Arthrobacter sp. PGP41: C3B78_10245
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Entry
C3B78_10245 CDS
T05450
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
arth
Arthrobacter sp. PGP41
Brite
KEGG Orthology (KO) [BR:
arth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
arth03051
]
C3B78_10245 (pafA)
Enzymes [BR:
arth01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
C3B78_10245 (pafA)
Proteasome [BR:
arth03051
]
Prokaryotic proteasome
Bacterial regulatory particles
C3B78_10245 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AUZ34787
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All DBs
Position
2255715..2257079
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AA seq
454 aa
AA seq
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MDKRIFGIETEFGISYSSPDSRPLAPEEVARYLFRKVVSWGRSSNVFLTNGSRLYLDVGS
HPEYATAECDDLAQLIAHDRAGELILDDLVDEAQARLAAEGFNGTVYLFKNNTDSAGNSY
GSHENYLIPRRGEFSRLAEILIPFLVTRQLIAGAGKILKTPHGATYAFSQRADHIWEGVS
SATTRSRPIINTRDEPHADAEFYRRLHVIVGDSNMSEATAMMKIGTVDLVLRMIEAGVIM
RDMRMENPIRSIREISHDLSGRALVRLANGRQLTALEIQQEYLTKVTAFVKEHGAHNPHV
PLILDLWERTLKAIESGDFRGIDTEIDWAIKKKLMDNYRERHGLGLDAPRIAQLDLTYHD
ISRSRGLYYLLQSRGAVRRIVDDTVVKDAVDVPPQTTRAKLRGDFVRRAQELGRDYTVDW
VHLKLNDRAHQTILCKDPFRSVDERVDALLDSMG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagaatcttcggcatcgaaaccgaattcggcatctcgtattcgagcccggac
tcgaggccccttgctcccgaggaggtggcccggtacctgttccgcaaagttgtcagctgg
gggcggtcctccaacgtcttcctgaccaatggctcccggctctaccttgacgtggggtcc
cacccggaatacgccaccgccgaatgcgatgaccttgcgcagctcattgcccatgacagg
gcaggggaactgatccttgacgacctcgtggacgaggcacaggcccgccttgcggccgaa
gggttcaacggaacggtctacctgttcaaaaacaacactgactccgccggaaactcctac
ggcagccacgaaaactacctcattccccggcgcggcgaattctcgcggctggcagaaatc
ctgatcccgttcctggtcacccgccagctgatcgccggcgccggcaagatcctcaagaca
ccgcacggggcaacgtacgccttttcccagcgggccgaccatatttgggagggcgtgtcc
tccgccaccaccaggtcccgacccatcattaacacccgcgacgagccgcacgcggatgcg
gaattttatcggcgcctgcatgtcatcgtgggcgattcaaacatgtctgaagccacggcc
atgatgaagatcggcaccgtggacctcgtgctgcgcatgatcgaggccggggtgatcatg
cgggatatgcggatggaaaacccgatccgcagcatccgtgagatctcccacgacctcagt
ggccgcgcactggtccgcctggcgaacggacgccagctgacggcactcgaaatccagcag
gagtatctgacgaaggtcaccgctttcgtgaaagagcacggcgcgcacaacccccacgtc
ccgctgatcctggacctttgggagcgcacgctcaaggccatcgaaagcggcgacttccgc
ggcatcgacaccgaaatcgactgggccatcaagaagaagctcatggacaactaccgtgaa
cgccatgggctgggcctggacgctccgcggatcgcccaactggaccttacttaccatgac
atctcgcgcagccgcggcctctactacctgcttcagtcccggggtgcagtccgccgtatt
gtggacgataccgtggtcaaagacgccgttgacgtcccgccccaaacaacccgcgcaaag
ctgcgcggcgacttcgtccgccgcgcccaggaactgggcagggactacaccgttgactgg
gtgcaccttaagctgaacgaccgggcgcaccagaccatcctgtgcaaggatcccttccgc
agcgtcgacgagcgtgtggatgcgctccttgactctatgggctga
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