Altererythrobacter rubellus: QQX03_03325
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Entry
QQX03_03325 CDS
T09134
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
arue
Altererythrobacter rubellus
Pathway
arue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QQX03_03325 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arue03021
]
QQX03_03325 (rpoB)
03400 DNA repair and recombination proteins [BR:
arue03400
]
QQX03_03325 (rpoB)
Enzymes [BR:
arue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QQX03_03325 (rpoB)
Transcription machinery [BR:
arue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QQX03_03325 (rpoB)
DNA repair and recombination proteins [BR:
arue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QQX03_03325 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WIW96151
UniProt:
A0A9Y2B8X5
LinkDB
All DBs
Position
669296..673483
Genome browser
AA seq
1395 aa
AA seq
DB search
MATKAKAPKASGTAKKRIRKIFGDIHEVVDMPNLIEVQRESYEQFLRSNKEIDYVSGLEK
TLRSVFPIRDFAGTAELDFVHYVLEEPKHDTTECKQRGITYAAPMKVTLRLIVFEVDQET
ETRSVLDIKEQDVYMGDMPLMTGNGTFIINGTERVIVSQMHRSPGVLFDHDRGKTHSSGK
LLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLYALGMDSEEILDHFYDKVA
WKRASGKKGEGWTIPFVAEQWRGQKPAFALVDAKTGEEIFPAGHKISPRAANKAEKDGLK
ELLLPTEEIVSRYASVDMIDEKTGRIYVEAGDELTLEHVEALDNAGIDQINLLDIDEINT
GPWIRNTLKVDKAENREEGLEAIYKVMRPGEPPTLETAEALFEGLFFDSERYDLSAVGRV
KLNMRLDLDAEDTVTTLRKEDILAVVKELVGLKDGKGDIDDIDNLGNRRVRSVGELLENQ
YRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSE
VTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLASFSRVNK
YGFIETPYRTVADGKVTSEVIYLSAMEEQRHTVAQASAELNEDGSFAEEFVSARQNGDYF
MAPREQITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPWVGTG
MEETVARDSGAAITASRGGVVDQVDATRIVIRAIGDVEPGQSGVDIYSLQKFQRSNQNTC
INQRPLVKVGDVIEQGDIIADGPSTDLGELALGKNSLVAFMPWNGYNYEDSILISERIVK
DDVFTSIHIDEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAQVHPGDILV
GKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVEVRVFNRHGIEIDDR
TRAIQHEEIERLRKDSQDERAILNRATYNRLKDMLIGQTASAAPKAVKKGEKITEEMLEG
VERFEWFKFAVANDKRQTQIEAVKSQYDEAVAVIDAKFEDRKEKLERGDELAPGVLKMVK
VFVAVKRKLQPGDKMAGRHGNKGVISRILPIEDMPFLEDGTPVDIVLNPLGVPSRMNVGQ
IFETHLGFAARGLGMQIAEDLEQWKLDNPNAAEDYKKAKPPTAVIDRLKNVYGEQYHDEI
DARSTEEIVELAGNLTAGVPMGTPVFDGAREGDVTTELEKAGIHSSGQSVLHDGRTGDAF
DRKVTVGIIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAY
GAAYTLQEMLTVKSDDVVGRSKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELKS
LSDGEDEDEWPEAAE
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaaggcaaaggccccaaaggcgtcgggtacagcaaagaagcgtatccgtaag
attttcggcgacatccatgaagtagtcgatatgccgaacctgatcgaggttcagcgcgaa
agctacgaacagttccttcgttcgaacaaggaaatcgactatgtttccggtctggaaaag
acgctgcgcagcgttttcccgatccgtgattttgccggcacggccgagcttgatttcgtt
cactacgtgttggaagagccaaagcacgacaccacagagtgcaagcagcgcggaattacc
tatgctgcgcccatgaaggtgacgctgcgcctgatcgtgttcgaagtcgaccaggaaacc
gaaacccgctccgtcctcgatatcaaggaacaggatgtttacatgggcgatatgccgctc
atgaccgggaacggcacattcatcatcaatggcacagaacgtgttatcgtgtcgcagatg
caccgttcgccaggtgtgctgtttgaccatgaccgcggcaaaactcacagctcgggcaag
cttctgtttgcagcgcgcgttattccatatcgcggcagctggctagattttgaattcgac
gccaaggacatcgtgaacgtccgcatcgaccgcaagcgcaagctgcctgtaacggcgctg
ctctacgcgcttggcatggatagcgaagaaatcctcgaccacttctatgacaaggtcgcg
tggaagcgtgcctctggcaagaagggcgaaggctggactatcccgttcgtggcggagcaa
tggcgcggtcaaaagcccgcgtttgctctggtcgacgccaagaccggcgaagaaatcttc
ccggccggccataagatcagcccgcgcgcagcgaacaaggcggaaaaagacggcttgaaa
gagctgctgcttccaaccgaagagatcgtaagccgttatgcatcggtcgacatgatcgat
gagaagaccggccgcatctatgtcgaagcgggtgatgaactcacgctggagcatgtcgaa
gcgctcgataacgctggcatcgaccagatcaatctgttggacattgacgagatcaatacc
ggtccgtggatccgcaacacgctgaaagtcgacaaggctgaaaaccgtgaagaaggcctt
gaggccatctacaaggttatgcgtccgggcgaaccgcctacactcgaaaccgctgaagcc
ctgttcgaaggcctgttcttcgacagcgagcgctacgacctttctgcggttggccgtgta
aagctcaacatgcgtttggatctcgatgcagaagacacagtcaccacgctgcgcaaggaa
gacattcttgctgtggttaaggagctggtcggcctgaaagacggcaagggcgatatcgat
gacatcgataaccttggcaaccgccgtgttcgctctgtgggtgagctgcttgaaaaccag
taccgcgtcggcctgttgcgcatggagcgcgcggtcaaggaacgcatgagcagcgtcgat
gtgtcgacagtgatgccgaatgatctgatcaacgcgaagccggctgtggccgctgtgcgt
gaattcttcgggtcttcgcagctctcgcagttcatggaccagaccaacccgctgtccgaa
gtcacccacaagcgccgcgtatcggcgcttggcccgggcggtctgacacgcgaacgcgca
ggatttgaagtccgcgacgttcacccgacccactatggtcgtatctgcccgattgaaacg
cctgaaggcccgaacatcggtctgatcaactcgctggcatcattcagccgcgtgaacaaa
tacggctttatcgaaacgccataccggactgttgctgatggcaaggtcaccagcgaagtg
atctatctgtccgcgatggaagagcagcgtcacactgttgcgcaggcttcggccgagctc
aacgaagacggcagctttgcggaagaattcgtctctgcacgtcagaatggcgattacttc
atggcgccgcgtgagcagatcacgttgatggacgtttcgcccaagcagctcgtttcggtt
gcagcctcgctgatcccgttcctagagaacgatgacgcgaaccgcgccttgatgggatca
aacatgcaacgtcaggctgtgccgctggtcaaggcggaagcgccttgggttggcaccggc
atggaagagaccgtggcgcgcgattcgggcgctgcgatcactgccagccgcggcggtgtc
gttgaccaggttgatgcgacccgtatcgtgatccgcgcgatcggcgatgtagagccaggc
cagtcaggcgtggacatctattcgcttcagaagttccagcgttcgaaccagaacacctgc
atcaaccagcgtccgctggtgaaggtgggcgacgtgatcgagcaaggtgacatcatcgct
gacggtccgtcgaccgatctgggcgaactggcactgggcaagaacagcctggtcgccttc
atgccgtggaacggatacaactacgaagactcgatcctgatcagcgagcgcatcgtgaaa
gacgatgtgttcacttcgatccatatcgatgaattcgaagtgatggcacgtgacaccaaa
cttggtccggaagacatcacacgcgatattccgaacgtcggtgaagaagctctccgtaat
ctggacgaagcaggtatcgtatatatcggtgcgcaagtgcatccgggcgatattctggtc
ggcaagattactccgaagggcgaaagcccgatgacgccggaagaaaagcttctgcgcgct
atcttcggagagaaagcttcggatgttcgcgatacgtcgctgcgtctgccgccgggtgtt
gcgggcacgatcgttgaagtgcgtgtgttcaaccgtcacggtatcgagatcgatgaccgt
acacgggcgatccagcatgaagagatcgagcgcctgcgcaaggacagtcaggacgagcgc
gcgatcctgaaccgtgcaacctacaaccgcctgaaggacatgctgatcggtcaaaccgct
tctgcagcaccgaaggctgtgaagaagggcgagaagatcaccgaagagatgctggaaggt
gttgaacgtttcgagtggttcaagttcgctgttgcgaatgacaagcgccagacgcaaatc
gaagcggtgaagagccagtacgacgaagccgtcgctgtgatcgatgccaaattcgaagac
cgtaaggaaaagctggagcgcggtgacgagctggcaccaggtgttctcaagatggtcaag
gtcttcgtggctgtgaagcgcaagctgcagccgggcgacaagatggccgggcgtcatggt
aacaagggtgtgatttcgcgcattctgccgatcgaagacatgccgttccttgaggatggt
actccggtcgacatcgtgcttaacccgctgggcgtgccttcgcgtatgaacgtaggtcag
atctttgagacgcaccttggcttcgcagcgcgcgggctgggcatgcagatcgctgaagat
cttgaacagtggaagctggacaacccgaacgcggcggaagactataagaaagccaagccg
cctacagcggtcattgaccgtctgaagaatgtctatggtgagcagtatcacgatgaaatc
gatgcccgcagcaccgaggaaatcgtcgagcttgccggcaatctgactgcgggtgtcccg
atgggcacaccggtgtttgacggcgcgcgtgaaggcgatgtgacgaccgagcttgagaaa
gccggcattcacagctctggccagtcggtcctccatgatggccgcacaggtgacgcattt
gaccgtaaggtgacagtgggcatcatctacatgctcaagctgcaccacctggttgatgac
aagatccacgcacgttcgatcggtccgtactcgctcgtcacgcagcagccgctgggtggt
aaggcgcagttcggtggccagcgctttggtgagatggaagtctgggcactgcaggcatat
ggcgctgcttacaccctgcaggaaatgctcactgtcaagtctgacgacgtggttggccgt
tcgaaggtttacgaggcgatcgtcaagggtgacgataccttcgaagcgggcattccagag
agcttcaacgttctcgtgaaggaaatgcgcagccttggcctcaatgtcgaactgaagtcg
ctgagcgatggcgaagacgaggacgaatggccggaggcggcggaataa
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integrated database retrieval system
