Arthrobacter sp. U41: ASPU41_10030
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Entry
ASPU41_10030 CDS
T05053
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aru
Arthrobacter sp. U41
Pathway
aru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASPU41_10030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aru03019
]
ASPU41_10030
03400 DNA repair and recombination proteins [BR:
aru03400
]
ASPU41_10030
Enzymes [BR:
aru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASPU41_10030
Messenger RNA biogenesis [BR:
aru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASPU41_10030
DNA repair and recombination proteins [BR:
aru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASPU41_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AOT05488
UniProt:
A0A1C9WWT9
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All DBs
Position
complement(2174132..2175823)
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AA seq
563 aa
AA seq
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MPADDDAGLRRLADATFGLPHLREGQLTGMRALAAGRDVLAVMPTGYGKSAIYQVPALLL
HRQQQRPTVVVSPLISLQEDQLDGLRDAAGPGSAVAVNSSHSAAEQERAWQAVECGEAAF
LFLAPEQLAKPSTVARIAALNIALFVVDEAHCVSSWGHDFRPDYLRLGEVRERLGNPTTA
ALTATASPPVREEILARLGMTNPLILVHGFDRPNIVLEVRRHHEDKEKRRAVVEQVTELV
AGTRGPGLVYAAKRRDTEKYAAKLARSGLRAAAYHAGRTPAERELVHQQFLDSGLDVVVA
TTAFGMGIDKPDVRFVLHADIPESLDSYYQQIGRAGRDGLPAAAVLHYRSEDLGLRRYFA
THTPDQAALRTVLTALRAAGRPLQPRALAEGTVWPARRITGLLNQLQETGAVTADPDGVR
LDPAADPAQVVERAVELAAARERVDKSRIAMIRSYAETRRCRRQFLLGYFGEDLPGPCGN
CDNCTDGSALQQERGEHTGTPDGGADAGPNEAFPVNSRVEHALWGPGLVMGHDGDLLTVL
FDREGYRTLSRKAVLGHGLLTPA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
attccagcggacgacgacgccggactccgccggctcgcggacgccaccttcggcctgccg
cacctccgcgaaggccagctcacggggatgcgcgccctcgccgccggccgggacgtcctc
gccgtcatgcccaccggctacgggaagtcggccatctaccaggtccctgcgctgctgctg
caccgccagcaacagcggcccaccgtcgtcgtgtccccgctgatctccctgcaggaggac
cagctggacgggctgcgggacgccgcggggccgggcagcgccgtcgcggtcaactcctcg
cacagcgccgcggagcaggagcgtgcgtggcaggcggtggaatgcggcgaggcggcgttc
ctcttcctcgccccggagcagctggccaagcccagcaccgtggcacggatcgcggcgctc
aacatcgccctgttcgtggtggacgaggcgcactgcgtctcctcctggggccacgatttc
cggcccgactacctccgcctcggcgaggtccgcgagcgcctcggcaacccgaccaccgcc
gcgctgacggccacggcctctcccccggtgcgcgaggagatcctggcccgcctcggcatg
accaacccgctgatcctggtccacggcttcgaccggcccaacatcgtcctcgaggtgcgc
cgccaccacgaggacaaggagaagcgccgggccgtcgtcgagcaggtcaccgagctggtc
gccggaacgcgcgggcccgggctcgtgtacgccgccaaacgcagggacaccgaaaagtac
gccgcgaaactggcccggagcggcctgcgcgccgcggcctatcacgccggccgcacaccc
gccgagcgcgaactggtccaccagcagttcctcgacagcggcctggacgtggtggtggcc
accaccgctttcggcatggggatcgataagcccgatgtccgcttcgtcctccacgcggac
atcccggaatccctggacagctactaccagcagatcggccgggccggacgggacgggctg
cctgccgccgcggtcctgcattaccgctccgaggacctcgggctacggcgctacttcgcc
acgcacacccccgatcaggccgcgctgcggacggtcctgaccgcactgcgcgccgcgggc
cggccgctccagccccgggcgctggccgaggggaccgtgtggcccgcccggcggatcacc
ggcctgctgaaccagctgcaggagaccggcgccgtcaccgcagaccccgacggggtccgg
ctcgaccccgcggcggatcccgcccaggtggtggaacgcgccgtcgagctcgccgcagcc
cgcgagcgcgtggacaagtcccgcatcgccatgatccgcagctacgccgaaacgcgccgc
tgccgccgccagttcctgctcggctacttcggcgaggacctgcccggcccctgcgggaac
tgcgacaactgcaccgacggctccgcgctgcagcaggagcgcggcgagcacaccggaacg
cccgacggcggtgctgacgccggccccaacgaggcctttccagtgaactcccgcgtggag
catgccctttggggcccgggcctggtgatggggcacgacggcgacctcctcaccgtgctg
ttcgaccgcgagggctaccggacgctgtcccgcaaagccgtcctcggccacggcctgctc
acgcccgcctga
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