Luidia clathrata (European starfish): 117296164
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Entry
117296164 CDS
T10152
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117296164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117296164
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117296164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_16
TPR_19
TPR_8
TPR_11
TPR_12
TPR_CcmH_CycH
TPR_17
ANAPC3
RPN7
TPR_15
ARM_TT21_C
TPR_10
TPR_30
COG4_N
ChAPs
SNAP
Motif
Other DBs
NCBI-GeneID:
117296164
NCBI-ProteinID:
XP_033634939
LinkDB
All DBs
Position
10:10313903..10363006
Genome browser
AA seq
1559 aa
AA seq
DB search
MASGSSKEVKQTLRNARDAIKAKDYKEALEHCESVLKLDKNNYNALVFVGVAAAESDQPD
KALAAYRKAIKLDSQQLLAWQGLAGFCEKSENPDLKTELVDVYSHLGELLVTKDNKKWLD
VSEKLAKLHCQLGKTQEAIQVLKAIIKSGETSDPAACLRSWIQITELLAGVKVLSKDDVF
LLDKAYKVILETEASEPQHFSGYIKFLKKRDDITSDIVQSECLKMHDRFPLDPYPLTVIS
ELFLTHQPETLEDEALQIYTKLQELDGASGIASLGLGQVFLARKEYTTARDSLQRGLQTC
RDNVHGWLYLARTQLYTHDSQASVDSTKTGIKILKVKKNLASSQLKRALLIVQAKALLDG
ASVGEAEEALQIYKKLLCDEQQDDGNKLDILCGLCSTYLILGNAEKTKEFYEKAKVVNSQ
DDKVLALHGRICIAEGQFQQAEQRFLDTLSLASDCGLYHFWLGKVYWEMGQTTRSDKSKI
LASLLKAAKLDPYYSDTFLFLGHFYWKVVGDKSKGRKCYQKAFELKPSNEEAGMSLGDAC
VDLGDKESAVQLYRNVTQTAAAGTVKWAWLRLGLYYHHEGSPNEAIDSFQAALRTDPKDR
HCWECLGDAYMIRGSYTAALKAFTRGVELDPSATYCLYQIAAIKQMLEVYSEAVVEYQLI
LDSDPDYIPALKGQGETYVRLAKSSLQQYFNGRAVDYVKLAIQVLARASSLRPDLSCVWK
LLGDACTLLHPLSDSLISVTVPSNLIVDQSLRGKKAQSKKQLLAIGARCYGRALRLQSGC
SSLWHDLGMNYYHQSRNDDATSVVQLADKALQCLKKAIVVDSSNHSHWTALGVIASGKGV
DDPALAQHAFIKSIQVEPNNVVAWTNLGALYLVQGNQELAHQAFKIAQSLEPSYVQCWIG
QALVAETIVREEAMDLFRHTTELATHSEGAVGYAHWVCETLLDSSLDMTSQLYRYNIVQM
NAVSLATVGLDKVTDRIQTDACAHTMHGLLLERQGLHKSACKAFARALELVNNNRNQDVM
SIALANYARSLCSVGQYEEAVKHFQSVTPLIRLEDICCLALSLYKTGNLQASFQAYEQAL
QLATDGLIRSQLLTCLGMVAFQCGDQDRTKTLLFQSSQESEPSPEGLLALLALGVHLSDF
TLAEAAVTELKKFKDKQGFIADVSFAGTVIHALKGQYHLAYRQVAKAIRRHPGLPELWRL
MAEIILQLIPEKAQAAVKCSHASIQDKKATKGSVSVYALATLAMGLHSKSTPTSQRCVNA
AQKAVHLYPDSLENWAALSASYLLHGIWNSAQTHSEHVENNMASKLATFVHSWGKESENA
AIQKWSALQIVVSLLHEGKIERADALTRKLEVVYQSDAIMKSTLQLLQAEAVCMQHDSHQ
SIEFLRRVITMTSHQSSAAWQLLAKLYEKEGMVAAAESAYKQSVVHSQPGQQVVPFLRLA
HLALRAATVSSDERWLLLGLEATTEVLKIIPHCAIALLLQGLLQHHKGNTRPSKRCFQQV
LAISSDDKMNLARSVARFHMIQILLDKKDLSSAQVLVDEAAQENDLNLHQLQDLMSTAQ
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgggagcagcaaggaagtcaagcagaccttgaggaatgccagagatgcgatc
aaagctaaagactacaaagaagccctggaacactgcgagtcagtgcttaagttggacaag
aataactacaatgctcttgtgtttgttggtgtggctgcagctgagtcggaccagccagac
aaggcactggctgcttacaggaaggctatcaagttggactcgcaacaactcctagcttgg
cagggccttgcaggcttctgtgagaaaagtgagaaccccgaccttaagacagaactggtt
gatgtttacagtcacctgggagagctgctggttacaaaagacaacaagaaatggcttgat
gtatcggagaaacttgccaaactccactgtcaacttggcaagactcaagaggcaattcaa
gtgctgaaggccatcataaagtcaggagaaacatcggacccagcagcttgtttgagatcc
tggatacagattactgaactcttggctggagtcaaggtgttatcaaaggatgacgtcttc
ctgttggacaaagcctacaaagttattcttgaaactgaagcgtcagaaccacagcatttc
agtggctacatcaaatttttgaagaagcgagatgacatcaccagcgacattgtccaatca
gaatgtctgaagatgcatgaccggtttccactcgacccttaccccctcacagtcatctca
gagttattcttgacgcatcagccagaaacattggaggatgaagcgttgcaaatttacacc
aagctgcaagaactggatggagcatccggcattgcatcactcggtcttggacaggtgttt
ctagcacggaaggaatacaccactgcgagagacagtcttcaaagaggtcttcagacctgc
agagataatgtacatggctggctctacttagctagaacccaattgtatacgcatgacagt
caagcatcagtggactcaacgaaaacaggtatcaagatattgaaagtaaaaaagaacctg
gcatcatctcaactcaagagggctctcttgattgtacaagccaaagcacttttagatgga
gcctctgtgggtgaagcggaggaagctttacagatctacaaaaagttactttgtgacgaa
cagcaggatgatggcaataagttggacatcctctgtggactgtgctcaacatatcttatt
ctgggaaatgctgagaagaccaaagagttttatgagaaagcaaaagtggttaacagtcaa
gatgacaaggtgttggctctccatggaaggatctgtattgctgaaggtcaattccaacag
gcggaacagaggtttcttgacactttgagtcttgcatcagactgtggactttaccatttc
tggctgggaaaggtttactgggagatgggacagacaacaaggagtgacaagtcaaagata
ctggcgtcactgttgaaggctgcaaagttggatccttactattcagacacgtttctgttc
cttggccacttctactggaaagttgtcggtgacaaaagcaaagggagaaaatgctaccag
aaagcgtttgagttgaagccgagtaacgaagaagcagggatgtctttaggagatgcctgc
gttgacttgggagataaggaatctgctgtacagttatacagaaatgtgacccaaactgcc
gctgctggaactgtcaagtgggcgtggctgaggctgggattatactatcatcatgaaggc
agtcccaatgaggctatagacagcttccaggcagcactacgaactgatcctaaagacagg
cattgttgggaatgtcttggggatgcgtatatgattagagggagctatacagcagcactc
aaagcatttacaagaggagtagagcttgatccatctgcaacatactgtttgtatcagata
gcggctataaagcaaatgcttgaagtatactccgaagctgtggtggagtaccaactcatc
ttagacagtgacccagactatatccccgcattaaaaggtcagggggagacgtacgtccgt
cttgctaaatcctcgctccagcagtacttcaatggaagagcagtggactatgtcaagcta
gccattcaggtcttggcgagggcgtcgtcattgaggcctgatctgagctgtgtgtggaag
ctgttaggtgatgcctgcacattactacatcctctcagcgactcactcatcagtgtgaca
gtgcccagtaacctgatagtagaccagtcactacgcgggaagaaggcacagagtaagaag
caattgcttgccattggagcacggtgttatgggagagcactacgccttcagagtggttgt
tccagtctatggcatgatctaggtatgaattactaccatcagtctcgcaatgatgatgca
acgagcgtcgttcagcttgctgacaaggctctgcagtgtctgaagaaagccatagttgtg
gacagctctaaccacagtcactggacagctctgggtgttattgcatcaggcaaaggtgtg
gatgatcctgcactcgcacaacacgcattcatcaaatctattcaagttgaacccaataat
gttgtggcgtggaccaatcttggagcactttacctcgtccaaggcaaccaagaactagcc
caccaagccttcaagatagcccagtctttggagcctagctatgtacaatgttggattggg
caggctcttgttgctgagactattgtacgtgaagaggctatggacttattccgccataca
actgaactggccacccatagcgagggcgctgttggctatgctcattgggtatgcgagaca
ctactggactcatctctggatatgacatcacagctgtatcgttataacatcgttcagatg
aacgctgtctccctggcaactgtaggtcttgataaagtcacagatcggattcaaactgat
gcttgtgcacataccatgcatggattacttctggagaggcaaggtctgcacaaaagtgcc
tgcaaagcatttgcaagggcattggagctggtaaataacaaccgtaaccaggatgtcatg
agtatagcattggcaaattatgcaagaagtctatgctccgttggtcagtacgaggaagca
gtgaagcattttcagtcagtgacacctctgattagactggaggacatctgctgcttagca
ctgtctctctacaagacgggcaacctacaggccagctttcaggcttatgagcaagctctg
caattggctactgatggtttaattcggtctcaactgttgacgtgtctcggtatggtggca
ttccagtgtggggaccaggaccgaaccaaaacgttactcttccaaagttctcaggagtct
gagccgtctccagaaggtctcttagctctcttagcgctgggtgtgcaccttagcgacttc
acattagcagaggcagctgtgacggaactcaagaagttcaaggacaaacaaggcttcatt
gctgatgtgtcttttgcagggactgtgattcatgctcttaagggccaatatcacctagcg
tacagacaggttgcaaaggcaataagaagacatcctggactgcctgaactctggagactg
atggctgagattattcttcaacttataccagagaaagctcaggcagccgttaaatgcagt
catgcatccatacaagacaaaaaggctacaaagggttcagtttcagtgtatgccttggct
actctagcgatgggtctacacagcaagtctacacccaccagtcagaggtgtgtgaatgcc
gctcagaaagctgtccatctctacccagactcgctggagaactgggctgcactgagtgcc
agctatctgttacatggaatatggaactcagcgcagacacattctgagcacgtggaaaac
aacatggcgtccaagctggctacatttgtgcattcttggggtaaggagagtgaaaatgct
gcaattcagaaatggtcagcattacagattgttgttagtctactacatgaaggcaagata
gagagagcagatgcactcaccagaaagttggaggttgtgtatcagtcagatgccatcatg
aagtcaacgttacagcttctacaagcagaggcagtctgcatgcagcatgactcacatcaa
agtattgagttcctgaggagagtcataacgatgacctctcatcagtcatctgcagcgtgg
cagttattagccaagctgtatgagaaagaaggcatggtggctgcagcagagtcagcctac
aaacaaagtgtagtacactcacagcctgggcagcaggtggttccgtttctcagattggct
catctggctttaagagcagctacggtaagcagtgatgagcgatggttacttcttggactg
gaagcaactactgaagtcttgaagattataccacactgtgctatagctctgctactacag
ggacttctacaacatcataaaggcaatacaaggccttccaagagatgttttcagcaagtt
cttgccatctcctcggatgataagatgaatctcgctagatctgtggccagatttcacatg
attcagatcttattggacaagaaagatctcagttcagctcaggttctggttgacgaagct
gctcaagaaaatgatctcaaccttcaccagcttcaagatctcatgtctactgctcagtaa
DBGET
integrated database retrieval system
