Acipenser ruthenus (sterlet): 117408892
Help
Entry
117408892 CDS
T07327
Name
(RefSeq) heparanase-like isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut00531
Glycosaminoglycan degradation
arut01100
Metabolic pathways
Module
arut_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117408892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117408892
Enzymes [BR:
arut01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
117408892
Glycosaminoglycan binding proteins [BR:
arut00536
]
Heparan sulfate / Heparin
Enzymes
117408892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
117408892
NCBI-ProteinID:
XP_033870191
LinkDB
All DBs
Position
2:complement(30166757..30178879)
Genome browser
AA seq
518 aa
AA seq
DB search
MPVFEKEQFAVVNADLIHAERTVSDAFLSVAIDTNLVTEERYINLLGSQKLRTLAKGLAP
GYLRFGGTKADFMRFHTKEVATRQQAFSRQFGIKPGVCDRRPISPETEEYLKSEWVLQEE
LILMEEHQNHCSKLNISGSTVDMLYNFANCSGFHLIFGLNALLRTKTNTWNSSNAEELLN
YCQSKNYSMSWELGNEPNSFMKKSGIRIDGTQLGKDFVHLREILRRYKNFQDSGLYGPDV
GQPRDHTENLLEGFLETGGKVIDACTWHHYYVNGRDTSLSDFLSPEVLDSLATKTQEIFQ
VVNETVPGKKVWLGETSSAYGGGAPGLSDTYVAGFMWLDKLGLSARLGIDVVIRQVLVGA
GSYHLVDSNFDPLPDYWLSLLYKKLVGPKVLAATAFTHLGTESKLHRVYMHCTKSNSETS
GTGAVTVFALNLSKKTSTIHLPPLLSDKTVVLYLLEPAGEDGLHSRSVQLNGKVLKMVDD
TTLPVLTGIPLPVGSPLKLPALSFAFYVVKDANAPACR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtttgagaaagaacaatttgcagttgtaaacgctgatctaatacatgctgag
cgaacagtgagcgatgcttttctatcagtggctatagataccaacttggtcactgaagag
aggtacatcaaccttttgggctcacagaagctgcggacactagcaaaaggcctagctcct
gggtatttgagatttggtggaacaaaagcagacttcatgcgcttccacaccaaggaagtg
gcaacaagacaacaggcttttagcagacagtttggaatcaaaccaggtgtttgtgacaga
aggcccatttctcctgagacagaggaatatttgaagtcagagtgggtattgcaggaggaa
ctcatccttatggaggaacatcaaaatcattgttccaagctaaatatttcagggtctacc
gtggatatgttgtacaattttgccaattgttctgggtttcacttaatcttcggtttgaat
gccttactgagaactaaaactaatacctggaacagctccaatgctgaagaactcctcaac
tactgccagtcaaagaactacagcatgtcatgggaactgggcaatgagcctaatagcttt
atgaagaaatctggaatcagaattgacggcacccagttgggaaaggatttcgttcacctt
cgtgaaatcctcaggagatacaaaaacttccaagattctggactgtacggacctgatgtg
ggacagcctcgagaccacacagagaatctgctggaggggtttctggagacgggtgggaaa
gtcatagatgcttgcacctggcatcattactatgtgaatggaagagacacatccctgtca
gacttcctcagtcctgaggtgctggatagccttgctacaaagacccaagaaatctttcag
gtcgtcaatgagacagttccaggtaaaaaagtctggctgggagaaacaagttctgcctat
ggaggtggagcccctggattgtcggacacatacgttgctggcttcatgtggctagataaa
ctgggactctcagccagactgggcattgacgtggtcatcaggcaagttttggttggggct
ggatcttaccatttagttgattccaatttcgacccattgcctgactattggctgtctttg
ctatacaagaagctggttggccctaaggtgcttgctgctacagcgttcacccatctagga
acagaaagcaagcttcaccgtgtgtacatgcactgcaccaagagcaacagtgagacctct
gggacaggagctgtaacagtgtttgccttaaatctgagtaagaaaacatcaacaatccac
ctacctccactcttgtctgacaaaacagtcgtcctttacctcttagagcctgctggagaa
gatggcttacattcaaggtctgtgcagctgaatggaaaagtgttgaagatggtggatgac
acaacactgccagtcctgacagggatacccctacctgtgggaagccctctcaaactccca
gctctgtcctttgcattttatgtggtgaaagatgccaacgctcctgcatgtagataa
DBGET
integrated database retrieval system