Arthrobacter sp. ATA002: OL239_04720
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Entry
OL239_04720 CDS
T10700
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
arta Arthrobacter sp. ATA002
Pathway
arta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OL239_04720 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arta03021
]
OL239_04720 (rpoB)
03400 DNA repair and recombination proteins [BR:
arta03400
]
OL239_04720 (rpoB)
Enzymes [BR:
arta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OL239_04720 (rpoB)
Transcription machinery [BR:
arta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OL239_04720 (rpoB)
DNA repair and recombination proteins [BR:
arta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OL239_04720 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WAP52548
LinkDB
All DBs
Position
926157..929657
Genome browser
AA seq
1166 aa
AA seq
DB search
MVASSTSNNATANIPENIAPRISFAKIHEPLDVPNLLALQTDSFDWLVGNERWKARVEQA
KQTGEQGIATTSGLADIFEEISPIEDFQGTMSLSFTEPEFADPKYTMAECKDRDATYSAP
LYVKAEFMNNNTGEIKQQTVFMGDFPLMTDKGTFVINGTERVVVSQLVRSPGAYFERTAD
KTSDKDIYTAKIIPSRGAWFELEIDKRDQVGVRLDRKRKQSVTVLLKALGWTEGQILETF
GEYDSIRATLEKDPTETREDALLDIYRKLRPGEPPTVEAAQTLLDNLYFNPKRYDLAKVG
RYKINRKLGIDKPLTDSDASVLNNDDIVAMIKFLVALHAGEKTVPGKRNGEDVDIRVEVD
DIDHFGNRRIRAVGELIENQIRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIK
EFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIET
PEGPNIGLIGSLASYARINAFGFIETPYRKVINGVVTDQVDYLTADDEVERTIAQANAPL
REDQHFAEDLVLVRARGGSGEPVLVEPEGVEYMDVSPRQMVSVATALIPFLEHDDANRAL
MGANMQRQAVPLLRSERPVVGTGMEKYAAVDAGDSVTAVKPGVVTEVSAELVTVMNDDGT
ESNYPIMKFARSNQGNAYNQRVLVAEGARVEVNSIIADGPSTDQGELALGKNLLVAFMSW
EGHNYEDAIILSQRMVSDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEEVLSQLDE
RGIIHIGAEVEAGDILVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGESGT
VIGVRIFDRDNDDELPPGVNQLVRVYVAHKRKITDGDKLAGRHGNKGVISKILPVEDMPF
MEDGTPVDIVLNPLGVPGRMNVGQVLEIHLGWAAKQGWKIDGNPEWVQNLPELPRETGPT
TVATPVFDGASEDEITGLLDSTNVTRDGNRLIGASGKARMFDGRSGQPFPEPISVGYMYI
LKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELLT
IKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSTEGNTIEMRDS
DEEVFRAAEELGIDLSRAEPSSVEEV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcctcgagcacctctaataatgcaaccgctaacatcccggagaacatcgctccc
cggatttcattcgcaaagattcacgaaccgcttgacgttcccaatcttcttgccctgcag
accgacagctttgactggctggtcggcaacgagcgctggaaggcgcgcgtggaacaggcc
aagcagaccggggaacagggcattgccaccacctccggactggctgacatcttcgaggaa
atctccccgattgaagacttccagggcaccatgtccctgagcttcaccgagccggaattt
gccgacccgaagtacaccatggccgagtgcaaggaccgggacgcaacgtactcggctccg
ctgtacgttaaagccgaattcatgaacaacaacacgggcgaaatcaagcagcagaccgtg
ttcatgggcgacttcccgctgatgacagacaagggaacgttcgtcatcaacggcaccgag
cgtgtcgttgtttcccagctggtccgttcgccgggtgcctacttcgagcgcaccgcggac
aagaccagcgacaaggacatctacaccgcgaagatcattccttcccgcggtgcctggttc
gaactcgaaattgacaagcgcgaccaggtcggcgtccgcctcgaccgcaagcgcaagcag
tccgtcaccgtcctgctcaaggccctgggctggaccgaaggccagatcctcgagaccttc
ggcgaatacgactccatccgcgccacgctggagaaggaccccacggaaacccgtgaggat
gccctgctggacatctaccgcaagctccgtccgggcgagccgcccacggtcgaggctgcc
cagaccctgctggacaacctgtacttcaacccgaagcgctacgacctggccaaggttggc
cgctacaagatcaaccgcaagctcggcatcgacaagccgctgacggactccgacgcttcg
gtcctgaacaacgatgacatcgttgccatgatcaagttcctggttgccctgcacgccggc
gagaagaccgtccctggcaagcgcaacggcgaggacgtcgacatccgcgtcgaggttgac
gacatcgaccacttcggcaaccgccgcatccgcgccgtcggcgaactcatcgagaaccag
atccgcacgggcctgtcccgtatggagcgcgttgtccgtgagcgcatgaccacccaggac
gtcgaagcgatcacgccgcagacgctgatcaacatccgtccggtcgtggccgcgatcaag
gagttcttcggaacctcccagctttcgcagttcatggaccagaacaacccgctcgccgga
ctgacgcacaagcgccgcctgtccgcgctgggcccgggtggtctgtcccgtgaccgcgca
ggcatggaagtccgggacgtccacccctcgcactacggccgcatgtgccccatcgaaacc
cctgaaggcccgaacattggcctgatcggttcgctggcctcctacgcccggatcaacgcc
ttcggtttcattgaaaccccgtaccgcaaggtcatcaacggtgtcgtcaccgaccaggtt
gactacctgacggccgatgacgaagtggagcggaccattgcccaggcaaacgccccgctg
cgcgaagaccagcacttcgccgaggacctcgtcctcgtccgtgcccgcggcggttccggc
gagcccgtcctcgttgagcccgaaggcgtcgagtacatggacgtctccccgcgccagatg
gtgtcggtggccacggccctgattccgttcctggaacacgatgacgccaaccgcgccctg
atgggtgcgaacatgcagcgccaggccgtgccgctgctccgttccgagcgccctgtggtg
ggtaccggcatggagaagtacgccgccgtcgacgccggggactccgtcaccgccgtcaag
cccggtgtcgtcaccgaggtctccgccgagctcgttaccgtcatgaacgacgacggcacc
gagtccaactacccgatcatgaagttcgcgcgctccaaccagggcaacgcgtacaaccag
cgggtactggtcgccgaaggcgcacgcgtcgaggtaaacagcatcatcgccgacggcccc
tccacggaccagggcgaactggcactgggtaagaacctgctcgtggcattcatgtcatgg
gaaggccacaactacgaggatgcgatcatcctctcccagcgcatggtctcggacgacgtc
ctgacctccatccacatcgaggagcacgaagtcgatgcccgcgacaccaagcttggtgcc
gaggaaatcacccgcgacatccccaatgtgtcggaggaagtgctctcccagctggacgag
cgcggcatcatccacatcggtgccgaggtggaagccggcgacatcctggttggccgcgtc
acccccaagggcgaaacggaactgaccccggaagagcggctgctgcgcgccatcttcggc
gagaagagccgcgaagtccgcgacacgtccctgaaggtaccccacggggagtccggcacg
gtcatcggtgtccgcatcttcgaccgtgacaacgacgacgagctgcccccgggcgtgaac
cagctggtgcgcgtctacgtggcgcacaagcgcaagatcacggacggcgacaagctggcc
ggccgccacggcaacaagggtgttatctccaagatccttccggtcgaggacatgcccttc
atggaagacggaacccccgtcgacatcgtcctgaacccgctgggtgttccgggtcgaatg
aacgtcggccaggtcctggaaatccacctgggctgggctgccaagcagggctggaagatc
gacggcaatccggagtgggtccagaacctgccggaactgccgcgtgaaaccggtccgacg
acggttgccaccccggtgttcgacggtgccagtgaagatgaaatcaccggtctgctcgat
tccaccaacgtgacccgcgacggcaaccgcctgatcggcgcttccggcaaggcacggatg
ttcgacggccgctccggccagccgttcccggagcccatttccgtgggctacatgtacatc
ctgaagctgcaccaccttgtggacgacaagatccacgcacgctccaccggtccgtactcc
atgatcacgcagcagccgctgggtggtaaggcgcagttcggtggccagcgcttcggtgaa
atggaagtctgggccctggaagcgtacggcgccgcctacacgctgcaggaactgctcacg
atcaagtccgatgacatccacggccgtgtgaaggtctacgaagccatcgtcaagggcgag
aacatcccggagccgggtgttccggagtccttcaaggtgctcatcaaggaaatgcagtcg
ctctgcctgaatgtggaagtactctccaccgagggcaacacgattgaaatgcgtgactcg
gatgaagaagtcttccgggccgcggaggaactgggtatcgatctgtcccgcgcagagccc
agctccgtcgaagaggtttag
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