA
QKREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFY
VVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQN
RQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYDASDTYETVLKMFNNVFTSLFSL
ECLLKIMAFGVLNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKL
LRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggtggcaaggcttgtggtggacatacggccagattgggacttggcagctcttggtggc
catgacgagatcaaggtggaagttccttgcgggacggacgagccggcccggatctgcccc
aacggcaccaagtgcaagaagtactgggaagggccgaattacgggatcacgcagttcgac
aacatcctcttcgccgtgctgactgtcttccagtgcatcaccatggaagggtggaccgac
ctcctttattatagcaacgatgcctcagggaatacttggaactggctgtacttcatcccc
ctcatcatcatcggctccttttttatgctgaacctagtgctgggggtgctgtccggggag
ttcgccaaagagagggagcgggtggagaaccgccgggccttcctgaagctgcggcggcag
cagcagatcgagcgcgagctcaacggctacatggagtggatctccaaagcggaagaagtg
atcctggcagaggacgacgccgagggagagcagagacaccccttcgatgctctgcggcgc
gccaccatcaagaggagcaagacggacctgctgaaccctgaggacgccgacgagcagctg
gccgacatctcctccgtgggttcccccttcgcccgcgccagcctcaaaagtgccaagctg
gaaaactccacttttttccacaaacgggagaggagaatgcgtttctatatccgccgaatg
gtcaaaactcaggccttctactggaccgtcctcagtctggtagctctcaacaccttgtgt
gttgctatagtacactacgaccagccagattggctatccgacttcctctactatgcagaa
ttcattttcttgggactctttatgtccgaaatgtttataaaaatgtacgggctggggacg
cggccttactttcactcgtccttcaattgcttcgactgtgccgttatcatcggaagcatc
ttcgaggtgatctgggctgtggtgaagccrggaacatcctttgggatcagcgtgttacga
gctctcaggttactgcgtattttcaaagtcaccaagtactgggcttccctgaggaacctg
gtggtctccctcctgaactccatgaagtccatcatcagcctcttgttcctcctcttcctc
ttcatcgtcgtctttgcccttttggggatgcagctcttcgggggacagttcaattttgac
gacgggacccctcccaccaacttcgacaccttcccagcagcaataatgacggtctttcag
atcctgacgggcgaagactggaacgcggtgatgtacgacggcatcaaatctcagggcggc
gtccagggcgggatggtcttctccgtctacttcatcgtcctcaccctcttcggcaactac
accctcctgaacgtcttcttggccatcgcggtggacaacctggccaaygcgcaggagctc
accaaggacgagcaggaggaggaggaagcygccaaccagaagctggcgctgcagaaggcc
aaggaggtggccgaagtgagcccgctctcggcggccaacatgtccatctccgtgaaagag
cagcagaagaaccagaagtcctccaagtcggtgtgggagcagcggacgagcgagctgcgc
aagcagaacctgctggcgagccgcgaggcgctctacaacgagctggaccccgaggagcgc
tggaaggtctcctacgcccgccacctgcgccccgacatgaagacccacctggaccgcccg
ctggtggtggacccccaggagaaccgcaacaacaacaccaacaagacgcggcccggcgag
gcgccggcggaggcgcggggctcccagccgcgggccgacgacggcttccgcaagccggag
aaccaaggtcccggggggccgcccggtcccaccttgtccaccacccgccccatccagcag
gacctgggtcgtcccgagccccaggtggccgaggacatcgacaacatgaagaacaacaag
ctggtcaccaccgagccccccgtgccggtcgccgccgggctccggccacccagcccggcg
cccgtgggcaaccacaccgagtgcccrgcgggtcaacccccgtccgccgccgccgccgct
gccaaccgccgggcgcccaacaaccccgcgggcccccccaagacccccgagaacagcctc
atcgtcaccaaccccggcccccacaacaacccggccaaggcggccaagaagcccgagcac
acggccgtggacatcccgccgcccttcccgccgcccgtccccaacaccgtcatccaagtg
aacaagaacgccaaccccgacccgctgcccaagaaagaggaggagaagaaagaggaagaa
gctgacgatcaagaggaaaacgggcccaagcccatggtgccctacagctccatgttcatc
ctctccaccaccaacccctttcgccgcctgtgccactacatcgtcaacctgcgctacttc
gagatgtgcatcctcatggtcatcgccatgagcagcatygccctggccgccgaggacccc
gtgcagcccaacgccccccgcaacaacgtgagcgtcacgctcgggcggcggcacggcggc
agcagcaaagggaaggacatcaacaccatcaagtccctccgcgtcctccgcgtcctccgg
cccctgaagaccatcaagaggttgccaaagctcaaggccgtcttcgactgtgtcgtgaac
tccctcaagaacgtcctcaacatcctcatcgtctacatgctcttcatgttcatcttcgcc
gtggtggccgtccagctcttcaagggcaagttcttctactgcaccgacgagtccaaggag
ttcgagaaggactgtaggggggaatatctggtctacgagaaggacaacgaggtgaaggcg
cagaagcgggagtggaagaagtacgagtttcactacgacaacgtgctctgggctctgctc
accctcttcaccgtgtccacgggagaaggctggccgcaggtcctcaagcactcggtggac
gccacctacgagaaccagggccccagcccgggctaccgcatggagatgtccatcttctac
gtggtctacttcgtggtcttccccttcttcttcgtcaacatcttcgtggccttgatcatc
atcaccttccargagcagggggacaagatgatggaggagtacagcctggagaagaacgag
agggcctgcatcgacttcgccatcagcgcgaagcccctgacgcgccacatgccccagaac
cgccagagcttccagtaccgcatgtggcagttcgtggtgtccccccccttcgagtacacc
atcatggccatgatcgccctcaacaccatcgtcctcatgatgaagttctacgatgcctcg
gacacctacgagaccgtgctgaagatgttcaacaacgtcttcacctccctcttctccctt
gagtgtctcctcaagatcatggcytttggcgtgctgaattatttccgcgatgcctggaat
atctttgattttgtcacagttctggggagcatcacggacatcctagtgaccgagtttggg
aacaacttcatcaacctcagcttcctgcgcctcttccgggccgcccggctcatcaagctg
ctccgccagggctacaccatccgcatcctgctctggaccttcgtccagtccttcaaggcc
ttgccctacgtgtgcctgctcatcgccatgctcttcttcatctacgccatcatcgggatg
cag
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