Arthrobacter sp. U41: ASPU41_08985
Help
Entry
ASPU41_08985 CDS
T05053
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aru
Arthrobacter sp. U41
Pathway
aru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASPU41_08985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aru03019
]
ASPU41_08985
03400 DNA repair and recombination proteins [BR:
aru03400
]
ASPU41_08985
Enzymes [BR:
aru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASPU41_08985
Messenger RNA biogenesis [BR:
aru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASPU41_08985
DNA repair and recombination proteins [BR:
aru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASPU41_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AOT03449
UniProt:
A0A1C9WR03
LinkDB
All DBs
Position
1930266..1932467
Genome browser
AA seq
733 aa
AA seq
DB search
MANHQNAAVLSALPPAEAAGTAGGAGTREQAQEVLRELVGHPEAQFHDGQFEAIEALVDG
GRRALVVQRTGWGKSAVYFVSSLLLRRRGAGPTLIVSPLLALMRDQVAAAARAGVRAVAI
NSANQLDWDTVREQLAADEVDVLLVSPERLTNPSFRENQLPELIRRTGLLVIDEAHCISD
WGHDFRPDYRRIADLITQLPDTVPVLATTATANSRVVHDIEEQLGAGVLTIRGALGRESL
RLGVLSLPDSRDRLGWLLTHLKDLPGSGIIYTLTVSAAEDTARLLAEAGHEVLAYTGRTD
PADRERAEQLLKDNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRGA
ANADVLLLPGSEDRDIWQYFATASMPSEQKAGAVLTALAEAGTAVSTVALEARVDLRRTP
LELLLKVLAVDGAVERVGGGWRATGQPWNYDAERYSRIAEARVDEQDSMVIYQDTAGCRM
EYITSVLDDETAHACGRCDNCAGQWFPADIAASATEAAGQTLSRAGVPLEPRLQWPSGMD
RLGVPVKGKIKPEENVAHGRALARLTDLGWGGALREAFAAGAPDRAVDPGMLQACVQVLR
EWGAGDARTPGWSGAGRPAAIISVPSRGKPALVDSLARGISEIGRIPYLGQLQLEHGGPT
GGRGGNSAYRLAGVWERLVVGPELEAALAGTQGQSVMLIDDLVDSRWTVTVAGRALRLAG
AGAVLPLVLGQAG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcaccagaacgctgcagtcctttccgctttgcctcccgctgaggccgccggt
actgccgggggcgccgggacccgggagcaggcccaggaagtgctgcgcgaactggtcggg
cacccggaggcgcagttccatgacggccagttcgaagccatcgaggccctcgtcgacggc
ggccggcgggccctcgttgtgcagcgcaccggctggggcaagtcggccgtgtactttgtc
tcgtccctgctgctgcggcgccgcggcgccggcccgaccctgattgtgtccccgctgctg
gccctcatgcgtgaccaggttgccgccgccgcgcgggccggggtccgcgcggtggccatc
aactccgccaaccagctggactgggacaccgtccgcgaacagcttgcggcggacgaggtc
gatgtcctgctggtctcgccggagcgcctcaccaacccctcattccgcgagaaccagctc
ccggaactgatccgccgcaccgggctcctggtcatcgacgaggcgcactgcatctcggac
tggggccacgatttccgtcccgactaccggcgcatcgcggacctgatcacccagttgccg
gataccgttccggtcctggccaccaccgccaccgccaactcccgggtggtccacgacatc
gaggagcagctgggcgccggagtgctgacgatccgcggcgccctgggccgtgaatcgctc
cggctgggtgtgctgagcctgccggactcccgggaccggctcggctggttgctcacgcac
ctcaaggacctgcccggcagcggaatcatttacacgctgactgtttccgcggccgaagac
accgccaggctgctggccgaagccggacacgaggtgctcgcctacaccggacgcaccgac
cccgcggaccgcgaacgagccgagcagctcctcaaggacaaccaggtcaaggcgctcgtc
gccacctccgcccttggcatgggcttcgacaaaccggacctcggttttgtggtgcacctt
ggggcgccatcctctcccgtggcctactaccagcaggtgggccgtgccggccgtggcgcc
gccaacgccgacgtgctgctgctgcccggctccgaggaccgcgatatctggcagtacttc
gcgaccgcatcgatgccctcggagcagaaggccggtgcggtgctgaccgcgctcgccgag
gcggggaccgccgtgtccacggtggcgcttgaagcgcgcgtggacctgcgcaggacgccg
ctggagctgctgttgaaggtgctggcggtcgacggcgccgtggagcgggtgggcgggggc
tggcgggccaccggccagccgtggaactacgacgccgagcgctacagccggatcgcggag
gcccgggtggacgagcaggactccatggtgatctatcaggacaccgccggctgccggatg
gaatacatcacctcggtcctggacgacgagaccgcccacgcctgcggccgctgcgacaac
tgcgccggacagtggttcccggcagacattgccgcctcggccaccgaagccgccggccag
acgctgagccgcgccggggtacccctggaaccccggctgcagtggcccagcggcatggac
cggctgggcgtgccggtgaagggcaagatcaaacccgaagaaaacgtcgcgcacggccgg
gcgctggcacggctcaccgacctgggctggggcggcgccctgcgcgaagccttcgccgcc
ggagcccccgaccgcgcggtggacccgggcatgctgcaggcctgtgtccaggtgctgcgc
gagtggggcgccggggacgcccgcacccccggctggagcggggcaggccggcccgccgcc
atcatcagcgtcccgtcccgtggcaaaccggccctggtggactcgctggcccggggcatc
tcggagatcggccggatcccgtacctggggcagctgcagctggagcacggcggaccgacc
ggcgggcgcggcggcaacagcgcctaccgtcttgccggggtctgggaacgcctcgtggtc
ggaccggagctggaagcagccctggccgggacccagggccagagcgtgatgctcatcgac
gatctggtcgacagccgctggaccgtgaccgtcgccggccgtgccctcaggcttgcgggc
gccggggcggtgctgccgctggtgctgggccaggccggctga
DBGET
integrated database retrieval system
