Arthrobacter sp. UKPF54-2: E7Y32_09185
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Entry
E7Y32_09185 CDS
T10403
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
artu Arthrobacter sp. UKPF54-2
Pathway
artu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
artu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E7Y32_09185 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
artu03021
]
E7Y32_09185 (rpoB)
03400 DNA repair and recombination proteins [BR:
artu03400
]
E7Y32_09185 (rpoB)
Enzymes [BR:
artu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E7Y32_09185 (rpoB)
Transcription machinery [BR:
artu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E7Y32_09185 (rpoB)
DNA repair and recombination proteins [BR:
artu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E7Y32_09185 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QDY90364
LinkDB
All DBs
Position
2001091..2004606
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AA seq
1171 aa
AA seq
DB search
MVASSTSNVNNATAINADSTDGATRRLSFAKIHEPLDVPNLLALQTDSFDWLVGNERWQA
RVAKAVEEGDLSVATTSGLSDIFEEISPIEDFQGTMSLSFSEPEFADPKYTMAECKDRDA
TYSAPLYVKAEFMNNNTGEIKQQTVFMGDFPLMTEKGTFVVNGTERVVVSQLVRSPGAYF
ERTADKTSDKDIFTAKIIPSRGAWFELEIDKRDQVGVRLDRKRKQSVTVLLKALGWTEGQ
ILEEFGQYDSMRATLEKDATETREDALLDIYRKLRPGEPPTVEAAQSLLDNLYFNSKRYD
LAKVGRYKINRKLGIDRSLGDKEASVLHVEDIVAMIKFLVALHAGEKTLMGKRDGQDHEL
RVEIDDIDHFGNRRIRAVGELIENQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPV
VAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRM
CPIETPEGPNIGLIGSLASYGRINPFGFIETPYRLVSEGIVSDEVQYLTADDEAEVLIAQ
ANAPLDENKRFAEETVLVRARGGGGEPVLVPAADVEFMDVSPRQMVSVATALIPFLEHDD
ANRALMGANMQRQAVPLVRSEAPFVGTGMERAAAVDAGDVVIAKKAGVVTEVSAELVIML
NDDGTETNYRINKFARSNQGNCYNHRVLVNEGQRLEVGGIIADGPATDQGELALGKNLLV
AFMSWEGHNFEDAIILSQRIVAEDVLSSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVL
AGLDERGIIHIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPH
GESGTVIGVRVFDRDNDDELPPGVNQLVRVYVAAKRKITDGDKLAGRHGNKGVISKILPV
EDMPFLADGTPVDIVLNPLGVPGRMNVGQVLETHLGWVAKTGWKIEGEPEWVKQLPNLPR
ESGQTTVATPVFDGAREEEITGLLDSTNVTRDGDRLINSSGKTRLFDGRSGEPFPDPISV
GYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTL
QELLTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSTDGTTI
EMRDSDDAVFTAAEELGIDLSRAEPSSVEEV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcctcgagcacctctaatgtaaacaacgctaccgctatcaatgccgacagcacc
gacggtgcaacccgccggctctccttcgcaaagattcacgaaccgcttgacgttccgaat
ctgcttgccctgcaaacggacagcttcgactggctggtcggaaacgaacgctggcaggcg
cgcgtcgcgaaggccgtcgaggaaggcgacctcagtgtcgccaccacgtcgggcctgtct
gacatcttcgaagagatctccccgatcgaggacttccagggcaccatgtccctgagcttc
tccgagccggagttcgctgacccgaaatacaccatggccgagtgcaaggaccgggacgct
acgtactccgctccgctgtacgtcaaggccgagttcatgaacaacaacacgggcgaaatc
aagcagcagaccgtgttcatgggtgacttcccgctgatgaccgagaagggcaccttcgtc
gttaacggcaccgagcgtgtcgtcgtgtcccagctggtccggtccccgggcgcctacttc
gagcgcaccgcggacaagaccagcgacaaggacatcttcaccgcgaagatcatcccgtcc
cgcggcgcctggttcgaactcgaaatcgacaagcgcgaccaggtcggcgttcgcctcgac
cgcaagcgcaagcagtccgtcaccgtgctgctgaaggccctcggctggaccgaaggccag
atcctcgaggaattcggccagtacgactccatgcgcgcgacgctggagaaggacgccacc
gaaacccgcgaagacgccttgctggacatctaccggaagctgcgaccgggcgagccgccc
accgttgaggctgcccagtccctgctggacaacctgtacttcaactccaagcgctacgat
ctggccaaggtcggccggtacaagatcaaccgcaagcttggcatcgaccgctcccttggc
gacaaggaagcttcggtcctgcacgttgaagacatcgttgccatgatcaagttcctggta
gccctgcacgccggtgagaagaccctcatgggcaagcgcgacggccaggaccacgagctg
cgcgtcgagatcgacgacatcgaccacttcggcaaccgccgtatccgcgccgtcggcgag
ctcatcgagaaccaggtccgcaccggcctgtcccgcatggagcgcgttgtccgcgagcgt
atgaccacccaggacgtcgaggcgatcacgccgcagaccctgatcaacatccgccccgtc
gtggcagcgatcaaggagttcttcggaacgtcccagctctcgcagttcatggaccagaac
aacccgctgtcgggcctgacccacaagcgccgcctgtccgcgctgggcccgggcggtctg
tcccgtgaccgtgccggcatggaagtccgagacgtccacccgtcccactacggacgtatg
tgcccgatcgaaacccctgaaggcccgaacatcggcctgatcggttcgctggcatcgtac
ggccggatcaacccgttcggtttcatcgagaccccgtaccgcctcgtttccgagggcatc
gtttccgatgaggtccagtacctcaccgccgacgacgaggccgaggtcctgatcgcacag
gccaacgccccgctcgacgagaacaagcgtttcgccgaagagaccgtgctggtccgtgcc
cgcggtggtggaggcgagcccgtgctggttcccgccgccgacgtcgagttcatggacgtc
tccccgcgccagatggtgtccgtggcgaccgccctgatcccgttcctcgagcatgacgat
gccaaccgtgcactcatgggtgccaacatgcagcgccaggctgtgccgctggtccgctcc
gaggcgccgttcgtcggcaccggcatggagcgcgccgccgccgtcgacgccggtgacgtt
gtcatcgcgaagaaggccggtgtggtcaccgaggtttccgccgagctcgtcatcatgctc
aacgacgacggcaccgaaaccaactaccggatcaacaagttcgcccgctccaaccagggc
aactgctacaaccaccgtgtcctggtgaacgaaggccagcgcctggaagtcggcggcatc
atcgccgacggcccggcaacggaccagggcgagctcgccctcggtaagaacctgctcgtg
gcattcatgtcctgggaaggccacaacttcgaggatgccatcatcctgtcccagcggatc
gtggccgaggacgtcctgtcctcgatccacatcgaggagcacgagatcgatgcccgcgac
accaagcttggtgccgaggaaatcacccgtgacatcccgaacgtgtccgaggaagtcctg
gcaggcctggacgagcgcggcatcatccacatcggtgccgaggttgaagccggcgacatc
ctggtcggcaaggtcacccccaagggcgagaccgagctgaccccggaagagcgcctgctg
cgcgccatcttcggcgagaagtcccgcgaagtgcgcgacacctccctgaaggtgccccac
ggcgagtccggcaccgtgatcggtgtccgcgtcttcgaccgcgacaacgacgacgagctg
cccccgggcgtcaaccagctggtccgcgtctacgtggctgccaagcgcaagatcaccgac
ggcgacaagctcgccggccgtcacggcaacaagggtgttatctccaagatccttcccgtg
gaggacatgcccttccttgccgacggcacccccgttgatattgtcctgaacccgctgggt
gttccgggccgtatgaacgtcggccaggtgctcgaaacgcacctcggctgggttgccaag
accggctggaagatcgagggcgagcccgagtgggtcaagcagctgccgaacctgccgcgc
gaaagtggccagaccactgtcgccacgccggtcttcgacggtgcgcgtgaagaggaaatc
acgggcctgctcgactccaccaacgtcacccgcgacggggaccgcctgatcaactcctcg
ggcaagacccgcctgtttgacggccgctccggcgagccgttcccggatccgatctcggtc
ggctacatgtacatcctgaagctccaccacctggtggacgacaagatccacgcgcgctcc
accggcccgtactccatgatcacgcagcagccgctgggtggtaaggcgcagttcggtggc
cagcgcttcggtgaaatggaagtgtgggcgctcgaagcctatggcgcggcctacacgctc
caggaactcctcacgatcaagtcggatgacatccacggtcgtgtgaaggtctacgaagcc
atcgtcaagggcgagaacatcccggagccgggcgttcctgagtccttcaaggtcttgatc
aaggaaatgcagtcgctgtgcctgaacgtggaagttctttccacggacggaaccacaatt
gaaatgcgtgactctgatgacgcagtcttcacggctgcggaagaactgggcatcgatctg
tctcgtgcagagcccagttccgtagaagaggtctag
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