Luidia clathrata (European starfish): 117293459
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Entry
117293459 CDS
T10152
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arun04040
]
117293459
Ion channels [BR:
arun04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117293459
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
Ank
Ank_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
117293459
NCBI-ProteinID:
XP_033631694
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All DBs
Position
8:complement(21378461..21436556)
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AA seq
1108 aa
AA seq
DB search
MPAYYHVDAASDRIAMKIVRKEAPLSTVERAFILAIERGDYGTVRLALEEADIYFNLNKN
CVDSLGRTGLLIAIQNENIEIIELLLKHNVHVGDALLHAIDEEVVEAVEILLSYKPPKKD
IRARIIQEQNETDFTPDISPVILAAHRNNYEILKILLERGASIPKPHNVKCGCDDCLSSI
RHDGLRHSRSRLNIYRALASPSLIALSSDDPLLTAFELSWELRKLSYRENEFKTDYDKLV
QQCREFATNLLDQTRGSKELEMMLNRDNDSMTGEDTLSRLRLALHYKQKQFVAHPNCQQL
IAEVWYQGLPGWRRQHFTAKFLISVFVGISFPLLSLAYFLAPRTRVGQILRLPFLKFICH
SASYLLFLVLLILASLDLNGESDRVDERAPPPSDIEILIVVWVLGYIWAEVKQLWDMGVT
QYQRDWWNSLDYVTNTLYVTVIGLRVTAFINLKIMYNPNHGPIVLKRAEWDEWDPTLMAE
AVFAVANIFSMLRVVYFFTANSQLGPLQISLGRMVEDIVKFLFLMTLVLFSFAAGLYQLY
WVYVVREERLPDSTDKVCFGVSCREQNNAFTDLFQTLQTLVWAIFGLVELSNVKVVPEHG
VTEFIGALMFGVYCIITVIVLLNLLIAMMNDSFQKIQTKSDMEWKFARSKLWMSYFDEGE
TLPVPFNIIPSPKSIYYIFRAMYRFIYKKRKRGHQENIAVIKANLAEKRRINNEEYQKVV
RNLVKRYLNNNRRGQRAEGVSEDDLNEIKQDISAFRYEILEILKNPPKSVDTGTEASSKG
SRGSKKAVSIAEMGTSYSVTSMSSVSSNSSSPQLDRVPSFLMRKGKKNKRSPQHRESMHK
PLKCDPIEEEDYSLPDFLKVKNVKNVVSAVNEMKRSSRKRRLRELLSKESLSSAASASIP
ERIEEGVVLAESPRRIQSQASVEMNDEEMDAIMKQGITDDTVGNIASTTSEDESDDPFKG
SGVGGDSKTPVHRVKSFATHGGHDNEALHLEESGGEEETTQPTRRENSGDSQSTSGIASP
NNSFQSQDSVDGEQSGVPTAARPYESASDPDDYCVETGMNVALRPKTKNNGPKSKCPPKR
SSFLWGGRKPLEDEDVELTDLQYNGAQS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcctactatcatgtcgatgcggccagcgaccgtatcgccatgaagattgtccgc
aaagaggcccctctatcgaccgtagagagagcctttatccttgccatagagcgaggtgac
tatggcaccgtacgcctggccctggaggaagctgacatttatttcaatcttaataagaac
tgcgtggactccttagggcgtaccggactccttattgccatacagaatgaaaatattgag
attattgagttacttctgaagcacaacgtacacgttggggacgctctactgcatgctatt
gatgaagaagttgttgaagctgtagagattttactgagttacaaaccaccaaagaaagat
attcgggctcgaatcatccaagaacaaaatgaaacggattttactcctgacatcagtcca
gtgatcctcgctgcccatcggaataactacgagattctaaagatcttactggaacgtgga
gcctccatccccaaaccacataatgtcaaatgtggttgtgatgactgcctctccagtata
cgacacgatggactgaggcattctcgatctaggctcaacatctaccgagcactcgctagc
ccttcccttattgctctgtcgagtgatgacccactactaacagcctttgagctgagctgg
gagctaaggaagctaagctatcgtgaaaacgagttcaagaccgattatgacaagcttgta
caacagtgccgagagtttgctacgaatcttcttgatcaaacccggggttctaaggaactt
gaaatgatgctaaatagagacaatgattcgatgacgggtgaagatacattgagtcgactt
cggttagctctccactataaacaaaaacagtttgtggcccatcctaactgtcaacagctg
attgcagaggtctggtaccaaggcttacccggatggcgtcgtcaacacttcacagccaag
ttcttgattagtgtgttcgtaggcatttccttccctcttctatcgctagcttacttctta
gctccccgtacgagggtaggccagatactccgtcttccattcctcaagttcatttgccac
agtgcatcgtatttgttgttccttgtcttgctgattcttgcatcgctggacctgaatggg
gaatcagacagggttgatgaaagggcgcctccaccgtcagatattgaaatattaatcgtc
gtgtgggtcttaggttacatatgggctgaagtgaaacaattgtgggatatgggcgtgacg
caatatcaacgagattggtggaattctctggactatgtaaccaacactttgtacgtcaca
gtgatagggcttcgagtaactgcatttataaatttgaaaatcatgtataatcctaatcac
ggacccattgttctaaagcgagccgaatgggacgaatgggaccccactctaatggcagaa
gctgtatttgctgtggcaaatatattcagtatgctacgagttgtctacttctttaccgca
aactcccagcttggtcctctccagatctcactagggcgtatggttgaagacatcgtcaag
ttcctctttcttatgacgttggttttattctccttcgccgctggactctatcaactgtac
tgggtttatgtcgttagagaagagagacttcccgactcaacggataaggtttgctttggc
gtatcctgtcgggaacagaacaacgctttcacagatctttttcagacgttgcagaccttg
gtatgggctatatttggcctggttgaattatccaacgtaaaggtggtccctgaacatggt
gtgactgagtttattggtgctcttatgtttggagtctactgtattataacagtcattgtt
ttactcaacctactcattgctatgatgaatgactccttccagaaaatacagaccaagtca
gacatggaatggaagtttgctagatcgaaactatggatgagttactttgatgaaggggag
actcttccagttccatttaacatcatcccatcccccaaatcaatctactacatcttccgg
gccatgtatcgcttcatctacaagaaaaggaaacgtggacaccaggaaaatattgccgtt
atcaaggcgaatctcgctgagaagagaaggataaacaacgaagagtaccagaaagtagtt
cggaacttggtgaagcggtacctgaacaacaaccgccgaggacagagggctgaaggtgtg
agcgaagacgacctgaatgagatcaaacaagatatatcagcattccggtatgagatctta
gagattcttaagaaccctcccaagtctgtagatacaggaaccgaagcaagttccaaaggt
tcaagaggatctaagaaagcagtgtcaattgcagagatgggtacgagctactcagtgaca
tcaatgtcgtctgtctccagtaactcttcttcaccacaacttgacagagttccttcgttt
ctaatgaggaaaggaaagaagaacaagcggagcccacagcaccgggaatctatgcataaa
ccgcttaagtgtgatccgatcgaagaggaagattattctttaccagacttcttaaaggtg
aagaatgttaagaatgtagtgagtgctgtgaatgagatgaagagatcctcccgcaaacgg
agattgcgagagctcttatctaaagagtcacttagctcagctgcaagtgcttcaatccct
gagagaatagaagagggtgtggtcctggctgagtctcccagaaggattcagagtcaagct
tctgttgaaatgaacgatgaagagatggatgcaatcatgaaacaaggaataacagatgat
acagtcggaaacattgcatcaacaacgagtgaagatgaatctgacgatccattcaaaggt
agtggagtaggtggagactccaagaccccagtccatcgagtcaaatcattcgctacccat
ggtggtcatgacaatgaagccttgcatttagaggagagtggaggtgaggaggagacgacc
caaccaacccggcgggagaatagtggtgattcacagagtacttcgggtattgcttcacct
aataacagcttccaatctcaggactcagtagatggagagcagagtggagtccctacagct
gctcggccgtacgagagtgctagtgatcctgatgattattgtgtggagacgggtatgaac
gttgctttgagacctaaaacaaaaaacaacggaccaaagagtaaatgtccacctaagagg
tcttcatttctttggggaggtagaaaacctctcgaagatgaagatgttgagttgactgac
cttcagtataatggtgcccagtcgtaa
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