Arthrobacter sp. Rue61a: ARUE_c07880
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Entry
ARUE_c07880 CDS
T02215
Symbol
recQ1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARUE_c07880 (recQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arr03019
]
ARUE_c07880 (recQ1)
03400 DNA repair and recombination proteins [BR:
arr03400
]
ARUE_c07880 (recQ1)
Enzymes [BR:
arr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ARUE_c07880 (recQ1)
Messenger RNA biogenesis [BR:
arr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ARUE_c07880 (recQ1)
DNA repair and recombination proteins [BR:
arr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ARUE_c07880 (recQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
MFS18
ARM_ARMC5
DUF8096
Motif
Other DBs
NCBI-ProteinID:
AFR27719
LinkDB
All DBs
Position
830504..832669
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AA seq
721 aa
AA seq
DB search
MANNSPNAAVSVQSPTHQQALACLRELVGHPEARFHNGQYEAIEALVDAGRRALVVQRTG
WGKSAVYFVASLLLRRRGSGPTLIVSPLLALMRDQVAAAARAGVRAVAINSANALEWDTV
LAQLAADEVDVLLVSPERLTNPSFRENQLPELIRRTGLLVIDEAHCISDWGHDFRPDYRR
IADLIAQLPESVPVLATTATANSRVVHDIEEQLGAGVLTIRGALGRESLRLGVLTLPDSR
DRLGWLLTHLADMPGSGIIYTLTVSAAEDTARLLAEAGHNVLSYTGRTDPADRERAEQLL
KDNQVKALVATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRGAANADVLLLPGS
EDREIWQYFATASMPSAEKAEAVLGVLGEAGSALSTVALEARVDLRRTPLELLLKVLAVD
GAVERVGGGWRSTGQPWNYDAERYARIAEARVDEQDSMVIYQDTAGCRMEYITSVLDDET
AASCGRCDNCAGRWFPVDVAASAADAAGQTLRRAGIAVEPRLQWPSGMDRLGVAVKGKIK
PDESVSEGRILARLTDLGWGGALRELFAAGAPDHAVDPAMLQACVQVLREWSGAEGGTPW
SGVGRPAAVVSIPSRSKPQLVESLAQGIAGIGRMPYLGQLQPQYGGPTGARGGNSAYRLA
GVWDRLVVGPELAQALAGTGGQPVLLVDDLIDSRWTMTVSARALRQAGVSAVLPLALAQA
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaactccccaaacgctgccgtttccgtgcaatcacctacacatcagcaggcg
ctggcgtgccttcgtgagttggtgggccaccccgaagcccggttccataacgggcagtat
gaagccatcgaggcgttggtggacgcgggccgccgagcgttggtagtacagcggacagga
tggggaaagtcagcggtttacttcgtggcgtcattgctgttgcgtcggcgtggctccggt
ccaacgctgattgtgtcgccgttgcttgcgctcatgcgtgaccaggtagccgcagctgcc
cgggcgggcgtgcgggccgtcgccataaactccgccaatgccttggagtgggacacggtc
cttgcccagctggccgcggacgaggttgatgtccttctggtctccccggagcggctcacc
aacccctctttcagggagaatcagcttccggagctcattcgccgaaccgggctactggtg
attgacgaggcccactgtatatcggactggggccacgacttccgccctgactaccgccgc
atcgcggacctcattgcacagttgcctgagtctgttccggttttggcaaccacagccacc
gccaattccagggtggttcacgacatcgaagaacaacttggcgccggagtgttgaccata
cgaggcgcactgggtcgcgaatcccttcggctcggtgtcctgacgctgcccgattccagg
gatcggctggggtggctgctgacgcaccttgcggacatgcccggcagcggcattatttac
acgctcacggtctcggcggccgaggacaccgcacggcttcttgcggaggccgggcacaac
gttttgtcctacacgggaagaacggacccggcggaccgggagcgtgccgaacaactcctg
aaggacaaccaagtgaaggccctcgtggccacttccgccctgggaatgggattcgacaag
ccggacctgggcttcgtgatccacctcggcgctccgtcgtcaccggttgcctactaccag
caggttggccgtgcgggacgtggagcagccaacgccgacgtcctgctcctgccgggctcc
gaagaccgcgaaatctggcagtacttcgccacagcatccatgccatcggcagagaaagcc
gaggctgtgctgggcgtgctgggggaggcaggctcagccttgtccaccgtcgcgctggaa
gccagggtggatcttcgccgtacgcctttggaactcctcctcaaagtcctggcagtcgat
ggagcagtagaacgcgttgggggcggttggcgatcaaccggccagccgtggaactatgac
gccgaacgctacgcacgcatcgccgaagcccgcgtggatgagcaggattccatggtgatc
taccaggacacggctggctgccgcatggaatacatcacctcggtcctggatgacgaaact
gcagcttcctgcggacgctgcgacaattgcgccggccgctggttcccggtggacgtggcg
gcgtcggcagccgacgccgcgggacaaaccctccggcgtgccggcatagccgtggaaccc
cggctacagtggcccagcggcatggaccgcctcggtgttgcagtcaagggaaagatcaag
cccgacgagagcgtttcagaaggacgcatcctggccaggcttactgacctgggctggggc
ggagctttgcgggagctgttcgctgccggggctccggaccacgccgtggatcctgccatg
ctgcaggcctgcgtccaagtactgcgcgagtggtctggggccgaaggcggaaccccgtgg
agcggcgtcggacgacctgcggcggttgtcagcatcccgtcgcgcagcaagccacagtta
gtggaatccctggcgcaggggattgccgggatagggcggatgccgtacctcgggcagctg
cagccccagtacggaggaccaacaggagcccgcggcggcaacagcgcatacaggctggcc
ggtgtctgggacaggctcgttgtgggccccgagcttgcccaggccttggcgggcacgggc
ggacagcccgtgttgctggtggacgacctcatagacagccgctggaccatgaccgtatcc
gcccgtgccttgcgacaagccggcgtgagcgccgttctgccactggcgctggcccaagcc
ggataa
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