KEGG   Arthrobacter sp. U41: ASPU41_10030
Entry
ASPU41_10030      CDS       T05053                                 
Name
(GenBank) recombinase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
aru  Arthrobacter sp. U41
Pathway
aru03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ASPU41_10030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aru03019]
    ASPU41_10030
   03400 DNA repair and recombination proteins [BR:aru03400]
    ASPU41_10030
Enzymes [BR:aru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ASPU41_10030
Messenger RNA biogenesis [BR:aru03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ASPU41_10030
DNA repair and recombination proteins [BR:aru03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ASPU41_10030
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII HTH_IclR
Other DBs
NCBI-ProteinID: AOT05488
UniProt: A0A1C9WWT9
LinkDB
Position
complement(2174132..2175823)
AA seq 563 aa
MPADDDAGLRRLADATFGLPHLREGQLTGMRALAAGRDVLAVMPTGYGKSAIYQVPALLL
HRQQQRPTVVVSPLISLQEDQLDGLRDAAGPGSAVAVNSSHSAAEQERAWQAVECGEAAF
LFLAPEQLAKPSTVARIAALNIALFVVDEAHCVSSWGHDFRPDYLRLGEVRERLGNPTTA
ALTATASPPVREEILARLGMTNPLILVHGFDRPNIVLEVRRHHEDKEKRRAVVEQVTELV
AGTRGPGLVYAAKRRDTEKYAAKLARSGLRAAAYHAGRTPAERELVHQQFLDSGLDVVVA
TTAFGMGIDKPDVRFVLHADIPESLDSYYQQIGRAGRDGLPAAAVLHYRSEDLGLRRYFA
THTPDQAALRTVLTALRAAGRPLQPRALAEGTVWPARRITGLLNQLQETGAVTADPDGVR
LDPAADPAQVVERAVELAAARERVDKSRIAMIRSYAETRRCRRQFLLGYFGEDLPGPCGN
CDNCTDGSALQQERGEHTGTPDGGADAGPNEAFPVNSRVEHALWGPGLVMGHDGDLLTVL
FDREGYRTLSRKAVLGHGLLTPA
NT seq 1692 nt   +upstreamnt  +downstreamnt
attccagcggacgacgacgccggactccgccggctcgcggacgccaccttcggcctgccg
cacctccgcgaaggccagctcacggggatgcgcgccctcgccgccggccgggacgtcctc
gccgtcatgcccaccggctacgggaagtcggccatctaccaggtccctgcgctgctgctg
caccgccagcaacagcggcccaccgtcgtcgtgtccccgctgatctccctgcaggaggac
cagctggacgggctgcgggacgccgcggggccgggcagcgccgtcgcggtcaactcctcg
cacagcgccgcggagcaggagcgtgcgtggcaggcggtggaatgcggcgaggcggcgttc
ctcttcctcgccccggagcagctggccaagcccagcaccgtggcacggatcgcggcgctc
aacatcgccctgttcgtggtggacgaggcgcactgcgtctcctcctggggccacgatttc
cggcccgactacctccgcctcggcgaggtccgcgagcgcctcggcaacccgaccaccgcc
gcgctgacggccacggcctctcccccggtgcgcgaggagatcctggcccgcctcggcatg
accaacccgctgatcctggtccacggcttcgaccggcccaacatcgtcctcgaggtgcgc
cgccaccacgaggacaaggagaagcgccgggccgtcgtcgagcaggtcaccgagctggtc
gccggaacgcgcgggcccgggctcgtgtacgccgccaaacgcagggacaccgaaaagtac
gccgcgaaactggcccggagcggcctgcgcgccgcggcctatcacgccggccgcacaccc
gccgagcgcgaactggtccaccagcagttcctcgacagcggcctggacgtggtggtggcc
accaccgctttcggcatggggatcgataagcccgatgtccgcttcgtcctccacgcggac
atcccggaatccctggacagctactaccagcagatcggccgggccggacgggacgggctg
cctgccgccgcggtcctgcattaccgctccgaggacctcgggctacggcgctacttcgcc
acgcacacccccgatcaggccgcgctgcggacggtcctgaccgcactgcgcgccgcgggc
cggccgctccagccccgggcgctggccgaggggaccgtgtggcccgcccggcggatcacc
ggcctgctgaaccagctgcaggagaccggcgccgtcaccgcagaccccgacggggtccgg
ctcgaccccgcggcggatcccgcccaggtggtggaacgcgccgtcgagctcgccgcagcc
cgcgagcgcgtggacaagtcccgcatcgccatgatccgcagctacgccgaaacgcgccgc
tgccgccgccagttcctgctcggctacttcggcgaggacctgcccggcccctgcgggaac
tgcgacaactgcaccgacggctccgcgctgcagcaggagcgcggcgagcacaccggaacg
cccgacggcggtgctgacgccggccccaacgaggcctttccagtgaactcccgcgtggag
catgccctttggggcccgggcctggtgatggggcacgacggcgacctcctcaccgtgctg
ttcgaccgcgagggctaccggacgctgtcccgcaaagccgtcctcggccacggcctgctc
acgcccgcctga

DBGET integrated database retrieval system