Acipenser ruthenus (sterlet): 117398305
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Entry
117398305 CDS
T07327
Symbol
pabpn1
Name
(RefSeq) polyadenylate-binding protein 2 isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117398305 (pabpn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117398305 (pabpn1)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117398305 (pabpn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117398305
NCBI-ProteinID:
XP_033853182
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All DBs
Position
43:6376208..6393153
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AA seq
295 aa
AA seq
DB search
MAEYGNGLTEESMLDSDPGHPELEDPGAGDEDPGLEEGEAAIEDPELEAIKARVREMEEE
AEKLKELQNEVEKQMNLSPPPAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHG
CGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSMALDESLFRGRQIKVGAKRTNRPGI
STTDRGFPRARFRSRGTFSASRSRYYSGFTPPRGRGRAFRGRGRTSSWYQDQWRLSTPPP
PVAAAPPTVSAVSLSLSNPAMHHHTHPMLSVWGCGGGGQGDHRPAPGGLYYNNKR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacggtaacggtctcaccgaagagtcaatgctggattcagaccccggacac
ccggagcttgaagacccaggagccggcgacgaagaccccggccttgaggagggagaggcc
gccattgaagatccggagctggaagcgatcaaagctcgggttcgagagatggaggaggaa
gcagagaagctgaaggagcttcagaatgaggtggagaaacagatgaacctcagcccccct
ccagcaggtcctgtgatcatgtctttagaagagaagatggaggctgatgcccgatccatc
tatgtaggaaatgtggattacggggcgacagcagaggaactggaagctcattttcacggc
tgcggttctgtgaacagagtcacgatcctgtgtgacaagttcacaggccatcctaaaggg
tttgcctacattgaattttcggacaaggagtctgtccggacgtccatggcgcttgacgag
tccctcttcagaggacgacagatcaaggtgggagcgaagcggacaaaccggcccggaatc
agcaccacagaccggggatttcctagagctcgcttccgatcgcgagggaccttctccgcg
tcccgctcccgctactacagcggattcaccccccccagaggcaggggcagggccttcagg
ggccgtgggagaacatcatcctggtatcaggaccagtggagactgagcacccctcctcct
cctgtggctgcagcgccccctacagtgtcagcggtgtctctctctctctccaaccccgcc
atgcaccaccacactcaccccatgctgtctgtgtgggggtgcgggggaggggggcagggc
gatcacaggcccgcgccaggggggctgtattataacaacaagcgctga
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