KEGG   Altererythrobacter rubellus: QQX03_07730
Entry
QQX03_07730       CDS       T09134                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
arue  Altererythrobacter rubellus
Pathway
arue02024  Quorum sensing
arue03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:arue00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QQX03_07730 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QQX03_07730 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arue03019]
    QQX03_07730 (hfq)
   03036 Chromosome and associated proteins [BR:arue03036]
    QQX03_07730 (hfq)
Messenger RNA biogenesis [BR:arue03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     QQX03_07730 (hfq)
Chromosome and associated proteins [BR:arue03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    QQX03_07730 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: WIW94864
UniProt: A0A9Y2B3Y0
LinkDB
Position
1547021..1547560
AA seq 179 aa
MSDGRTLSARPSSAPAAPQSSGKQAKLQDAFLNLMRRNKTPVTIFLVKGVKLQGIVTWFD
NFSLLLRRDGQSQLVYKHAISTIMPGQPIEAEQFTSQLDNGKQRLLQDVFLSCVSESEVE
VTMFLVNGVMLQGQIASYDLFCVLLERDGFVQLAYKHAVSTIQPASHVDLSGDWEGEED
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtctgatgggcgaaccctctctgcccgccctagttccgctccagctgctccgcagtct
agtggcaagcaagcgaagcttcaggacgctttcctcaatctcatgcgccgcaacaagacg
cctgtgaccatctttctggtcaagggcgtgaaactgcagggtattgtcacctggttcgat
aatttctcgctgttgctgcggcgcgatggccaatctcaactggtctacaagcatgcgatc
agcacgatcatgcccggccaaccaattgaggccgagcagttcacaagccagctggacaac
ggaaaacagcgccttttgcaggacgtgttcctctcttgcgtcagcgagagcgaagttgaa
gtcacgatgttcttggtgaatggcgtaatgctgcagggacagattgcatcctacgatctt
ttctgtgttctgcttgagcgcgatggctttgtgcaacttgcgtacaaacacgctgtgtca
acgatccaacccgcgagtcatgttgacttgagcggtgattgggaaggcgaggaagactga

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